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List of works by Rosalind J Allen

A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining

scientific article published on May 2015

A multipurpose modular system for high-resolution microscopy at high hydrostatic pressure.

scientific article

Antibiotic resistance: a physicist's view ⬇️

scientific article published on 11 August 2016

Automatic, optimized interface placement in forward flux sampling simulations.

scientific article published in April 2013

C12E2Reverse Micelle: A Molecular Dynamics Study

Calcium Sensitive Fluorescent Dyes Fluo-4 and Fura Red under Pressure: Behaviour of Fluorescence and Buffer Properties under Hydrostatic Pressures up to 200 MPa

scientific article

Challenges in microbial ecology: building predictive understanding of community function and dynamics ⬇️

scientific article published on 29 March 2016

Community history affects the predictability of microbial ecosystem development.

scientific article

Competition between primary nucleation and autocatalysis in amyloid fibril self-assembly.

scientific article published on February 2015

Competition for space during bacterial colonization of a surface

scientific article

Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling

scientific article published on 01 September 2007

Computing the local pressure in molecular dynamics simulations

scientific article published on 27 June 2012

Continuum Theory of Phase Separation Kinetics for Active Brownian Particles

scientific article published in Physical Review Letters

DNA looping provides stability and robustness to the bacteriophage lambda switch

scholarly article

Density functional approach to the effective interaction between charges within dielectric cavities

Dynamical Phase Transition in a Model for Evolution with Migration

scientific article published in Physical Review Letters

Effects of macromolecular crowding on genetic networks

scientific article

Electric field-controlled water permeation coupled to ion transport through a nanopore

scientific article published on 01 March 2004

Electrostatic interactions of charges and dipoles near a polarizable membrane

Electrostatic potential inside ionic solutions confined by dielectrics: a variational approach

Eliminating fast reactions in stochastic simulations of biochemical networks: a bistable genetic switch

scientific article published in January 2008

Exact solution of a model DNA-inversion genetic switch with orientational control.

scientific article published on 11 September 2008

Forward flux sampling for rare event simulations

scientific article published on 26 October 2009

Forward flux sampling-type schemes for simulating rare events: Efficiency analysis

article

Genes required for growth at high hydrostatic pressure in Escherichia coli K-12 identified by genome-wide screening.

scientific article

Growth-dependent drug susceptibility can prevent or enhance spatial expansion of a bacterial population

scientific article published on 23 April 2019

Homogeneous nucleation under shear in a two-dimensional Ising model: cluster growth, coalescence, and breakup

scientific article published in October 2008

Inherent Variability in the Kinetics of Autocatalytic Protein Self-Assembly ⬇️

scientific article published in Physical Review Letters

Intermittent Permeation of Cylindrical Nanopores by Water

scientific article published in Physical Review Letters

Kinetic models of ion transport through a nanopore.

scientific article published on 31 August 2004

Lower glycolysis carries a higher flux than any biochemically possible alternative ⬇️

scientific article

Malliavin Weight Sampling: A Practical Guide

Malliavin weight sampling for computing sensitivity coefficients in Brownian dynamics simulations.

scientific article

Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers

scientific article

Microbial population dynamics and evolution: a statistical physicist's guide

article

Mixed population of competing totally asymmetric simple exclusion processes with a shared reservoir of particles

scientific article published on 27 January 2012

Molecular dynamics investigation of water permeation through nanopores

article

Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells ⬇️

scientific article published in Physical Review Letters

Non-equilibrium dynamics of an active colloidal "chucker".

scientific article published in May 2010

Non-stationary forward flux sampling

scientific article published on 01 May 2012

Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates.

scientific article published on 21 August 2012

Osmosis in a minimal model system

scientific article published on 01 December 2012

Permeation of nanopores by water: the effects of channel polarization

Phase behaviour of active Brownian particles: the role of dimensionality

scientific article published on 01 March 2014

Phenotypic delay in the evolution of bacterial antibiotic resistance: Mechanistic models and their implications

scientific article published on 29 May 2020

Reaction coordinates for the flipping of genetic switches

scientific article published on 25 January 2008

Resource spectrum engineering by specialist species can shift the specialist-generalist balance

scientific article published in 2019

Role of Multicellular Aggregates in Biofilm Formation

scientific article published on 22 March 2016

Sampling Rare Switching Events in Biochemical Networks

scientific article published in Physical Review Letters

Scalar φ4 field theory for active-particle phase separation

scientific article published in Nature Communications

Sedimentation equilibria of colloidal hard rod dispersions

Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates. ⬇️

scientific article

Simulating rare events in equilibrium or nonequilibrium stochastic systems.

scientific article

Speed of invasion of an expanding population by a horizontally transmitted trait.

scientific article published on 2 December 2013

Stability of β-lactam antibiotics in bacterial growth media

scientific article published on 20 July 2020

Statistical physics of a model binary genetic switch with linear feedback

scientific article published on 30 March 2009

Steady-state parameter sensitivity in stochastic modeling via trajectory reweighting.

scientific article published in March 2012

Switching and growth for microbial populations in catastrophic responsive environments

scientific article

The Pseudomonas aeruginosa PSL Polysaccharide Is a Social but Noncheatable Trait in Biofilms.

scientific article

The role of mechanical forces in the planar-to-bulk transition in growing Escherichia coli microcolonies.

scientific article published on August 2014

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