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List of works by Tymon Rubel

An integrated LC-ESI-MS platform for quantitation of serum peptide ladders. Application for colon carcinoma study.

scientific article published on 30 July 2009

Application of Density Based Clustering to Microarray Data Analysis

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis

scientific article

Casein kinases phosphorylate multiple residues spanning the entire hnRNP K length

scientific article published on 06 January 2006

Comparative kinome analysis to identify putative colon tumor biomarkers ⬇️

scientific article published on November 18, 2011

Comprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter

scientific article

Correction: Modeling Oncogenic Signaling in Colon Tumors by Multidirectional Analyses of Microarray Data Directed for Maximization of Analytical Reliability.

scientific article published on 2 December 2010

Diffprot - software for non-parametric statistical analysis of differential proteomics data

scientific article

Functional features of gene expression profiles differentiating gastrointestinal stromal tumours according to KIT mutations and expression

scientific article

Gene expression alterations induced by low molecular weight heparin during bowel anastomosis healing in rats

scientific article published on March 18, 2011

HAX1 impact on collective cell migration, cell adhesion, and cell shape is linked to the regulation of actomyosin contractility

scientific article published on 23 October 2019

Halogenated imidazole derivatives block RNA polymerase II elongation along mitogen inducible genes

scientific article

Histone H1 Variants in Arabidopsis Are Subject to Numerous Post-Translational Modifications, Both Conserved and Previously Unknown in Histones, Suggesting Complex Functions of H1 in Plants

scientific article published on 28 January 2016

Histone H3 lysine 27 acetylation is altered in colon cancer

scientific article published on 3 June 2014

Integrating proteomic and transcriptomic high-throughput surveys for search of new biomarkers of colon tumors.

scientific article published on 9 November 2010

Landscape of the hnRNP K protein-protein interactome

scientific journal article

Limited prolonged effects of rifaximin treatment on irritable bowel syndrome-related differences in the fecal microbiome and metabolome.

scientific article published on 26 July 2016

Mass Spectrometry-Based Comprehensive Analysis of Pancreatic Cyst Fluids

scientific article published on 29 November 2018

Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles

scientific article

Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data directed for maximization of analytical reliability

scientific article

Molecular defense mechanisms of Barrett's metaplasia estimated by an integrative genomics

scientific article published on 30 March 2007

Neural Network-Based Method for Peptide Identification in Proteomics

Pre-analytical-related variability influencing serum peptide profiles demonstrated in a mass spectrometry-based search for colorectal and prostate cancer biomarkers

scientific article published on 18 September 2013

The Novel Gene CRNDE Encodes a Nuclear Peptide (CRNDEP) Which Is Overexpressed in Highly Proliferating Tissues.

scientific article published on 15 May 2015

The interactome of multifunctional HAX1 protein suggests its role in the regulation of energy metabolism, de-aggregation, cytoskeleton organization and RNA-processing

scientific article published on 04 November 2020

The putative oncogene, CRNDE, is a negative prognostic factor in ovarian cancer patients.

scientific article published on 4 November 2015

Three clinical variants of gastroesophageal reflux disease form two distinct gene expression signatures.

scientific article

Urine proteomes of healthy aging humans reveal extracellular matrix (ECM) alterations and immune system dysfunction.

scientific article published on 06 August 2013

Yeast prion [PSI+] lowers the levels of mitochondrial prohibitins

scientific article published on 18 August 2009

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

scientific article

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