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Authors whose works are in public domain in at least one jurisdiction

List of works by Rosalind J Allen

1-50 of 60 results

Challenges in microbial ecology: building predictive understanding of community function and dynamics

scientific article published on 29 March 2016

Simulating rare events in equilibrium or nonequilibrium stochastic systems.

scientific article

Forward flux sampling for rare event simulations

scientific article published on 26 October 2009

Role of Multicellular Aggregates in Biofilm Formation

scientific article published on 22 March 2016

Sampling Rare Switching Events in Biochemical Networks

scientific article published in Physical Review Letters

Forward flux sampling-type schemes for simulating rare events: Efficiency analysis

article

Effects of macromolecular crowding on genetic networks

scientific article

Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling

scientific article published on 01 September 2007

Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells

scientific article published in Physical Review Letters

Community history affects the predictability of microbial ecosystem development.

scientific article

The role of mechanical forces in the planar-to-bulk transition in growing Escherichia coli microcolonies.

scientific article published on August 2014

Intermittent Permeation of Cylindrical Nanopores by Water

scientific article published in Physical Review Letters

DNA looping provides stability and robustness to the bacteriophage lambda switch

scholarly article

Continuum Theory of Phase Separation Kinetics for Active Brownian Particles

scientific article published in Physical Review Letters

Electric field-controlled water permeation coupled to ion transport through a nanopore

scientific article published on 01 March 2004

Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates.

scientific article

Reaction coordinates for the flipping of genetic switches

scientific article published on 25 January 2008

Mixed population of competing totally asymmetric simple exclusion processes with a shared reservoir of particles

scientific article published on 27 January 2012

Scalar φ4 field theory for active-particle phase separation

scientific article published in Nature Communications

Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers

scientific article

Competition for space during bacterial colonization of a surface

scientific article

Homogeneous nucleation under shear in a two-dimensional Ising model: cluster growth, coalescence, and breakup

scientific article published in October 2008

The Pseudomonas aeruginosa PSL Polysaccharide Is a Social but Noncheatable Trait in Biofilms.

scientific article

Eliminating fast reactions in stochastic simulations of biochemical networks: a bistable genetic switch

scientific article published in January 2008

Phase behaviour of active Brownian particles: the role of dimensionality

scientific article published on 01 March 2014

Switching and growth for microbial populations in catastrophic responsive environments

scientific article

Inherent Variability in the Kinetics of Autocatalytic Protein Self-Assembly

scientific article published in Physical Review Letters

Lower glycolysis carries a higher flux than any biochemically possible alternative

scientific article

Competition between primary nucleation and autocatalysis in amyloid fibril self-assembly.

scientific article published on February 2015

Genes required for growth at high hydrostatic pressure in Escherichia coli K-12 identified by genome-wide screening.

scientific article

A multipurpose modular system for high-resolution microscopy at high hydrostatic pressure.

scientific article

Antibiotic resistance: a physicist's view

scientific article published on 11 August 2016

Steady-state parameter sensitivity in stochastic modeling via trajectory reweighting.

scientific article published in March 2012

Non-stationary forward flux sampling

scientific article published on 01 May 2012

Exact solution of a model DNA-inversion genetic switch with orientational control.

scientific article published on 11 September 2008

Electrostatic potential inside ionic solutions confined by dielectrics: a variational approach

Molecular dynamics investigation of water permeation through nanopores

article

Statistical physics of a model binary genetic switch with linear feedback

scientific article published on 30 March 2009

Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates.

scientific article published on 21 August 2012

Automatic, optimized interface placement in forward flux sampling simulations.

scientific article published in April 2013

Kinetic models of ion transport through a nanopore.

scientific article published on 31 August 2004

Dynamical Phase Transition in a Model for Evolution with Migration

scientific article published in Physical Review Letters

Microbial population dynamics and evolution: a statistical physicist's guide

article

A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining

scientific article published on May 2015

Non-equilibrium dynamics of an active colloidal "chucker".

scientific article published in May 2010

Speed of invasion of an expanding population by a horizontally transmitted trait.

scientific article published on 2 December 2013

Computing the local pressure in molecular dynamics simulations

scientific article published on 27 June 2012

Permeation of nanopores by water: the effects of channel polarization

Malliavin weight sampling for computing sensitivity coefficients in Brownian dynamics simulations.

scientific article

Osmosis in a minimal model system

scientific article published on 01 December 2012