List of works - Anders Isaksson

450K-array analysis of chronic lymphocytic leukemia cells reveals global DNA methylation to be relatively stable over time and similar in resting and proliferative compartments

scientific article

A Comprehensive Analysis of Human Gene Expression Profiles Identifies Stromal Immunoglobulin C as a Compatible Prognostic Marker in Human Solid Tumors

article

Allelic imbalance in gene expression as a guide to cis-acting regulatory single nucleotide polymorphisms in cancer cells

scientific article published on 31 January 2007

Array-based genomic screening at diagnosis and during follow-up in chronic lymphocytic leukemia

scientific article

Bayesian detection of periodic mRNA time profiles without use of training examples

scientific article published on 9 February 2006

Behavioural and Brain Gene Expression Profiling in Pigs during Tail Biting Outbreaks - Evidence of a Tail Biting Resistant Phenotype

scientific article

Binding, internalization, and degradation of antiproliferative heparan sulfate by human embryonic lung fibroblasts

scientific article published on 01 March 1997

Brain gene expression differences are associated with abnormal tail biting behavior in pigs.

scientific article published on 7 December 2012

Characterization of an imatinib-sensitive subset of high-grade human glioma cultures

scientific article published on 20 March 2006

Characterization of the cytotoxic activity of the indoloquinoline alkaloid cryptolepine in human tumour cell lines and primary cultures of tumour cells from patients

scientific article

Characterization of the cytotoxic properties of the benzimidazole fungicides, benomyl and carbendazim, in human tumour cell lines and primary cultures of patient tumour cells

scientific article published in January 2010

Constitutional downregulation of SEMA5A expression in autism

scientific article

Different patterns of clonal evolution among different sarcoma subtypes followed for up to 25 years

scientific article published in Nature Communications

Differential genome-wide array-based methylation profiles in prognostic subsets of chronic lymphocytic leukemia

scientific article published on 6 November 2009

Discovery, scoring and utilization of human single nucleotide polymorphisms: a multidisciplinary problem

Distinct gene expression profiles in subsets of chronic lymphocytic leukemia expressing stereotyped IGHV4-34 B-cell receptors

scientific article

Distinct transcriptional control in major immunogenetic subsets of chronic lymphocytic leukemia exhibiting subset-biased global DNA methylation profiles

scientific article

External cross-validation for unbiased evaluation of protein family detectors: application to allergens.

scientific article published in December 2005

First International SNP Meeting at Skokloster, Sweden, August 1998. Enthusiasm mixed with scepticism about single-nucleotide polymorphism markers for dissecting complex disorders

scientific article published in January 1999

Four evolutionary trajectories underlie genetic intratumoral variation in childhood cancer

scientific article published on 04 June 2018

Gene Copy Number Aberrations Are Associated with Survival in Histologic Subgroups of Non-small Cell Lung Cancer

article

Gene expression analysis identifies a genetic signature potentially associated with response to alpha-IFN in chronic phase CML patients.

scientific article published on 4 January 2007

High-density screening reveals a different spectrum of genomic aberrations in chronic lymphocytic leukemia patients with 'stereotyped' IGHV3-21 and IGHV4-34 B-cell receptors

scientific article

High-resolution genomic screening in mantle cell lymphoma--specific changes correlate with genomic complexity, the proliferation signature and survival

scientific article published in February 2011

Improved variance estimation of classification performance via reduction of bias caused by small sample size

scientific article published on 13 March 2006

Improving Bayesian credibility intervals for classifier error rates using maximum entropy empirical priors

scientific article published on 27 March 2010

In vitro drug sensitivity-gene expression correlations involve a tissue of origin dependency.

scientific article published on January 2007

Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer

scientific article published on 27 January 2015

L-iduronate-rich glycosaminoglycans inhibit growth of normal fibroblasts independently of serum or added growth factors

scientific article published on May 1993

Large but not small copy-number alterations correlate to high-risk genomic aberrations and survival in chronic lymphocytic leukemia: a high-resolution genomic screening of newly diagnosed patients

scientific article published on 10 September 2009

Loss-of-heterozygosity on chromosome 19q in early-stage serous ovarian cancer is associated with recurrent disease ⬇️

scientific article published on September 12, 2012

Mantle cell lymphoma displays a homogenous methylation profile: a comparative analysis with chronic lymphocytic leukemia

scientific article

Molecular markers for discrimination of benign and malignant follicular thyroid tumors

scientific article published on 2 May 2006

Mutation, methylation, and gene expression profiles in dup(1q)-positive pediatric B-cell precursor acute lymphoblastic leukemia.

scientific article published on 12 March 2018

Next generation RNA-sequencing in prognostic subsets of chronic lymphocytic leukemia

scientific article published on 3 June 2012

PCR-generated padlock probes detect single nucleotide variation in genomic DNA.

scientific article published on June 2000

Patchwork: allele-specific copy number analysis of whole-genome sequenced tumor tissue.

scientific article

Pharmacological profiling of disulfiram using human tumor cell lines and human tumor cells from patients

scientific article

Phenotype-based screening of mechanistically annotated compounds in combination with gene expression and pathway analysis identifies candidate drug targets in a human squamous carcinoma cell model

scientific article published in August 2006

Prostasomal DNA characterization and transfer into human sperm ⬇️

scientific article published on June 2, 2011

Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer samples using SNP array data

scientific article (publication date: 26 June 2009)

Revealing cell cycle control by combining model-based detection of periodic expression with novel cis-regulatory descriptors

scientific article

Screening for copy-number alterations and loss of heterozygosity in chronic lymphocytic leukemia--a comparative study of four differently designed, high resolution microarray platforms

scientific article published on 01 August 2008

Screening of an annotated compound library for drug activity in a resistant myeloma cell line

scientific article

Stathmin as a marker for malignancy in pheochromocytomas

scientific article published on 15 May 2009

Synergistic interactions between camptothecin and EGFR or RAC1 inhibitors and between imatinib and Notch signaling or RAC1 inhibitors in glioblastoma cell lines ⬇️

scientific article published on June 5, 2013

The deubiquitination enzyme fat facets negatively regulates RTK/Ras/MAPK signalling during Drosophila eye development.

scientific article published in November 1997

The transcriptome of the adenovirus infected cell

scientific article

List of works by Anders Isaksson

450K-array analysis of chronic lymphocytic leukemia cells reveals global DNA methylation to be relatively stable over time and similar in resting and proliferative compartments

A Comprehensive Analysis of Human Gene Expression Profiles Identifies Stromal Immunoglobulin C as a Compatible Prognostic Marker in Human Solid Tumors

Allelic imbalance in gene expression as a guide to cis-acting regulatory single nucleotide polymorphisms in cancer cells

Array-based genomic screening at diagnosis and during follow-up in chronic lymphocytic leukemia

Bayesian detection of periodic mRNA time profiles without use of training examples

Behavioural and Brain Gene Expression Profiling in Pigs during Tail Biting Outbreaks - Evidence of a Tail Biting Resistant Phenotype

Binding, internalization, and degradation of antiproliferative heparan sulfate by human embryonic lung fibroblasts

Brain gene expression differences are associated with abnormal tail biting behavior in pigs.

Characterization of an imatinib-sensitive subset of high-grade human glioma cultures

Characterization of the cytotoxic activity of the indoloquinoline alkaloid cryptolepine in human tumour cell lines and primary cultures of tumour cells from patients

Characterization of the cytotoxic properties of the benzimidazole fungicides, benomyl and carbendazim, in human tumour cell lines and primary cultures of patient tumour cells

Constitutional downregulation of SEMA5A expression in autism

Different patterns of clonal evolution among different sarcoma subtypes followed for up to 25 years

Differential genome-wide array-based methylation profiles in prognostic subsets of chronic lymphocytic leukemia

Discovery, scoring and utilization of human single nucleotide polymorphisms: a multidisciplinary problem

Distinct gene expression profiles in subsets of chronic lymphocytic leukemia expressing stereotyped IGHV4-34 B-cell receptors

Distinct transcriptional control in major immunogenetic subsets of chronic lymphocytic leukemia exhibiting subset-biased global DNA methylation profiles

External cross-validation for unbiased evaluation of protein family detectors: application to allergens.

First International SNP Meeting at Skokloster, Sweden, August 1998. Enthusiasm mixed with scepticism about single-nucleotide polymorphism markers for dissecting complex disorders

Four evolutionary trajectories underlie genetic intratumoral variation in childhood cancer

Gene Copy Number Aberrations Are Associated with Survival in Histologic Subgroups of Non-small Cell Lung Cancer

Gene expression analysis identifies a genetic signature potentially associated with response to alpha-IFN in chronic phase CML patients.

High-density screening reveals a different spectrum of genomic aberrations in chronic lymphocytic leukemia patients with 'stereotyped' IGHV3-21 and IGHV4-34 B-cell receptors

High-resolution genomic screening in mantle cell lymphoma--specific changes correlate with genomic complexity, the proliferation signature and survival

Improved variance estimation of classification performance via reduction of bias caused by small sample size

Improving Bayesian credibility intervals for classifier error rates using maximum entropy empirical priors

In vitro drug sensitivity-gene expression correlations involve a tissue of origin dependency.

Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer

L-iduronate-rich glycosaminoglycans inhibit growth of normal fibroblasts independently of serum or added growth factors

Large but not small copy-number alterations correlate to high-risk genomic aberrations and survival in chronic lymphocytic leukemia: a high-resolution genomic screening of newly diagnosed patients

Loss-of-heterozygosity on chromosome 19q in early-stage serous ovarian cancer is associated with recurrent disease ⬇️

Mantle cell lymphoma displays a homogenous methylation profile: a comparative analysis with chronic lymphocytic leukemia

Molecular markers for discrimination of benign and malignant follicular thyroid tumors

Mutation, methylation, and gene expression profiles in dup(1q)-positive pediatric B-cell precursor acute lymphoblastic leukemia.

Next generation RNA-sequencing in prognostic subsets of chronic lymphocytic leukemia

PCR-generated padlock probes detect single nucleotide variation in genomic DNA.

Patchwork: allele-specific copy number analysis of whole-genome sequenced tumor tissue.

Pharmacological profiling of disulfiram using human tumor cell lines and human tumor cells from patients

Phenotype-based screening of mechanistically annotated compounds in combination with gene expression and pathway analysis identifies candidate drug targets in a human squamous carcinoma cell model

Prostasomal DNA characterization and transfer into human sperm ⬇️

Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer samples using SNP array data

Revealing cell cycle control by combining model-based detection of periodic expression with novel cis-regulatory descriptors

Screening for copy-number alterations and loss of heterozygosity in chronic lymphocytic leukemia--a comparative study of four differently designed, high resolution microarray platforms

Screening of an annotated compound library for drug activity in a resistant myeloma cell line

Stathmin as a marker for malignancy in pheochromocytomas

Synergistic interactions between camptothecin and EGFR or RAC1 inhibitors and between imatinib and Notch signaling or RAC1 inhibitors in glioblastoma cell lines ⬇️

The deubiquitination enzyme fat facets negatively regulates RTK/Ras/MAPK signalling during Drosophila eye development.

The transcriptome of the adenovirus infected cell