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List of works by Jie Zheng

Benchmarking human protein complexes to investigate drug-related systems and evaluate predicted protein complexes

scientific article

Detecting sequence polymorphisms associated with meiotic recombination hotspots in the human genome

scientific article published on 20 October 2010

Drug-target interaction prediction by learning from local information and neighbors

scientific article published on 17 November 2012

Dynamical analysis of cellular ageing by modeling of gene regulatory network based attractor landscape.

scientific article published in June 2018

Efficient selection of unique and popular oligos for large EST databases.

scientific article published in April 2004

Epigenetic functions enriched in transcription factors binding to mouse recombination hotspots

scientific article

OligoSpawn: a software tool for the design of overgo probes from large unigene datasets.

scientific article

PIKE-R2P: Protein–protein interaction network-based knowledge embedding with graph neural network for single-cell RNA to protein prediction

scientific article published on 02 June 2021

PiLSL: pairwise interaction learning-based graph neural network for synthetic lethality prediction in human cancers

scientific article published in 2022

SimBoolNet--a Cytoscape plugin for dynamic simulation of signaling networks

scientific article

Support for the Coelomata clade of animals from a rigorous analysis of the pattern of intron conservation

scientific article

Syn-lethality: an integrative knowledge base of synthetic lethality towards discovery of selective anticancer therapies

scientific article published on 22 April 2014

Teasing apart translational and transcriptional components of stochastic variations in eukaryotic gene expression

scientific article

The crosstalk between EGF, IGF, and Insulin cell signaling pathways--computational and experimental analysis

scientific article published on 04 September 2009

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