List of works by Balazs Gyorffy

A Network-Based Target Overlap Score for Characterizing Drug Combinations: High Correlation with Cancer Clinical Trial Results

scientific article

A functional interplay between ZNF217 and estrogen receptor alpha exists in luminal breast cancers

scientific article

A genome-wide approach to link genotype to clinical outcome by utilizing next generation sequencing and gene chip data of 6,697 breast cancer patients.

scientific article

A meta-analysis of gene expression-based biomarkers predicting outcome after tamoxifen treatment in breast cancer

scientific article

A snapshot of microarray-generated gene expression signatures associated with ovarian carcinoma

scientific article published on 22 January 2008

ABCC2 (MRP2, cMOAT) localized in the nuclear envelope of breast carcinoma cells correlates with poor clinical outcome

scientific article published on 11 October 2011

APOBEC3B-Mediated Cytidine Deamination Is Required for Estrogen Receptor Action in Breast Cancer

scientific article

Acid ceramidase is associated with an improved prognosis in both DCIS and invasive breast cancer.

scientific article published on 31 July 2014

Association of PDCD1 and CTLA-4 Gene Expression with Clinicopathological Factors and Survival in Non-Small-Cell Lung Cancer: Results from a Large and Pooled Microarray Database

scientific article

Author Correction: Validation of miRNA prognostic power in hepatocellular carcinoma using expression data of independent datasets

scientific article published on 26 July 2018

BRCA Mutation-Related and Claudin-Low Breast Cancer: Blood Relatives or Stepsisters

scientific article published on 14 November 2015

Biomarkers for systemic therapy in ovarian cancer

scientific article published on March 2014

Brain protein expression changes in WAG/Rij rats, a genetic rat model of absence epilepsy after peripheral lipopolysaccharide treatment.

scientific article published on 8 September 2013

Combined Wnt/β-catenin, Met, and CXCL12/CXCR4 signals characterize basal breast cancer and predict disease outcome

scientific article published on 27 November 2013

Combined analysis of gene expression, DNA copy number, and mutation profiling data to display biological process anomalies in individual breast cancers.

scientific article

Correlations of differentially expressed gap junction connexins Cx26, Cx30, Cx32, Cx43 and Cx46 with breast cancer progression and prognosis

scientific article

Could tivozanib be a new potent pan-VEGF inhibitor in RCC therapy?

scientific article published in September 2012

Current composite-feature classification methods do not outperform simple single-genes classifiers in breast cancer prognosis.

scientific article

Cyclin-dependent kinase 8 mediates chemotherapy-induced tumor-promoting paracrine activities.

scientific article

Determining consistent prognostic biomarkers of overall survival and vascular invasion in hepatocellular carcinoma

scientific article published on 05 December 2018

Differential epigenetic reprogramming in response to specific endocrine therapies promotes cholesterol biosynthesis and cellular invasion

scientific article

Disruption of STAT3 signalling promotes KRAS-induced lung tumorigenesis

scientific article

Dynamic classification using case-specific training cohorts outperforms static gene expression signatures in breast cancer.

scientific article

Elafin drives poor outcome in high-grade serous ovarian cancers and basal-like breast tumors.

scientific article

Enhanced immunoreactivity of TIMP-2 in the stromal compartment of tumor as a marker of favorable prognosis in ovarian cancer patients.

scientific article

Epigenetic modulation of FOXM1-gene interacting network by BET inhibitors in breast cancer

scientific article published on 11 September 2018

Evaluation of microarray preprocessing algorithms based on concordance with RT-PCR in clinical samples

scientific article

Evaluation of transcriptionally regulated genes identifies NCOR1 in hormone receptor negative breast tumors and lung adenocarcinomas as a potential tumor suppressor gene

scientific article published in PLoS ONE

Examination of Hardy-Weinberg equilibrium in papers of Kidney International: an underused tool

scientific article published on 01 May 2004

Expression of MHC class I, HLA-A and HLA-B identifies immune-activated breast tumors with favorable outcome

scientific article published on 03 July 2019

Functional transcriptomic annotation and protein-protein interaction analysis identify EZH2 and UBE2C as key upregulated proteins in ovarian cancer.

scientific article published on 25 March 2018

Functional transcriptomics: an experimental basis for understanding the systems biology for cancer cells.

scientific article published on March 2007

Gender-specific association of vitamin D receptor polymorphism combinations with type 1 diabetes mellitus

scientific article published in December 2002

Gene Expression Indicates Altered Immune Modulation and Signaling Pathway Activation in Ovarian Cancer Patients Resistant to Topotecan

scientific article published on 05 June 2019

Gene expression based multigene prognostic and predictive tests in breast cancer

scientific article published in December 2009

Gene expression profiling of 30 cancer cell lines predicts resistance towards 11 anticancer drugs at clinically achieved concentrations.

scientific article published on April 2006

Gene signature of the metastatic potential of cutaneous melanoma: too much for too little?

scientific article published on 24 February 2010

Genetic mutational status of genes regulating epigenetics: Role of the histone methyltransferase KMT2D in triple negative breast tumors

article

Genomic Mapping Identifies Mutations in RYR2 and AHNAK as Associated with Favorable Outcome in Basal-Like Breast Tumors Expressing PD1/PD-L1

scientific article published on 11 August 2020

Glutamate enrichment as new diagnostic opportunity in breast cancer.

scientific article published on 4 September 2014

HOXB7 Is an ERα Cofactor in the Activation of HER2 and Multiple ER Target Genes Leading to Endocrine Resistance

scientific article

Helicobacter pylori and antrum erosion-specific gene expression patterns: the discriminative role of CXCL13 and VCAM1 transcripts.

scientific article

Identification of a claudin-4 and E-cadherin score to predict prognosis in breast cancer

scientific article published on 12 October 2011

Identification of consensus genes and key regulatory elements in 5-fluorouracil resistance in gastric and colon cancer

scientific article

Identifying Cancers Impacted by CDK8/19

scientific article published on 03 August 2019

Jetset: selecting the optimal microarray probe set to represent a gene

scientific article

Loss of estrogen receptor beta expression correlates with shorter overall survival and lack of clinical response to chemotherapy in ovarian cancer patients

scientific article published on February 2011

Lower risk for Down syndrome associated with longer oral contraceptive use: a case-control study of women of advanced maternal age presenting for prenatal diagnosis

scientific article published on 4 October 2012

Mapping Bromodomains in breast cancer and association with clinical outcome

scientific article published on 05 April 2019

Meta-analysis of gene expression profiles associated with histological classification and survival in 829 ovarian cancer samples.

scientific article

Meta-analysis of gene expression profiles related to relapse-free survival in 1,079 breast cancer patients.

scientific article published on 05 December 2008

Missed calculations and new conclusions: re-calculation of genotype distribution data published in Journal of Investigative Dermatology, 1998-2003

scientific article published on 01 March 2004

Mitotic read-out genes confer poor outcome in luminal A breast cancer tumors.

scientific article published on March 2017

Multigene prognostic tests in breast cancer: past, present, future

scientific article

Multivariate analysis of oestrogen receptor alpha, pS2, metallothionein and CD24 expression in invasive breast cancers.

scientific article published on August 2006

PSMB7 is associated with anthracycline resistance and is a prognostic biomarker in breast cancer

scientific article

Predicting the chance of relapse after tamoxifen treatment in breast cancer

scientific article published in January 2014

Prediction of doxorubicin sensitivity in breast tumors based on gene expression profiles of drug-resistant cell lines correlates with patient survival.

scientific article

RNA interference and its clinical applications

scientific article published in November 2007

Re-calculated Hardy-Weinberg values in papers published in Atherosclerosis between 1995 and 2003

scientific article published on 01 March 2004

Shp2 signaling suppresses senescence in PyMT-induced mammary gland cancer in mice

scientific article published in September 2015

Shp2 signaling suppresses senescence in PyMT-induced mammary gland cancer in mice.

scientific article published on 3 March 2015

Signal Transduction Pathways of TNAP: Molecular Network Analyses.

scientific article published on January 2015

Simplified, low-cost gene expression profiling for the prediction of outcome in breast cancer based on routine histologic specimens

scientific article published in April 2013

Single-nucleotide polymorphisms of VEGF gene are associated with risk of congenital valvuloseptal heart defects

article

Synaptic mitochondria: a brain mitochondria cluster with a specific proteome.

scientific article published on 14 March 2015

Systematic evaluation of the miRNA-ome and its downstream effects on mRNA expression identifies gastric cancer progression.

scientific article published in November 2010

TP53 mutation-correlated genes predict the risk of tumor relapse and identify MPS1 as a potential therapeutic kinase in TP53-mutated breast cancers.

scientific article published on 5 January 2014

The CIN4 chromosomal instability qPCR classifier defines tumor aneuploidy and stratifies outcome in grade 2 breast cancer.

scientific article

The Danubian Biobank Initiative: synchronizing the biobanking activities of the Danube universities

scientific article published on October 2007

The PI3K inhibitor LY294002 blocks drug export from resistant colon carcinoma cells overexpressing MRP1.

scientific article published on March 2006

Three mechanisms in the pathogenesis of pre-eclampsia suggested by over-represented transcription factor-binding sites detected with comparative promoter analysis.

scientific article

Transcriptome evolution from breast epithelial cells to basal-like tumors.

scientific article published on 8 December 2017

Transcriptomic immunologic signature associated with favorable clinical outcome in basal-like breast tumors

scientific article

Tumor-selective proteotoxicity of verteporfin inhibits colon cancer progression independently of YAP1

scientific article published on 6 October 2015

Type I IFN induces protein ISGylation to enhance cytokine expression and augments colonic inflammation

scientific article

Uncovering Potential Therapeutic Targets in Colorectal Cancer by Deciphering Mutational Status and Expression of Druggable Oncogenes

scientific article published on 14 July 2019

Use of Routinely Collected Amniotic Fluid for Whole-Genome Expression Analysis of Polygenic Disorders

article

Validation of miRNA prognostic power in hepatocellular carcinoma using expression data of independent datasets.

scientific article

Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation

scientific article published on 26 July 2021

[Identification of colorectal cancer, adenoma, and inflammatory bowel disease specific gene expression patterns using whole genomic oligonucleotide microarray system]

scientific article published on 01 November 2007

[Internet-based biobank-registers in Hungary]

scientific article published on 01 May 2007

[Next generation sequencing technologies (NGST) -- development and applications]

scientific article published on 01 January 2011

lnc00673 (ERRLR01) is a Prognostic Indicator of Overall Survival in Breast Cancer.

scientific article published on 10 August 2017

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