List of works - Sonja A Dames

1H, 13C, and 15N chemical shift assignments for the N-terminal extracellular domain of T-cadherin

scientific article published on 19 December 2006

1H, 15N, and 13C assignments of the N-terminal activation domain of Dictyostelium discoideum Formin C

scientific article published on 07 October 2010

1H, 15N, and 13C chemical shift assignments of the micelle immersed FAT C-terminal (FATC) domains of the human protein kinases ataxia-telangiectasia mutated (ATM) and DNA-dependent protein kinase catalytic subunit (DNA-PKcs) fused to the B1 domain o

scientific article

A Rigorous and Efficient Method To Reweight Very Large Conformational Ensembles Using Average Experimental Data and To Determine Their Relative Information Content.

scientific article

A fast and simple method for probing the interaction of peptides and proteins with lipids and membrane-mimetics using GB1 fusion proteins and NMR spectroscopy

scientific article published on October 2012

A fast and simple method to prepare the FKBP-rapamycin binding domain of human target of rapamycin for NMR binding assays

scientific article published on 26 January 2008

A flexible bipartite coiled coil structure is required for the interaction of Hexim1 with the P-TEFB subunit cyclin T1.

scientific article published in April 2010

Characterization of residue-dependent differences in the peripheral membrane association of the FATC domain of the kinase 'target of rapamycin' by NMR and CD spectroscopy

scientific article

Characterization of the immersion properties of the peripheral membrane anchor of the FATC domain of the kinase "target of rapamycin" by NMR, oriented CD spectroscopy, and MD simulations

scientific article published on 25 April 2014

Chemical shift assignment of the intrinsically disordered N-terminus and the rubredoxin domain in the folded metal bound and unfolded oxidized state of mycobacterial protein kinase G.

scientific article published on 8 September 2016

Contributions of the ionization states of acidic residues to the stability of the coiled coil domain of matrilin-1

scientific article published on 01 March 1999

Expression and purification of the natively disordered and redox sensitive metal binding regions of Mycobacterium tuberculosis protein kinase G.

scientific article

Heteronuclear NMR assignments and secondary structure of the coiled coil trimerization domain from cartilage matrix protein in oxidized and reduced forms ⬇️

scientific article published on August 1, 1997

In support of the BMRB.

scientific article published in September 2012

Insights into the low adhesive capacity of human T-cadherin from the NMR structure of Its N-terminal extracellular domain

scientific article

NMR analysis of the backbone dynamics of the small GTPase Rheb and its interaction with the regulatory protein FKBP38.

scientific article published on 30 November 2017

NMR assignment of the Cyclin T-binding domain of human Hexim1

scientific article published on 23 May 2006

NMR structure of a parallel homotrimeric coiled coil

scientific article

NMR- and MD simulation-based structural characterization of the membrane-associating FATC domain of ataxia telangiectasia mutated

scientific article published on 13 March 2019

NMR- and circular dichroism-monitored lipid binding studies suggest a general role for the FATC domain as membrane anchor of phosphatidylinositol 3-kinase-related kinases (PIKK)

scientific article published on 13 May 2013

One short cysteine-rich sequence pattern - two different disulfide-bonded structures - a molecular dynamics simulation study

scientific article published on 17 March 2015

Oxidative Unfolding of the Rubredoxin Domain and the Natively Disordered N-terminal Region Regulate the Catalytic Activity of Mycobacterium tuberculosis Protein Kinase G. ⬇️

scientific article

Positional screening and NMR structure determination of side-chain-to-side-chain cyclized β3-peptides

scientific article

Regulation of the Target of Rapamycin and Other Phosphatidylinositol 3-Kinase-Related Kinases by Membrane Targeting

scientific article

Residual Dipolar Couplings in Short Peptides Reveal Systematic Conformational Preferences of Individual Amino Acids

scientific article published on 01 October 2006

Structural Basis for the Association of the Redox-sensitive Target of Rapamycin FATC Domain with Membrane-mimetic Micelles

scientific article

Structural basis for Hif-1 alpha /CBP recognition in the cellular hypoxic response

scientific article

Structure and dynamics of a stabilized coiled-coil domain in the P-TEFb regulator Hexim1

scientific article

Structure of amyloid A4-(1-40)-peptide of Alzheimer's disease

scientific article

Structure of the Cyclin T binding domain of Hexim1 and molecular basis for its recognition of P-TEFb

scientific article

Structure, Dynamics, Lipid Binding, and Physiological Relevance of the Putative GTPase-binding Domain of Dictyostelium Formin C

scientific article

Subtype-specific modulation of estrogen receptor-coactivator interaction by phosphorylation

scientific article

Target of rapamycin FATC domain as a general membrane anchor: The FKBP-12 like domain of FKBP38 as a case study

scientific article

The FKBP-rapamycin binding domain of human TOR undergoes strong conformational changes in the presence of membrane mimetics with and without the regulator phosphatidic acid

scientific article published on 5 June 2012

The solution structure of the FATC domain of the protein kinase target of rapamycin suggests a role for redox-dependent structural and cellular stability

scientific article

List of works by Sonja A Dames

1H, 13C, and 15N chemical shift assignments for the N-terminal extracellular domain of T-cadherin

1H, 15N, and 13C assignments of the N-terminal activation domain of Dictyostelium discoideum Formin C

1H, 15N, and 13C chemical shift assignments of the micelle immersed FAT C-terminal (FATC) domains of the human protein kinases ataxia-telangiectasia mutated (ATM) and DNA-dependent protein kinase catalytic subunit (DNA-PKcs) fused to the B1 domain o

A Rigorous and Efficient Method To Reweight Very Large Conformational Ensembles Using Average Experimental Data and To Determine Their Relative Information Content.

A fast and simple method for probing the interaction of peptides and proteins with lipids and membrane-mimetics using GB1 fusion proteins and NMR spectroscopy

A fast and simple method to prepare the FKBP-rapamycin binding domain of human target of rapamycin for NMR binding assays

A flexible bipartite coiled coil structure is required for the interaction of Hexim1 with the P-TEFB subunit cyclin T1.

Characterization of residue-dependent differences in the peripheral membrane association of the FATC domain of the kinase 'target of rapamycin' by NMR and CD spectroscopy

Characterization of the immersion properties of the peripheral membrane anchor of the FATC domain of the kinase "target of rapamycin" by NMR, oriented CD spectroscopy, and MD simulations

Chemical shift assignment of the intrinsically disordered N-terminus and the rubredoxin domain in the folded metal bound and unfolded oxidized state of mycobacterial protein kinase G.

Contributions of the ionization states of acidic residues to the stability of the coiled coil domain of matrilin-1

Expression and purification of the natively disordered and redox sensitive metal binding regions of Mycobacterium tuberculosis protein kinase G.

Heteronuclear NMR assignments and secondary structure of the coiled coil trimerization domain from cartilage matrix protein in oxidized and reduced forms ⬇️

In support of the BMRB.

Insights into the low adhesive capacity of human T-cadherin from the NMR structure of Its N-terminal extracellular domain

NMR analysis of the backbone dynamics of the small GTPase Rheb and its interaction with the regulatory protein FKBP38.

NMR assignment of the Cyclin T-binding domain of human Hexim1

NMR structure of a parallel homotrimeric coiled coil

NMR- and MD simulation-based structural characterization of the membrane-associating FATC domain of ataxia telangiectasia mutated

NMR- and circular dichroism-monitored lipid binding studies suggest a general role for the FATC domain as membrane anchor of phosphatidylinositol 3-kinase-related kinases (PIKK)

One short cysteine-rich sequence pattern - two different disulfide-bonded structures - a molecular dynamics simulation study

Oxidative Unfolding of the Rubredoxin Domain and the Natively Disordered N-terminal Region Regulate the Catalytic Activity of Mycobacterium tuberculosis Protein Kinase G. ⬇️

Positional screening and NMR structure determination of side-chain-to-side-chain cyclized β3-peptides

Regulation of the Target of Rapamycin and Other Phosphatidylinositol 3-Kinase-Related Kinases by Membrane Targeting

Residual Dipolar Couplings in Short Peptides Reveal Systematic Conformational Preferences of Individual Amino Acids

Structural Basis for the Association of the Redox-sensitive Target of Rapamycin FATC Domain with Membrane-mimetic Micelles

Structural basis for Hif-1 alpha /CBP recognition in the cellular hypoxic response

Structure and dynamics of a stabilized coiled-coil domain in the P-TEFb regulator Hexim1

Structure of amyloid A4-(1-40)-peptide of Alzheimer's disease

Structure of the Cyclin T binding domain of Hexim1 and molecular basis for its recognition of P-TEFb

Structure, Dynamics, Lipid Binding, and Physiological Relevance of the Putative GTPase-binding Domain of Dictyostelium Formin C

Subtype-specific modulation of estrogen receptor-coactivator interaction by phosphorylation

Target of rapamycin FATC domain as a general membrane anchor: The FKBP-12 like domain of FKBP38 as a case study

The FKBP-rapamycin binding domain of human TOR undergoes strong conformational changes in the presence of membrane mimetics with and without the regulator phosphatidic acid

The solution structure of the FATC domain of the protein kinase target of rapamycin suggests a role for redox-dependent structural and cellular stability