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List of works by Julie Klein

A capillary electrophoresis coupled to mass spectrometry pipeline for long term comparable assessment of the urinary metabolome

scientific article published on 03 October 2016

A nest in renal fibrosis?

scientific article published on 01 August 2007

Assessment of metabolomic and proteomic biomarkers in detection and prognosis of progression of renal function in chronic kidney disease

scientific article

Blockade of the kinin B1 receptor ameloriates glomerulonephritis

scientific article

Clinical proteomics in obstetrics and neonatology

scientific article published on 03 January 2014

Combination of the fetal urinary metabolome and peptidome for the prediction of postnatal renal outcome in fetuses with PUV

Comparative Analysis of Label-Free and 8-Plex iTRAQ Approach for Quantitative Tissue Proteomic Analysis

scientific article

Comparison of CE-MS/MS and LC-MS/MS sequencing demonstrates significant complementarity in natural peptide identification in human urine

scientific article published on 20 November 2013

Comparison of Urine and Plasma Peptidome Indicates Selectivity in Renal Peptide Handling

article by Pedro Magalhães et al published 23 April 2018 in Proteomics - Clinical Applications

Comparison of higher energy collisional dissociation and collision-induced dissociation MS/MS sequencing methods for identification of naturally occurring peptides in human urine

scientific article published on June 2015

Congenital ureteropelvic junction obstruction: human disease and animal models

scientific article published on 30 July 2010

Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature.

scientific article

Delayed Treatment with Plasminogen Activator Inhibitor-1 Decoys Reduces Tubulointerstitial Fibrosis

Delayed blockade of the kinin B1 receptor reduces renal inflammation and fibrosis in obstructive nephropathy

scientific article published on 22 September 2008

Discovery and validation of urinary biomarkers for detection of renal cell carcinoma

scientific article published on 25 December 2013

Dual effect of chemokine CCL7/MCP-3 in the development of renal tubulointerstitial fibrosis.

scientific article

EndoProteoFASP as a Tool to Unveil the Peptidome-Protease Profile: Application to Salivary Diagnostics

scientific article published in January 2018

Epidermal growth factor and kidney disease: a long-lasting story

scientific article published in May 2016

Evaluation of the Zucker diabetic fatty (ZDF) rat as a model for human disease based on urinary peptidomic profiles

scientific article

FP279HIGH-RESOLUTION PLASMA PROTEOME ANALYSIS IDENTIFIES NEW CHANGES IN MOLECULAR MECHANISMS INVOLVED IN CHRONIC KIDNEY DISEASE

FP303POSSIBLE ROLE OF MIRNAS IN OBSTRUCTIVE NEPHROPATHY

Fetal Urinary Peptides to Predict Postnatal Outcome of Renal Disease in Fetuses with Posterior Urethral Valves (PUV)

Identification of Symptomatic Fetuses Infected with Cytomegalovirus Using Amniotic Fluid Peptide Biomarkers

scientific article published on 25 January 2016

Identification of ageing-associated naturally occurring peptides in human urine

scientific article published on 29 September 2015

Identification of urinary peptide biomarkers associated with rheumatoid arthritis

scientific article

Increased urinary lysophosphatidic acid in mouse with subtotal nephrectomy: potential involvement in chronic kidney disease

scientific article published on 17 September 2016

Increased urine acylcarnitines in diabetic ApoE-/- mice: Hydroxytetradecadienoylcarnitine (C14:2-OH) reflects diabetic nephropathy in a context of hyperlipidemia

scientific article published on 7 April 2017

Kinin B1 receptor antagonism is equally efficient as angiotensin receptor 1 antagonism in reducing renal fibrosis in experimental obstructive nephropathy, but is not additive

scientific article

LPA1 receptor activation promotes renal interstitial fibrosis

scientific article published on 14 November 2007

La fibrose tubulo-interstitielle rénale

article published in 2011

Label-free quantitative urinary proteomics identifies the arginase pathway as a new player in congenital obstructive nephropathy

scientific article

Ldlr and ApoE mice better mimic the human metabolite signature of increased carotid intima media thickness compared to other animal models of cardiovascular disease

Long term metabolic syndrome induced by a high fat high fructose diet leads to minimal renal injury in C57BL/6 mice

scientific article (publication date: 2013)

Lysophosphatidic acid and renal fibrosis.

scientific article published on 11 April 2008

Lysophosphatidic acid-1-receptor targeting agents for fibrosis.

scientific article published on 24 March 2011

New insights in molecular mechanisms involved in chronic kidney disease using high-resolution plasma proteome analysis

scientific article

Omics databases on kidney disease: where they can be found and how to benefit from them

scientific article

Populous: a tool for building OWL ontologies from templates

scientific article

Prediction of Proteases Involved in Peptide Generation

scientific article published in January 2017

Proteasix: a tool for automated and large-scale prediction of proteases involved in naturally occurring peptide generation

scientific article

Proteomics of vitreous humor of patients with exudative age-related macular degeneration

scientific article

Renal fibrosis: insight from proteomics in animal models and human disease

scientific article published on 13 January 2011

Renal gene expression profiling using kinin B1 and B2 receptor knockout mice reveals comparable modulation of functionally related genes

article

Renal tubular fluid shear stress facilitates monocyte activation toward inflammatory macrophages

scientific article

Renal tubular fluid shear stress promotes endothelial cell activation

scientific article published in 2011

Renal urinary shear stress: a novel actor in nephropathies

scientific article

Reviewing Mechanistic Peptidomics in Body Fluids Focusing on Proteases

scientific article published on 01 September 2018

Systems biology combining human- and animal-data miRNA and mRNA data identifies new targets in ureteropelvic junction obstruction

scientific article

The KUPKB: a novel Web application to access multiomics data on kidney disease

scientific article

The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases

scientific article

The Proteasix Ontology

scientific article

The application of multi-omics and systems biology to identify therapeutic targets in chronic kidney disease

scientific article

The role of urinary peptidomics in kidney disease research

scientific article published on 14 January 2016

Toward the definition of a peptidome signature and protease profile in chronic periodontitis

scientific article published on 8 February 2015

Unveiling antimicrobial peptide-generating human proteases using PROTEASIX.

scientific article

Urinary Peptide Analysis Differentiates Pancreatic Cancer From Chronic Pancreatitis

article

Urinary peptidomics analysis reveals proteases involved in diabetic nephropathy.

scientific article published on 9 November 2017

Urinary peptidomics provides a noninvasive humanized readout of diabetic nephropathy in mice

scientific article published on 12 August 2016

Urinary proteomics and molecular determinants of chronic kidney disease: possible link to proteases

scientific article

Urinary proteomics based on capillary electrophoresis-coupled mass spectrometry in kidney disease: discovery and validation of biomarkers, and clinical application

scientific article

Urine peptidome analysis predicts risk of end-stage renal disease and reveals proteolytic pathways involved in autosomal dominant polycystic kidney disease progression

scientific article published on 5 July 2016

miRNAs in urine: a mirror image of kidney disease?

scientific article published on 08 February 2015

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