List of works - Mogens Sandø Lund

A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle

scientific article published on 18 April 2016

A 660-Kb deletion with antagonistic effects on fertility and milk production segregates at high frequency in Nordic Red cattle: additional evidence for the common occurrence of balancing selection in livestock

scientific article published in January 2014

A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations

article

A comparison of bivariate and univariate QTL mapping in livestock populations ⬇️

scientific article published on November 1, 2003

Accuracy of genomic prediction for growth and carcass traits in Chinese triple-yellow chickens

scientific article

Accuracy of genomic prediction using different models and response variables in the Nordic Red cattle population

scientific article published on 26 April 2013

Adding cows to the reference population makes a small dairy population competitive

scientific article published on 2 July 2014

Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication)

scientific article

Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication)

scientific article

Analyzes of genome-wide association follow-up study for calving traits in dairy cattle ⬇️

scientific article published on August 14, 2012

Assessment of the genomic prediction accuracy for feed efficiency traits in meat-type chickens

scientific article

Association analysis for feet and legs disorders with whole-genome sequence variants in 3 dairy cattle breeds

scientific article published on 22 June 2016

Association analysis for udder health based on SNP-panel and sequence data in Danish Holsteins

scientific article

Association analysis for udder index and milking speed with imputed whole-genome sequence variants in Nordic Holstein cattle

scientific article

Association analysis for young stock survival index with imputed whole-genome sequence variants in Nordic Holstein cattle

scientific article

Bootstrap study of genome-enabled prediction reliabilities using haplotype blocks across Nordic Red cattle breeds

scientific article published on 29 July 2015

Comparing power and precision of within-breed and multibreed genome-wide association studies of production traits using whole-genome sequence data for 5 French and Danish dairy cattle breeds

scientific article

Comparison between a sire model and an animal model for genetic evaluation of fertility traits in Danish Holstein population

scientific article published on August 2009

Comparison between genomic predictions using daughter yield deviation and conventional estimated breeding value as response variables ⬇️

scientific article published on December 1, 2010

Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection

scientific article

Comparison of analyses of the QTLMAS XII common dataset. II: genome-wide association and fine mapping

scientific article

Comparison of association mapping methods in a complex pedigreed population

scientific article published in July 2010

Comparison of different methods for imputing genome-wide marker genotypes in Swedish and Finnish Red Cattle

scientific article published on 16 May 2013

Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships

scientific article

Comparison of genomic predictions using genomic relationship matrices built with different weighting factors to account for locus-specific variances

scientific article published on 14 August 2014

Comparison of genomic predictions using medium-density (∼54,000) and high-density (∼777,000) single nucleotide polymorphism marker panels in Nordic Holstein and Red Dairy Cattle populations ⬇️

scientific article published on August 1, 2012

Comparison on genomic predictions using three GBLUP methods and two single-step blending methods in the Nordic Holstein population ⬇️

scientific article (publication date: 6 July 2012)

Confirmation and fine-mapping of clinical mastitis and somatic cell score QTL in Nordic Holstein cattle

scientific article published on 6 May 2013

Consistency of linkage disequilibrium between Chinese and Nordic Holsteins and genomic prediction for Chinese Holsteins using a joint reference population

scientific article published on 21 March 2013

Contribution of rare and low-frequency whole-genome sequence variants to complex traits variation in dairy cattle

scientific article

Detection and modelling of time-dependent QTL in animal populations

scientific article published on 27 February 2008

Detection of quantitative trait loci affecting lameness and leg conformation traits in Danish Holstein cattle

scientific article published in January 2007

Detection of quantitative trait loci in Danish Holstein cattle affecting clinical mastitis, somatic cell score, udder conformation traits, and assessment of associated effects on milk yield

scientific article published in October 2008

Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle

updated version of retracted paper

Effect of marker-data editing on the accuracy of genomic prediction

scientific article

Effects of Bos taurus autosome 9-located quantitative trait loci haplotypes on the disease phenotypes of dairy cows with experimentally induced Escherichia coli mastitis

scientific article

Estimating Additive and Non-Additive Genetic Variances and Predicting Genetic Merits Using Genome-Wide Dense Single Nucleotide Polymorphism Markers ⬇️

scientific article published on September 13, 2012

Estimation of (co)variances for genomic regions of flexible sizes: application to complex infectious udder diseases in dairy cattle ⬇️

scientific article published on July 6, 2012

Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds

scientific article published on 22 July 2015

Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data

scientific article

Fine mapping of quantitative trait loci for mastitis resistance on bovine chromosome 11.

scientific article published on 16 April 2009

Gene prioritization for livestock diseases by data integration

scientific article

Genetic analysis of days from calving to first insemination and days open in Danish Holsteins using different models and censoring scenarios

scientific article published on March 2009

Genetic correlations between pathogen-specific mastitis and somatic cell count in Danish Holsteins

scientific article published in July 2009

Genetic dissection of milk yield traits and mastitis resistance quantitative trait loci on chromosome 20 in dairy cattle

scientific article

Genetic evaluation for three-way crossbreeding

scientific article

Genetic parameters for pathogen-specific mastitis resistance in Danish Holstein Cattle

scientific article published on May 2009

Genome position specific priors for genomic prediction

scientific article

Genome scan detects quantitative trait loci affecting female fertility traits in Danish and Swedish Holstein cattle

scientific article published in May 2009

Genome wide association studies for body conformation traits in the Chinese Holstein cattle population

scientific article

Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins

scientific article

Genome-wide association analyses using a Bayesian approach for litter size and piglet mortality in Danish Landrace and Yorkshire pigs

scientific article

Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

scientific article

Genome-wide association mapping for female fertility traits in Danish and Swedish Holstein cattle

scientific article published in December 2010

Genome-wide association study for calving traits in Danish and Swedish Holstein cattle

scientific article published in January 2011

Genome-wide association study for longevity with whole-genome sequencing in 3 cattle breeds

scientific article published on 8 June 2016

Genomic Prediction Using Multi-trait Weighted GBLUP Accounting for Heterogeneous Variances and Covariances Across the Genome

Genomic prediction for Nordic Red Cattle using one-step and selection index blending ⬇️

scientific article published on February 1, 2012

Genomic prediction of genetic merit using LD-based haplotypes in the Nordic Holstein population

scientific article published on 23 December 2014

Genomic prediction using models with dominance and imprinting effects for backfat thickness and average daily gain in Danish Duroc pigs

scientific article published on 13 September 2016

Genomic prediction when some animals are not genotyped

scientific article

Genomic predictions across Nordic Holstein and Nordic Red using the genomic best linear unbiased prediction model with different genomic relationship matrices

scientific article published on 21 April 2014

Genomic predictions based on a joint reference population for the Nordic Red cattle breeds

scientific article published on 2 May 2014

Genomic selection for the improvement of antibody response to Newcastle disease and avian influenza virus in chickens

scientific article

Genomic selection strategies in a small dairy cattle population evaluated for genetic gain and profit

scientific article

Identification of genomic regions associated with female fertility in Danish Jersey using whole genome sequence data

scientific article

Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle

Impact of relationships between test and training animals and among training animals on reliability of genomic prediction

scientific article

Improvement in genetic evaluation of female fertility in dairy cattle using multiple-trait models including milk production traits

scientific article published on 4 December 2009

Improving genetic evaluation using a multitrait single-step genomic model for ability to resume cycling after calving, measured by activity tags in Holstein cows

scientific article published on 02 August 2017

Increasing imputation and prediction accuracy for Chinese Holsteins using joint Chinese-Nordic reference population

scientific article published on 6 August 2014

Integrating Sequence-based GWAS and RNA-Seq Provides Novel Insights into the Genetic Basis of Mastitis and Milk Production in Dairy Cattle

scientific article published on 30 March 2017

Introgression of Chinese haplotypes contributed to the improvement of Danish Duroc pigs

article

Joint analysis of quantitative trait loci for clinical mastitis and somatic cell score on five chromosomes in three Nordic dairy cattle breeds

scientific article published in November 2007

Local genealogies in a linear mixed model for genome-wide association mapping in complex pedigreed populations

scientific article

Loci associated with adult stature also affect calf birth survival in cattle

scientific article

Mapping of fertility traits in Finnish Ayrshire by genome-wide association analysis

scientific article published on 17 January 2011

MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle.

scientific article published on 19 June 2018

Model comparison on genomic predictions using high-density markers for different groups of bulls in the Nordic Holstein population

scientific article published on 6 May 2013

Multitrait fine mapping of quantitative trait loci using combined linkage disequilibria and linkage analysis.

scientific article

Multitrait quantitative trait Loci mapping for milk production traits in danish Holstein cattle

scientific article published in June 2006

Multivariate Bayesian analysis of Gaussian, right censored Gaussian, ordered categorical and binary traits using Gibbs sampling

scientific article published on March 2003

Novel harmful recessive haplotypes identified for fertility traits in Nordic Holstein cattle

scientific article

Overlapping chromosomal regions for fertility traits and production traits in the Danish Holstein population

scientific article published in November 2009

Pathogen-specific effects of quantitative trait loci affecting clinical mastitis and somatic cell count in Danish Holstein cattle

scientific article published in June 2008

Preliminary investigation on reliability of genomic estimated breeding values in the Danish Holstein population

scientific article published in March 2010

Prioritizing candidate genes post-GWAS using multiple sources of data for mastitis resistance in dairy cattle

article

Quantitative trait loci affecting calving traits in Danish Holstein cattle

scientific article

Quantitative trait loci for fertility traits in Finnish Ayrshire cattle

scientific article published on 27 February 2008

RETRACTED: Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle.

retracted scientific article

Reliabilities of genomic estimated breeding values in Danish Jersey ⬇️

scientific article published on May 1, 2012

Retraction Note: Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle

article

Review: How to improve genomic predictions in small dairy cattle populations

scientific article

SNP markers associated with body size and pelt length in American mink (Neovison vison)

Selection for increased number of piglets at d 5 after farrowing has increased litter size and reduced piglet mortality

scientific article

Selection of haplotype variables from a high-density marker map for genomic prediction

scientific article published in August 2015

Sharing reference data and including cows in the reference population improve genomic predictions in Danish Jersey

scientific article published on 2 September 2015

Short communication: Genotype imputation within and across Nordic cattle breeds ⬇️

scientific article published on August 29, 2012

Short communication: Improving accuracy of Jersey genomic evaluations in the United States and Denmark by sharing reference population bulls

scientific article published on 12 March 2015

Short communication: Improving accuracy of predicting breeding values in Brazilian Holstein population by adding data from Nordic and French Holstein populations

scientific article

Single-step genomic model improved reliability and reduced the bias of genomic predictions in Danish Jersey.

scientific article

Strategies for imputation to whole genome sequence using a single or multi-breed reference population in cattle

scientific article

The EADGENE Microarray Data Analysis Workshop (open access publication).

scientific article

The admixed population structure in Danish Jersey dairy cattle challenges accurate genomic predictions

scientific article published on 8 May 2013

The effect of using genealogy-based haplotypes for genomic prediction

scientific article

The efficiency of mapping of quantitative trait loci using cofactor analysis in half-sib design

scientific article published on 23 February 2006

The first draft reference genome of the American mink (Neovison vison).

scientific article

The importance of haplotype length and heritability using genomic selection in dairy cattle

scientific article published in February 2009

The patterns of genomic variances and covariances across genome for milk production traits between Chinese and Nordic Holstein populations

scientific article

Using Sequence Variants in Linkage Disequilibrium with Causative Mutations to Improve Across-Breed Prediction in Dairy Cattle: A Simulation Study

scientific article published on 17 June 2016

Validation of associations for female fertility traits in Nordic Holstein, Nordic Red and Jersey dairy cattle

scientific article published on 15 January 2014

Variance components and correlations of female fertility traits in Chinese Holstein population

scientific article

Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle

scientific article published on 13 July 2014

List of works by Mogens Sandø Lund

A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle

A 660-Kb deletion with antagonistic effects on fertility and milk production segregates at high frequency in Nordic Red cattle: additional evidence for the common occurrence of balancing selection in livestock

A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations

A comparison of bivariate and univariate QTL mapping in livestock populations ⬇️

Accuracy of genomic prediction for growth and carcass traits in Chinese triple-yellow chickens

Accuracy of genomic prediction using different models and response variables in the Nordic Red cattle population

Adding cows to the reference population makes a small dairy population competitive

Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication)

Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication)

Analyzes of genome-wide association follow-up study for calving traits in dairy cattle ⬇️

Assessment of the genomic prediction accuracy for feed efficiency traits in meat-type chickens

Association analysis for feet and legs disorders with whole-genome sequence variants in 3 dairy cattle breeds

Association analysis for udder health based on SNP-panel and sequence data in Danish Holsteins

Association analysis for udder index and milking speed with imputed whole-genome sequence variants in Nordic Holstein cattle

Association analysis for young stock survival index with imputed whole-genome sequence variants in Nordic Holstein cattle

Bootstrap study of genome-enabled prediction reliabilities using haplotype blocks across Nordic Red cattle breeds

Comparing power and precision of within-breed and multibreed genome-wide association studies of production traits using whole-genome sequence data for 5 French and Danish dairy cattle breeds

Comparison between a sire model and an animal model for genetic evaluation of fertility traits in Danish Holstein population

Comparison between genomic predictions using daughter yield deviation and conventional estimated breeding value as response variables ⬇️

Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection

Comparison of analyses of the QTLMAS XII common dataset. II: genome-wide association and fine mapping

Comparison of association mapping methods in a complex pedigreed population

Comparison of different methods for imputing genome-wide marker genotypes in Swedish and Finnish Red Cattle

Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships

Comparison of genomic predictions using genomic relationship matrices built with different weighting factors to account for locus-specific variances

Comparison of genomic predictions using medium-density (∼54,000) and high-density (∼777,000) single nucleotide polymorphism marker panels in Nordic Holstein and Red Dairy Cattle populations ⬇️

Comparison on genomic predictions using three GBLUP methods and two single-step blending methods in the Nordic Holstein population ⬇️

Confirmation and fine-mapping of clinical mastitis and somatic cell score QTL in Nordic Holstein cattle

Consistency of linkage disequilibrium between Chinese and Nordic Holsteins and genomic prediction for Chinese Holsteins using a joint reference population

Contribution of rare and low-frequency whole-genome sequence variants to complex traits variation in dairy cattle

Detection and modelling of time-dependent QTL in animal populations

Detection of quantitative trait loci affecting lameness and leg conformation traits in Danish Holstein cattle

Detection of quantitative trait loci in Danish Holstein cattle affecting clinical mastitis, somatic cell score, udder conformation traits, and assessment of associated effects on milk yield

Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle

Effect of marker-data editing on the accuracy of genomic prediction

Effects of Bos taurus autosome 9-located quantitative trait loci haplotypes on the disease phenotypes of dairy cows with experimentally induced Escherichia coli mastitis

Estimating Additive and Non-Additive Genetic Variances and Predicting Genetic Merits Using Genome-Wide Dense Single Nucleotide Polymorphism Markers ⬇️

Estimation of (co)variances for genomic regions of flexible sizes: application to complex infectious udder diseases in dairy cattle ⬇️

Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds

Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data

Fine mapping of quantitative trait loci for mastitis resistance on bovine chromosome 11.

Gene prioritization for livestock diseases by data integration

Genetic analysis of days from calving to first insemination and days open in Danish Holsteins using different models and censoring scenarios

Genetic correlations between pathogen-specific mastitis and somatic cell count in Danish Holsteins

Genetic dissection of milk yield traits and mastitis resistance quantitative trait loci on chromosome 20 in dairy cattle

Genetic evaluation for three-way crossbreeding

Genetic parameters for pathogen-specific mastitis resistance in Danish Holstein Cattle

Genome position specific priors for genomic prediction

Genome scan detects quantitative trait loci affecting female fertility traits in Danish and Swedish Holstein cattle

Genome wide association studies for body conformation traits in the Chinese Holstein cattle population

Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins

Genome-wide association analyses using a Bayesian approach for litter size and piglet mortality in Danish Landrace and Yorkshire pigs

Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

Genome-wide association mapping for female fertility traits in Danish and Swedish Holstein cattle

Genome-wide association study for calving traits in Danish and Swedish Holstein cattle

Genome-wide association study for longevity with whole-genome sequencing in 3 cattle breeds

Genomic Prediction Using Multi-trait Weighted GBLUP Accounting for Heterogeneous Variances and Covariances Across the Genome

Genomic prediction for Nordic Red Cattle using one-step and selection index blending ⬇️

Genomic prediction of genetic merit using LD-based haplotypes in the Nordic Holstein population

Genomic prediction using models with dominance and imprinting effects for backfat thickness and average daily gain in Danish Duroc pigs

Genomic prediction when some animals are not genotyped

Genomic predictions across Nordic Holstein and Nordic Red using the genomic best linear unbiased prediction model with different genomic relationship matrices

Genomic predictions based on a joint reference population for the Nordic Red cattle breeds

Genomic selection for the improvement of antibody response to Newcastle disease and avian influenza virus in chickens

Genomic selection strategies in a small dairy cattle population evaluated for genetic gain and profit

Identification of genomic regions associated with female fertility in Danish Jersey using whole genome sequence data

Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle

Impact of relationships between test and training animals and among training animals on reliability of genomic prediction

Improvement in genetic evaluation of female fertility in dairy cattle using multiple-trait models including milk production traits

Improving genetic evaluation using a multitrait single-step genomic model for ability to resume cycling after calving, measured by activity tags in Holstein cows

Increasing imputation and prediction accuracy for Chinese Holsteins using joint Chinese-Nordic reference population

Integrating Sequence-based GWAS and RNA-Seq Provides Novel Insights into the Genetic Basis of Mastitis and Milk Production in Dairy Cattle

Introgression of Chinese haplotypes contributed to the improvement of Danish Duroc pigs

Joint analysis of quantitative trait loci for clinical mastitis and somatic cell score on five chromosomes in three Nordic dairy cattle breeds

Local genealogies in a linear mixed model for genome-wide association mapping in complex pedigreed populations

Loci associated with adult stature also affect calf birth survival in cattle

Mapping of fertility traits in Finnish Ayrshire by genome-wide association analysis

MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle.

Model comparison on genomic predictions using high-density markers for different groups of bulls in the Nordic Holstein population