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List of works by Ruifu Yang

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A metagenome-wide association study of gut microbiota in type 2 diabetes

scientific article (publication date: 4 October 2012)
Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4

scientific article
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

scientific article published in December 2010
Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance

scientific article published on September 1, 2013
Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota

scientific article
Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis

scientific article published on 27 December 2012
A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates

scientific article published on 21 March 2007
Complete Genome Sequence of Yersinia pestis Strain 91001, an Isolate Avirulent to Humans

scientific article
Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera

scientific article
MicroRNAs: novel regulators during the immune response.

scientific article published on March 2009
Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus

scientific article
Dynamic reassortments and genetic heterogeneity of the human-infecting influenza A (H7N9) virus

scientific article published on January 2014
An investigation of transmission control measures during the first 50 days of the COVID-19 epidemic in China

scientific article published on 31 March 2020
Insight into microevolution of Yersinia pestis by clustered regularly interspaced short palindromic repeats

scientific article
Novel Plasmid and Its Variant Harboring both a bla NDM-1 Gene and Type IV Secretion System in Clinical Isolates of Acinetobacter lwoffii

scientific article published on January 30, 2012
Involvement of the post-transcriptional regulator Hfq in Yersinia pestis virulence

scientific article
Avian influenza H5N1 viral and bird migration networks in Asia

scientific article
Smad4 is required for maintaining normal murine postnatal bone homeostasis

scientific article published on 05 June 2007
Characterization of the 3a protein of SARS-associated coronavirus in infected vero E6 cells and SARS patients

scientific article published in July 2004
Identification of an HLA-A*0201-restricted CD8+ T-cell epitope SSp-1 of SARS-CoV spike protein

scientific article published on 11 March 2004
DNA microarray analysis of genome dynamics in Yersinia pestis: insights into bacterial genome microevolution and niche adaptation.

scientific article published in August 2004
Protein microarray for profiling antibody responses to Yersinia pestis live vaccine

scientific article
The iron-responsive Fur regulon in Yersinia pestis

scientific article published on 15 February 2008
Influenza H7N9 and H9N2 viruses: coexistence in poultry linked to human H7N9 infection and genome characteristics

scientific article published on 08 January 2014
Microarray analysis of temperature-induced transcriptome of Yersinia pestis

scientific article published on January 2004
Genetic and functional dissection of HTRA1 and LOC387715 in age-related macular degeneration

scientific article
Identification of Staphylococcus aureus and determination of its methicillin resistance by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

scientific article
The cyclic AMP receptor protein, CRP, is required for both virulence and expression of the minimal CRP regulon in Yersinia pestis biovar microtus.

scientific article published on 18 August 2008
Insight into Bacterial Virulence Mechanisms against Host Immune Response via the Yersinia pestis-Human Protein-Protein Interaction Network

scientific article published on September 12, 2011
Genotyping and phylogenetic analysis of Yersinia pestis by MLVA: insights into the worldwide expansion of Central Asia plague foci

scientific article
Th17 cell induction and immune regulatory effects.

scientific article published on May 2007
Global analysis of iron assimilation and fur regulation in Yersinia pestis

scientific article published on May 2006
Characterization of Zur-dependent genes and direct Zur targets in Yersinia pestis

scientific article published on 25 June 2009
Assessment of immunoreactive synthetic peptides from the structural proteins of severe acute respiratory syndrome coronavirus

scientific article published in December 2003
Antigenicity analysis of different regions of the severe acute respiratory syndrome coronavirus nucleocapsid protein

scientific article
Antibody responses to individual proteins of SARS coronavirus and their neutralization activities

scientific article
Different region analysis for genotyping Yersinia pestis isolates from China

scientific article
A complete sequence and comparative analysis of a SARS-associated virus (Isolate BJ01)

scientific article published on 01 January 2003
Molecular and physiological insights into plague transmission, virulence and etiology

scientific article
Response of memory CD8+ T cells to severe acute respiratory syndrome (SARS) coronavirus in recovered SARS patients and healthy individuals

scientific article published in July 2005
Epidemic Clones, Oceanic Gene Pools, and Eco-LD in the Free Living Marine Pathogen Vibrio parahaemolyticus

scientific article
Targeting S1P1 Receptor Protects against Murine Immunological Hepatic Injury through Myeloid-Derived Suppressor Cells

scientific article published on February 24, 2014
Transcriptome analysis of the Mg2+-responsive PhoP regulator in Yersinia pestis

scientific article published on September 2005
Determination of sRNA expressions by RNA-seq in Yersinia pestis grown in vitro and during infection

scientific article
Universal sample preparation method for characterization of bacteria by matrix-assisted laser desorption ionization-time of flight mass spectrometry

scientific article published on 2 February 2007
Analysis of the three Yersinia pestis CRISPR loci provides new tools for phylogenetic studies and possibly for the investigation of ancient DNA.

scientific article published on January 2007
Rapid detection of Bacillus anthracis using monoclonal antibody functionalized QCM sensor.

scientific article published on 13 August 2008
Dendritic cell SIRT1–HIF1α axis programs the differentiation of CD4 + T cells through IL-12 and TGF-β1

scientific article published on February 17, 2015
Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores

scientific article published on 03 August 2007
Phenotypic and transcriptional analysis of the osmotic regulator OmpR in Yersinia pestis

scientific article published on February 23, 2011

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