List of works - Laura Eme

A Eukaryote without a Mitochondrial Organelle.

scientific article

A SUF Fe-S cluster biogenesis system in the mitochondrion-related organelles of the anaerobic protist Pygsuia

scientific article published on 22 May 2014

A complex cell division machinery was present in the last common ancestor of eukaryotes

scientific article

A eukaryotic-like sulfiredoxin involved in oxidative stress responses and in the reduction of the sulfinic form of 2-Cys peroxiredoxin in the cyanobacterium Anabaena PCC 7120.

scientific article

A natural toroidal microswimmer with a rotary eukaryotic flagellum

scientific article published on 10 June 2019

An ancestral bacterial division system is widespread in eukaryotic mitochondria.

scientific article

Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes

scientific article published in December 2021

Archaea

scientific article published in October 2015

Archaea and the origin of eukaryotes

scientific article published on 27 November 2017

Archaea and the origin of eukaryotes

scientific article published in November 2017

Asgard archaea are the closest prokaryotic relatives of eukaryotes.

scientific article published on 29 March 2018

Asgard archaea capable of anaerobic hydrocarbon cycling

scientific article published on 23 April 2019

Chlamydial contribution to anaerobic metabolism during eukaryotic evolution

scientific article published on 26 August 2020

Corrigendum Correction to "Novel hydrogenosomes in the microaerophilic jakobid Stygiella incarcerata".

scientific article published on 2 February 2017

Demystifying Eukaryote Lateral Gene Transfer (Response to Martin 2017 DOI: 10.1002/bies.201700115)

article

Evolution of the cytosolic iron-sulfur cluster assembly machinery in Blastocystis species and other microbial eukaryotes

scientific article published on 15 November 2013

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.

scientific article published on 11 September 2017

Gene Acquisitions from Bacteria at the Origins of Major Archaeal Clades Are Vastly Overestimated

scientific article published on 4 November 2015

Gene fusion, fission, lateral transfer, and loss: Not-so-rare events in the evolution of eukaryotic ATP citrate lyase

article

Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria

scientific article published on 7 December 2023

Heme pathway evolution in kinetoplastid protists

scientific article (publication date: 18 May 2016)

Hemimastigophora is a novel supra-kingdom-level lineage of eukaryotes

scientific article published in Nature

Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes

scientific article published on 01 April 2022

Lateral Gene Transfer Mechanisms and Pan-genomes in Eukaryotes

scientific article published on 19 August 2020

Lateral Gene Transfer in the Adaptation of the Anaerobic Parasite Blastocystis to the Gut.

scientific article

Life through the lens of metabolism

scientific article published in 2022

Marine Sediments Illuminate Chlamydiae Diversity and Evolution

scientific article published on 05 March 2020

Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper)thermophilic lineages related to Thaumarchaeota

scientific article

Microbial Evolution: Xenology (Apparently) Trumps Paralogy.

scientific article

Microbial diversity: a bonanza of phyla

scientific article published on March 2015

Microbial eukaryotes have adapted to hypoxia by horizontal acquisitions of a gene involved in rhodoquinone biosynthesis.

scientific article published on 26 April 2018

Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida

scientific article published on 22 August 2023

Molecular characterization of the conoid complex in Toxoplasma reveals its conservation in all apicomplexans, including Plasmodium species.

scientific article

Nephromyces Represents a Diverse and Novel Lineage of the Apicomplexa That Has Retained Apicoplasts

scientific article published on 01 October 2019

Novel Hydrogenosomes in the Microaerophilic Jakobid Stygiella incarcerata

scientific article published on 08 June 2016

Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids

scientific article published on 28 November 2018

On the age of eukaryotes: evaluating evidence from fossils and molecular clocks

scientific article

Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes.

scientific article

Origins of major archaeal clades do not correspond to gene acquisitions from bacteria

article

PhyloFisher: A phylogenomic package for resolving eukaryotic relationships ⬇️

scientific article published on 06 August 2021

PhyloMagnet: fast and accurate screening of short-read meta-omics data using gene-centric phylogenetics

scientific article published on 01 March 2020

Phylogenomics Reveals Convergent Evolution of Lifestyles in Close Relatives of Animals and Fungi

scientific article

Proposal of the reverse flow model for the origin of the eukaryotic cell based on comparative analyses of Asgard archaeal metabolism

scientific article published on 01 April 2019

Releasing uncurated datasets is essential for reproducible phylogenomics

scientific article published on 03 September 2020

Symbiosis in eukaryotic evolution.

scientific article published on 27 February 2017

Symbiosis in the microbial world: from ecology to genome evolution

scientific article published on 22 February 2018

The Oxymonad Genome Displays Canonical Eukaryotic Complexity in the Absence of a Mitochondrion

scientific article published on 01 October 2019

The changing view of eukaryogenesis - fossils, cells, lineages and how they all come together

scientific article

The eukaryotic ancestor shapes up

scientific article published in Nature

The phylogenomic analysis of the anaphase promoting complex and its targets points to complex and modern-like control of the cell cycle in the last common ancestor of eukaryotes

scientific article

Timing the Origins of Multicellular Eukaryotes Through Phylogenomics and Relaxed Molecular Clock Analyses

TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets

scientific article published on 15 February 2022

List of works by Laura Eme

A Eukaryote without a Mitochondrial Organelle.

A SUF Fe-S cluster biogenesis system in the mitochondrion-related organelles of the anaerobic protist Pygsuia

A complex cell division machinery was present in the last common ancestor of eukaryotes

A eukaryotic-like sulfiredoxin involved in oxidative stress responses and in the reduction of the sulfinic form of 2-Cys peroxiredoxin in the cyanobacterium Anabaena PCC 7120.

A natural toroidal microswimmer with a rotary eukaryotic flagellum

An ancestral bacterial division system is widespread in eukaryotic mitochondria.

Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes

Archaea

Archaea and the origin of eukaryotes

Archaea and the origin of eukaryotes

Asgard archaea are the closest prokaryotic relatives of eukaryotes.

Asgard archaea capable of anaerobic hydrocarbon cycling

Chlamydial contribution to anaerobic metabolism during eukaryotic evolution

Corrigendum Correction to "Novel hydrogenosomes in the microaerophilic jakobid Stygiella incarcerata".

Demystifying Eukaryote Lateral Gene Transfer (Response to Martin 2017 DOI: 10.1002/bies.201700115)

Evolution of the cytosolic iron-sulfur cluster assembly machinery in Blastocystis species and other microbial eukaryotes

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.

Gene Acquisitions from Bacteria at the Origins of Major Archaeal Clades Are Vastly Overestimated

Gene fusion, fission, lateral transfer, and loss: Not-so-rare events in the evolution of eukaryotic ATP citrate lyase

Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria

Heme pathway evolution in kinetoplastid protists

Hemimastigophora is a novel supra-kingdom-level lineage of eukaryotes

Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes

Lateral Gene Transfer Mechanisms and Pan-genomes in Eukaryotes

Lateral Gene Transfer in the Adaptation of the Anaerobic Parasite Blastocystis to the Gut.

Life through the lens of metabolism

Marine Sediments Illuminate Chlamydiae Diversity and Evolution

Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper)thermophilic lineages related to Thaumarchaeota

Microbial Evolution: Xenology (Apparently) Trumps Paralogy.

Microbial diversity: a bonanza of phyla

Microbial eukaryotes have adapted to hypoxia by horizontal acquisitions of a gene involved in rhodoquinone biosynthesis.

Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida

Molecular characterization of the conoid complex in Toxoplasma reveals its conservation in all apicomplexans, including Plasmodium species.

Nephromyces Represents a Diverse and Novel Lineage of the Apicomplexa That Has Retained Apicoplasts

Novel Hydrogenosomes in the Microaerophilic Jakobid Stygiella incarcerata

Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids

On the age of eukaryotes: evaluating evidence from fossils and molecular clocks

Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes.

Origins of major archaeal clades do not correspond to gene acquisitions from bacteria

PhyloFisher: A phylogenomic package for resolving eukaryotic relationships ⬇️

PhyloMagnet: fast and accurate screening of short-read meta-omics data using gene-centric phylogenetics

Phylogenomics Reveals Convergent Evolution of Lifestyles in Close Relatives of Animals and Fungi

Proposal of the reverse flow model for the origin of the eukaryotic cell based on comparative analyses of Asgard archaeal metabolism

Releasing uncurated datasets is essential for reproducible phylogenomics

Symbiosis in eukaryotic evolution.

Symbiosis in the microbial world: from ecology to genome evolution

The Oxymonad Genome Displays Canonical Eukaryotic Complexity in the Absence of a Mitochondrion

The changing view of eukaryogenesis - fossils, cells, lineages and how they all come together

The eukaryotic ancestor shapes up

The phylogenomic analysis of the anaphase promoting complex and its targets points to complex and modern-like control of the cell cycle in the last common ancestor of eukaryotes

Timing the Origins of Multicellular Eukaryotes Through Phylogenomics and Relaxed Molecular Clock Analyses

TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets