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List of works by Gur Yaari

"Hot hand" on strike: bowling data indicates correlation to recent past results, not causality

scientific article

Abstract 5564: The interplay between etiology-dependent genomic and epigenetic signatures: The paradigm of liver cancer

Analysis of celiac disease autoreactive gut plasma cells and their corresponding memory compartment in peripheral blood using high-throughput sequencing

scientific article published on 13 May 2015

Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles

scientific article

B cells populating the multiple sclerosis brain mature in the draining cervical lymph nodes

scientific article

BCR affinity differentially regulates colonization of the subepithelial dome and infiltration into germinal centers within Peyer's patches

scientific article published on 04 March 2019

Branching morphology determines signal propagation dynamics in neurons

scientific article published on 21 August 2017

Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data

scientific article

Consistent scaling of persistence time in metapopulations

scientific article published in May 2012

Correction: The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies.

scientific article published on 30 December 2013

Detecting selection in immunoglobulin sequences

scientific article

Effects of correlations and fees in random multiplicative environments: Implications for portfolio management

scientific article published on 7 August 2017

Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE)

article

Germinal center B cell and T follicular helper cell development initiates in the interfollicular zone

scientific article published on June 2011

Hepatitis C virus leaves an epigenetic signature post cure of infection by direct-acting antivirals

scientific article published on 19 June 2019

High-resolution antibody dynamics of vaccine-induced immune responses

scientific article (publication date: April 2014)

Identification of Subject-Specific Immunoglobulin Alleles From Expressed Repertoire Sequencing Data

scientific article published on 13 February 2019

In-medium isovector piN amplitude from low-energy pion scattering

scientific article published on 16 September 2004

Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming

article

Intermittency and Localization

Local enrichment and its nonlocal consequences for victim–exploiter metapopulations

scholarly article by Gur Yaari et al published October 2008 in Physica D

Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data

scientific article

Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping

scientific article published in Nature Communications

Multi-Clonal Live SARS-CoV-2 In Vitro Neutralization by Antibodies Isolated from Severe COVID-19 Convalescent Donors

scientific article published on 06 October 2020

Multi-clonal SARS-CoV-2 neutralization by antibodies isolated from severe COVID-19 convalescent donors

scientific article published on 11 February 2021

Multiple transcription factor binding sites predict AID targeting in non-Ig genes

scientific article published on 20 March 2013

OGRDB: a reference database of inferred immune receptor genes

scientific article published on 01 January 2020

Ontogeny of the B Cell Receptor Repertoire and Microbiome in Mice

scientific article published in 2022

Optimizing metapopulation sustainability through a checkerboard strategy

scientific article

Practical guidelines for B-cell receptor repertoire sequencing analysis

scientific article

Protein array-based profiling of CSF identifies RBPJ as an autoantigen in multiple sclerosis

scientific article published on 06 August 2013

Quantification of read species behavior within whole genome sequencing of cancer genomes for the stratification and visualization of genomic variation

scientific article published on 24 January 2016

Quantifying selection in high-throughput Immunoglobulin sequencing data sets

scientific article

Quantitative set analysis for gene expression: a method to quantify gene set differential expression including gene-gene correlations

scientific article published on 5 August 2013

Responsive population dynamics and wide seeding into the duodenal lamina propria of transglutaminase-2-specific plasma cells in celiac disease

scientific article published on 8 July 2015

Slicing and Dicing the Genome: A Statistical Physics Approach to Population Genetics

article

Species survival emerge from rare events of individual migration

scientific article

System-wide Analysis of the T Cell Response

scientific article published on 8 March 2016

T cell receptor beta germline variability is revealed by inference from repertoire data

scientific article published on 07 January 2022

The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies

scientific article

The Hot (Invisible?) Hand: Can Time Sequence Patterns of Success/Failure in Sports Be Modeled as Repeated Random Independent Trials? ⬇️

scientific article published on October 5, 2011

The Universal Shape of Economic Recession and Recovery after a Shock

The immune cell infiltrate populating meningiomas is composed of mature, antigen-experienced T and B cells

scientific article published on 26 August 2013

The mutation patterns in B-cell immunoglobulin receptors reflect the influence of selection acting at multiple time-scales

scientific article published on September 2015

VDJbase: an adaptive immune receptor genotype and haplotype database

scientific article published on 01 January 2020

pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires

scientific article

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