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List of works by Michael J. Sadowsky

7-Methylation of Chenodeoxycholic Acid Derivatives Yields a Substantial Increase in TGR5 Receptor Potency

scientific article published on 03 July 2019

A Community Multi-Omics Approach towards the Assessment of Surface Water Quality in an Urban River System.

scientific article published on 14 March 2017

A High-Throughput DNA-Sequencing Approach for Determining Sources of Fecal Bacteria in a Lake Superior Estuary.

scientific article

A New Family of Biuret Hydrolases Involved in S-Triazine Ring Metabolism.

scientific article

A manganese-dependent dioxygenase from Arthrobacter globiformis CM-2 belongs to the major extradiol dioxygenase family

scientific article published on March 1995

A marker-dense physical map of the Bradyrhizobium japonicum genome

scientific article

A microfluidic platform for the simultaneous quantification of methanogen populations in anaerobic digestion processes

scientific article published on 29 March 2019

A multi-omics based ecological analysis of coastal marine sediments from Gladstone, in Australia's Central Queensland, and Heron Island, a nearby fringing platform reef

scientific article published on 30 July 2017

A novel microbial source tracking microarray for pathogen detection and fecal source identification in environmental systems.

scientific article published on 27 May 2015

A pilot study of fecal bile acid and microbiota profiles in inflammatory bowel disease and primary sclerosing cholangitis

scientific article published on 10 January 2019

Absence of Escherichia coli phylogenetic group B2 strains in humans and domesticated animals from Jeonnam Province, Republic of Korea.

scientific article published on 10 July 2009

Aerobic digestion reduces the quantity of antibiotic resistance genes in residual municipal wastewater solids.

scientific article published on 12 February 2013

Agricultural microbes genome 2.

scientific article published on January 2001

Air-drying beds reduce the quantities of antibiotic resistance genes and class 1 integrons in residual municipal wastewater solids

scientific article published on 16 August 2013

Allophanate hydrolase, not urease, functions in bacterial cyanuric acid metabolism

scientific article published on August 2005

Amino acid substitutions in naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4 result in regio- and stereo-specific hydroxylation of flavanone and isoflavanone

scientific article published on 6 March 2012

Amplicon-based profiling of bacteria in raw and secondary treated wastewater from treatment plants across Australia.

scientific article

Amplicon-based taxonomic characterization of bacteria in urban and peri-urban roof-harvested rainwater stored in tanks

scientific article

An Alkane Sulfonate Monooxygenase Is Required for Symbiotic Nitrogen Fixation by Bradyrhizobium diazoefficiens (syn. Bradyrhizobium japonicum) USDA110T

scientific article published on 27 November 2019

An Oligonucleotide Microarray Resource for Transcriptional Profiling of Bradyrhizobium japonicum

article

Analysis of gut microbiota - An ever changing landscape

scientific article

Antimicrobial peptides targeting Gram-negative pathogens, produced and delivered by lactic acid bacteria.

scientific article

Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River.

scientific article

Application of SourceTracker for Accurate Identification of Fecal Pollution in Recreational Freshwater: A Double-Blinded Study

scientific article published on 13 March 2018

Applications of the rep-PCR DNA fingerprinting technique to study microbial diversity, ecology and evolution

scientific article

Arsenic availability from chromated copper arsenate (CCA)-treated wood

scientific article

Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC are linked on a 160-kilobase region and are functional in Escherichia coli

scientific article

Arthrobacter aurescens TC1 metabolizes diverse s-triazine ring compounds

scientific article

Assessment of statistical methods used in library-based approaches to microbial source tracking

scientific article published in December 2003

Association between submerged aquatic vegetation and elevated levels of Escherichia coli and potential bacterial pathogens in freshwater lakes

scientific article published on 02 December 2018

Association of toxin-producing Clostridium botulinum with the macroalga Cladophora in the Great Lakes

scientific article published on 4 March 2013

Associations between soil bacterial community structure and nutrient cycling functions in long-term organic farm soils following cover crop and organic fertilizer amendment

scientific article published on 8 June 2016

Atrazine chlorohydrolase from Pseudomonas sp. strain ADP is a metalloenzyme

scientific article published in December 2002

Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization

scientific article

Availability of triazine herbicides in aged soils amended with olive oil mill waste

scientific article published on 20 May 2008

Bacillus megaterium strains derived from water and soil exhibit differential responses to the herbicide mesotrione.

scientific article

Bacterial ammeline metabolism via guanine deaminase

scientific article published on 18 December 2009

Bacterial biogeography influenced by shelf-basin exchange in the Arctic surface sediment at the Chukchi Borderland.

scientific article published on 28 September 2015

Bacterial community structure is indicative of chemical inputs in the Upper Mississippi River

scientific article

Bacterial formation of extracellular U(vi) nanowires

scientific article published on 17 June 2011

Beach sand and sediments are temporal sinks and sources of Escherichia coli in Lake Superior

scientific article

Beach sand and the potential for infectious disease transmission: observations and recommendations

article

Bioavailability of organoclay formulations of atrazine in soil.

scientific article published on 22 October 2010

Biodegradation and mineralization of metolachlor and alachlor by Candida xestobii

scientific article published on 29 December 2010

Biodegradation of atrazine by three transgenic grasses and alfalfa expressing a modified bacterial atrazine chlorohydrolase gene

scientific article published on 29 November 2014

Biodegradation of atrazine in transgenic plants expressing a modified bacterial atrazine chlorohydrolase (atzA) gene

article

Biogenic formation of As-S nanotubes by diverse Shewanella strains.

scientific article published on 28 August 2009

Biogenic formation of photoactive arsenic-sulfide nanotubes by Shewanella sp. strain HN-41.

scientific article

Bioturbation by the marine polychaete Capitella teleta alters the sediment microbial community by ingestion and defecation of sediment particles

scientific article published on 07 September 2020

Breastmilk and NICU surfaces are potential sources of fungi for infant mycobiomes

scientific article published on 21 March 2019

CLOUD: a non-parametric detection test for microbiome outliers

scientific article published on 06 August 2018

Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula.

scientific article

Changes in Colonic Bile Acid Composition following Fecal Microbiota Transplantation Are Sufficient to Control Clostridium difficile Germination and Growth ⬇️

scientific article published on 20 January 2016

Changes in human gut microbiota influenced by probiotic fermented milk ingestion.

scientific article published on 8 April 2015

Changes in microbial ecology after fecal microbiota transplantation for recurrent C. difficile infection affected by underlying inflammatory bowel disease

scientific article

Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea

scientific article

Characterization of a Functional Role of the Bradyrhizobium japonicum Isocitrate Lyase in Desiccation Tolerance

scientific article published on 22 July 2015

Characterization of a self-sufficient trans-anethole oxygenase from Pseudomonas putida JYR-1

scientific article

Characterization of an isoeugenol monooxygenase (Iem) from Pseudomonas nitroreducens Jin1 that transforms isoeugenol to vanillin

scientific article published on 7 February 2013

Characterization of cytochromes c550 and c555 from Bradyrhizobium japonicum: cloning, mutagenesis, and sequencing of the c555 gene (cycC).

scientific article published in December 1991

Cladophora (Chlorophyta) spp. harbor human bacterial pathogens in nearshore water of Lake Michigan

scientific article

Climate Change Impacts on Microbiota in Beach Sand and Water: Looking Ahead

scientific article published in 2022

Cloning, characterization, and expression of a gene region from Pseudomonas sp. strain ADP involved in the dechlorination of atrazine

scientific article

Community dynamics drive punctuated engraftment of the fecal microbiome following transplantation using freeze-dried, encapsulated fecal microbiota.

scientific article

Comparative decay of sewage-associated marker genes in beach water and sediment in a subtropical region

article

Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies

scientific article

Comparisons of bacterial and archaeal communities in the rumen and a dual-flow continuous culture fermentation system using amplicon sequencing

article

Competition between two wood-degrading fungi with distinct influences on residues

scientific article

Complementary amplicon-based genomic approaches for the study of fungal communities in humans

scientific article

Complete Genome Sequence of Sinorhizobium meliloti Bacteriophage HMSP1-Susan.

scientific article

Complete Genome Sequence of the Sesbania Symbiont and Rice Growth-Promoting Endophyte Rhizobium sp. Strain IRBG74.

scientific article

Complete Genome Sequence of the Triclosan- and Multidrug-Resistant Pseudomonas aeruginosa Strain B10W Isolated from Municipal Wastewater

scientific article published on 19 January 2017

Complete Microbiota Engraftment Is Not Essential for Recovery from Recurrent Clostridium difficile Infection following Fecal Microbiota Transplantation

scientific article published on 20 December 2016

Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP

scientific article

Composition and Potential Functions of Rhizobacterial Communities in a Pioneer Plant from Andean Altiplano

scientific article published in 2021

Compositional and temporal stability of fecal taxon libraries for use with SourceTracker in sub-tropical catchments

scientific article published on 13 August 2019

Comprehensive Functional Analysis of the Enterococcus faecalis Core Genome Using an Ordered, Sequence-Defined Collection of Insertional Mutations in Strain OG1RF

scientific article published on 11 September 2018

Contemporary Applications of Fecal Microbiota Transplantation to Treat Intestinal Diseases in Humans

scientific article published on 25 November 2017

Convenient Protocol for Production and Purification of Clostridioides difficile Spores for Germination Studies

scientific article published on 24 July 2020

Core functional traits of bacterial communities in the Upper Mississippi River show limited variation in response to land cover

scientific article

Correlations between pathogen concentration and fecal indicator marker genes in beach environments.

scientific article

Corrigendum to "Comparative decay of sewage-associated marker genes in beach water and sediment in a subtropical region"[Water Res 149 (2019) 511-521]

scientific article published on 01 August 2019

Corrigendum to “Precipitation influences pathogenic bacteria and antibiotic resistance genes abundance in storm drain outfalls in coastal sub-tropical waters” [Environ. Int. 116 (2018) 308–318]

article

Corrigendum: Ammonium sorption and ammonia inhibition of nitrite-oxidizing bacteria explain contrasting soil N₂O production.

scientific article published on 8 February 2016

Cultivar and phosphorus effects on switchgrass yield and rhizosphere microbial diversity

scientific article published on 07 December 2018

Current understanding of microbiota- and dietary-therapies for treating inflammatory bowel disease.

scientific article

Decay of genetic markers for fecal bacterial indicators and pathogens in sand from Lake Superior

scientific article published on 16 April 2014

Decay of sewage-associated bacterial communities in fresh and marine environmental waters and sediment

scientific article published on 05 June 2018

Defining Sequence Space and Reaction Products within the Cyanuric Acid Hydrolase (AtzD)/Barbiturase Protein Family ⬇️

scientific article published on June 22, 2012

Denitrifying Bacteria Active in Woodchip Bioreactors at Low-Temperature Conditions

scientific article published on 02 April 2019

Detection of homoserine lactone-like quorum sensing molecules in bradyrhizobium strains.

scientific article published on 25 August 2005

Determining sources of fecal bacteria in waterways

scientific article published on 28 October 2006

Development of fecal microbiota transplantation suitable for mainstream medicine

scientific article

Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways

scientific article published in June 2006

Dietary Factors in Sulfur Metabolism and Pathogenesis of Ulcerative Colitis

scientific article published on 25 April 2019

Differential Impacts of Land-Based Sources of Pollution on the Microbiota of Southeast Florida Coral Reefs

scientific article

Distribution of genetic markers of fecal pollution on a freshwater sandy shoreline in proximity to wastewater effluent

scientific article published on 21 March 2013

Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism

scientific article

Draft Genome Sequence of Sphingobacterium sp. Strain PM2-P1-29, a Tetracycline-Degrading TetX-Expressing Aerobic Bacterium Isolated from Agricultural Soil

scientific article

Draft Genome Sequences of Four Novel Thermal- and Alkaline-Tolerant Egyptian Rhizobium Strains Nodulating Berseem Clover

scientific article

Durable Long-Term Bacterial Engraftment following Encapsulated Fecal Microbiota Transplantation To Treat Clostridium difficile Infection

scientific article published on 23 July 2019

Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difficile infection

scientific article published on 30 March 2015

Dynamic changes in the population structure of Escherichia coli in the Yeongsan River basin of South Korea.

scientific article published on 20 October 2015

E. coli histidine triad nucleotide binding protein 1 (ecHinT) is a catalytic regulator of D-alanine dehydrogenase (DadA) activity in vivo

scientific article

Editorial: Alternative Therapeutic Approaches For Multidrug Resistant Clostridium difficile.

scientific article

Effect of Different Treatment Technologies on the Fate of Antibiotic Resistance Genes and Class 1 Integrons when Residual Municipal Wastewater Solids are Applied to Soil

scientific article published on 17 November 2017

Effect of Fecal Microbiota Transplantation on Recurrence in Multiply Recurrent Clostridium difficile Infection: A Randomized Trial

scientific article

Effects of incorporated corn residues on glyphosate mineralization and sorption in soil

scientific article published in May 2005

Endophytic Bacterial Communities Associated with Roots and Leaves of Plants Growing in Chilean Extreme Environments

article

Enhanced Nodulation and Nodule Development bynolRMutants ofSinorhizobium medicaeon SpecificMedicagoHost Genotypes

article

Enteric pathogen-plant interactions: molecular connections leading to colonization and growth and implications for food safety

scientific article published on 23 May 2014

Environment shapes the fecal microbiome of invasive carp species ⬇️

scientific article published on 12 August 2016

Environmental Escherichia coli: ecology and public health implications-a review.

scientific article published on 6 April 2017

Environmental and animal-associated enterococci.

scientific article published on January 2014

Environmental fate of two sulfonamide antimicrobial agents in soil

article

Enzymatic degradation of chlorodiamino-s-triazine.

scientific article

Escherichia coli in the Environment: Implications for Water Quality and Human Health

scientific article

Escherichia coli populations in Great Lakes waterfowl exhibit spatial stability and temporal shifting

scientific article

Evaluation of molecular community analysis methods for discerning fecal sources and human waste

scientific article published on 5 July 2013

Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods

scientific article

Evaluation of water sampling methodologies for amplicon-based characterization of bacterial community structure

scientific article published on 6 May 2015

Evolution of catabolic pathways: Genomic insights into microbial s-triazine metabolism

scientific article

Expression and Functional Roles of Bradyrhizobium japonicum Genes Involved in the Utilization of Inorganic and Organic Sulfur Compounds in Free-Living and Symbiotic Conditions

article

Factors controlling long-term survival and growth of naturalized Escherichia coli populations in temperate field soils.

scientific article published on January 2010

Factors influencing the Salmonella internalization into seedpods and whole plants of Arachis hypogaea (L.).

scientific article published on 10 May 2017

Fate of antibiotic resistance genes and class 1 integrons in soil microcosms following the application of treated residual municipal wastewater solids

scientific article published on 5 May 2014

Fecal microbiota transplantation reverses antibiotic and chemotherapy-induced gut dysbiosis in mice.

scientific article published on 18 April 2018

Fecal pollution: new trends and challenges in microbial source tracking using next-generation sequencing

scientific article published on 05 August 2018

Field-scale remediation of atrazine-contaminated soil using recombinant Escherichia coli expressing atrazine chlorohydrolase

scientific article published on 01 February 2000

Frequencies of heavy metal resistance are associated with land cover type in the Upper Mississippi River

scientific article published on 6 January 2015

Frequency and distribution of tetracycline resistance genes in genetically diverse, nonselected, and nonclinical Escherichia coli strains isolated from diverse human and animal sources.

scientific article published on April 2004

Functional role of Bradyrhizobium japonicum trehalose biosynthesis and metabolism genes during physiological stress and nodulation

scientific article

GST activity and membrane lipid saturation prevents mesotrione-induced cellular damage in Pantoea ananatis

scientific article published on 13 September 2016

Gene expression profiling of Escherichia coli in response to interactions with the lettuce rhizosphere

scientific article

Genes and Gut Bacteria Involved in Luminal Butyrate Reduction Caused by Diet and Loperamide.

scientific article published on 28 November 2017

Genetics of competition for nodulation of legumes

scientific article published on January 1992

Genome-Wide Association Analyses in the Model Rhizobium Ensifer meliloti.

scientific article published on 24 October 2018

Genome-scale metabolic network validation of Shewanella oneidensis using transposon insertion frequency analysis

scientific article

Genomes of the symbiotic nitrogen-fixing bacteria of legumes.

scientific article published on June 2007

Genotypic and phenotypic trends in antibiotic resistant pathogenic Escherichia coli isolated from humans and farm animals in South Korea

scientific article published on 11 May 2011

Geographic isolation of Escherichia coli genotypes in sediments and water of the Seven Mile Creek - A constructed riverine watershed.

scientific article published on 19 August 2015

Growth and survival of Escherichia coli and enterococci populations in the macro-alga Cladophora (Chlorophyta)

scientific article published on 01 November 2003

Gut Microbiota Associated With Different Sea Lamprey (<i>Petromyzon marinus</i>) Life Stages

scientific article published on 03 September 2021

Gut-sparing treatment of urinary tract infection in patients at high risk of Clostridium difficile infection

scientific article published on 20 December 2016

Herbicide bioremediation: from strains to bacterial communities

scientific article published on 24 December 2020

High diversity and abundance of antibiotic-resistant Escherichia coli isolated from humans and farm animal hosts in Jeonnam Province, South Korea

scientific article

High-throughput DNA sequence analysis reveals stable engraftment of gut microbiota following transplantation of previously frozen fecal bacteria

scientific article

High-throughput and quantitative procedure for determining sources of Escherichia coli in waterways by using host-specific DNA marker genes

scientific article published on 8 December 2006

High-throughput functional screening reveals low frequency of antibiotic resistance genes in DNA recovered from the Upper Mississippi River

scientific article published on September 2015

Hydroxyatrazine N-ethylaminohydrolase (AtzB): an amidohydrolase superfamily enzyme catalyzing deamination and dechlorination

scientific article published on 27 July 2007

Identification of a Brevibacterium marker gene specific to poultry litter and development of a quantitative PCR assay

scientific article published on 19 January 2010

Immune mediated shaping of microflora community composition depends on barrier site

scientific article published on 08 January 2014

Impacts of Sampling Design on Estimates of Microbial Community Diversity and Composition in Agricultural Soils

scientific article published on 09 March 2019

Impacts of a changing earth on microbial dynamics and human health risks in the continuum between beach water and sand

scientific article published on 03 July 2019

Incidence of naturally internalized bacteria in lettuce leaves

scientific article published on 13 February 2013

Increased Denitrification Rates Associated with Shifts in Prokaryotic Community Composition Caused by Varying Hydrologic Connectivity.

scientific article published on 22 November 2017

Inflammatory Bowel Disease Affects the Outcome of Fecal Microbiota Transplantation for Recurrent Clostridium difficile Infection

scientific article

Influence of Cry1Ac toxin on mineralization and bioavailability of glyphosate in soil

scientific article published in January 2006

Influence of Environmental Stressors on the Microbiota of Zebra Mussels (Dreissena polymorpha)

scientific article published on 26 November 2020

Influence of Hyphal Inoculum potential on the Competitive Success of Fungi Colonizing Wood

scientific article published on 8 March 2015

Influence of Library Composition on SourceTracker Predictions for Community-Based Microbial Source Tracking

scientific article published on 06 December 2018

Influence of Physicochemical Factors on Bacterial Communities Along the Lower Mekong River Assessed by Illumina Next-Generation Sequencing

Influence of earthworm activity on gene transfer from Pseudomonas fluorescens to indigenous soil bacteria

scientific article

Influence of elevated atmospheric carbon dioxide on transcriptional responses of Bradyrhizobium japonicum in the soybean rhizoplane

scientific article (publication date: 2013)

Influence of seasonality on the aerosol microbiome of the Amazon rainforest

scientific article published on 14 December 2020

Influence of seawater intrusion on microbial communities in groundwater.

scientific article published on 13 June 2015

Influence of short-term changes in dietary sulfur on the relative abundances of intestinal sulfate-reducing bacteria

scientific article published on 27 February 2019

Influence of soil aging on sorption and bioavailability of simazine.

scientific article published in February 2006

Insights learned from pBTAi1, a 229-kb accessory plasmid from Bradyrhizobium sp. strain BTAi1 and prevalence of accessory plasmids in other Bradyrhizobium sp. strains

scientific article published on 24 January 2008

Integrated online system for a pyrosequencing-based microbial source tracking method that targets Bacteroidetes 16S rDNA.

scientific article published on 2 August 2011

Interaction of gut microbiota with bile acid metabolism and its influence on disease states

scientific article

Intestinal lamina propria dendritic cells maintain T cell homeostasis but do not affect commensalism.

scientific article published on 09 September 2013

Isoeugenol monooxygenase and its putative regulatory gene are located in the eugenol metabolic gene cluster in Pseudomonas nitroreducens Jin1.

scientific article

Isolation and Characterization of a Novel Imidacloprid-Degrading Mycobacterium sp. Strain MK6 from an Egyptian Soil.

scientific article published on 12 May 2015

Isolation of mesotrione-degrading bacteria from aquatic environments in Brazil

article

Lack of evidence for the role of gut microbiota in PAH biodegradation by the polychaete Capitella teleta

scientific article published on 04 April 2020

Large scale analysis of virulence genes in Escherichia coli strains isolated from Avalon Bay, CA.

scientific article

Laser imaging for rapid Microbial Source Tracking.

scientific article

Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia.

scientific article

Letter to the Editor

Measurement and Modeling of Denitrification in Sand-Bed Streams under Various Land Uses

scientific article published on May 2014

Mechanisms of tolerance and high degradation capacity of the herbicide mesotrione by Escherichia coli strain DH5-α.

scientific article

Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different

scientific article

Metabolic Interference of sod gene mutations on catalase activity in Escherichia coli exposed to Gramoxone® (paraquat) herbicide.

scientific article published on 20 January 2017

Metabolism of polyhalogenated compounds by a genetically engineered bacterium

scientific article published in April 1994

Methanogenesis facilitated by geobiochemical iron cycle in a novel syntrophic methanogenic microbial community.

scientific article

Microbes in Beach Sands: Integrating Environment, Ecology and Public Health

scientific article

Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

scientific article published on 23 January 2017

Microbiota transplant therapy and autism: lessons for the clinic

scientific article published on 07 November 2019

Microbiota transplantation restores normal fecal bile acid composition in recurrent Clostridium difficile infection

scientific article

Microscale measurements reveal contrasting effects of photosynthesis and epiphytes on frictional drag on the surfaces of filamentous algae

scholarly article by Amy T. Hansen et al published 11 November 2013 in Freshwater Biology

Mineralization of the Bacillus thuringiensis Cry1Ac endotoxin in soil

scientific article published on 9 January 2008

Modeling the fate of antibiotic resistance genes and class 1 integrons during thermophilic anaerobic digestion of municipal wastewater solids

scientific article published on 19 October 2015

Molecular basis of a bacterial consortium: interspecies catabolism of atrazine

scientific article

Multi-laboratory evaluations of the performance of Catellicoccus marimammalium PCR assays developed to target gull fecal sources.

scientific article published on 5 July 2013

Multi-scale temporal and spatial variation in genotypic composition of Cladophora-borne Escherichia coli populations in Lake Michigan

scientific article published on 28 September 2010

Near-full length sequencing of 16S rDNA and RFLP indicates that Rhizobium etli is the dominant species nodulating Egyptian winter Berseem clover (Trifolium alexandrinum L.).

scientific article

Next-generation sequencing and culture-based techniques offer complementary insights into fungi and prokaryotes in beach sands.

scientific article published on 23 April 2017

Nodulation gene regulation and quorum sensing control density-dependent suppression and restriction of nodulation in the Bradyrhizobium japonicum-soybean symbiosis

scientific article

Notable decomposition products of senescing Lake Michigan Cladophora glomerata

article

Novel Microbial Assemblages Dominate Weathered Sulfide-Bearing Rock from Copper-Nickel Deposits in the Duluth Complex, Minnesota, USA.

scientific article published on 09 June 2017

Novel psbA1 gene from a naturally occurring atrazine-resistant cyanobacterial isolate

scientific article

Occurrence, Genetic Diversity, and Persistence of Enterococci in a Lake Superior Watershed ⬇️

scientific article published on March 1, 2013

On the origins of cyanuric acid hydrolase: purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP.

scientific article

Optimization of conditions for decolorization of azo-based textile dyes by multiple fungal species.

scientific article

Pathogenic Escherichia coli strains producing extended-spectrum β-lactamases in the Yeongsan River basin of South Korea.

scientific article published on 2 January 2013

Peptide-mediated shape- and size-tunable synthesis of gold nanostructures

scientific article

Photosynthetic Bradyrhizobium sp. strain ORS285 is capable of forming nitrogen-fixing root nodules on soybeans (Glycine max).

scientific article published on 25 January 2013

Phylogenetic Backgrounds and Virulence-Associated Traits of Escherichia coli Isolates from Surface Waters and Diverse Animals in Minnesota and Wisconsin

scientific article

Phylogenetic and phenotypic analyses of arsenic-reducing bacteria isolated from an old tin mine area in Thailand.

scientific article

Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSalpha, RSbeta and IS1631

scientific article published on 01 May 2003

Plasmid Localization and Organization of Melamine Degradation Genes in Rhodococcus sp. Strain Mel ⬇️

scientific article published on December 30, 2011

Plasmid Transfer between Spatially Separated Donor and Recipient Bacteria in Earthworm-Containing Soil Microcosms.

scientific article

Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae

scientific article

Population structure of Cladophora-borne Escherichia coli in nearshore water of Lake Michigan

scientific article

Population structure, persistence, and seasonality of autochthonous Escherichia coli in temperate, coastal forest soil from a Great Lakes watershed

scientific article

Practical considerations for sampling and data analysis in contemporary metagenomics-based environmental studies

scientific article published on 01 October 2018

Precipitation influences pathogenic bacteria and antibiotic resistance gene abundance in storm drain outfalls in coastal sub-tropical waters.

scientific article

Predicting recurrence of Clostridium difficile infection following encapsulated fecal microbiota transplantation

scientific article published on 18 September 2018

Predominant populations of indigenous soybean-nodulating Bradyrhizobium japonicum strains obtained from organic farming systems in Minnesota.

scientific article published on 23 March 2015

Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds.

scientific article published on January 2006

Presence and sources of fecal coliform bacteria in epilithic periphyton communities of Lake Superior

scientific article

Prevalence of season-specific Escherichia coli strains in the Yeongsan River Basin of South Korea.

scientific article

Prevalence of toxin-producing Clostridium botulinum associated with the macroalga Cladophora in three Great Lakes: growth and management

scientific article published on 8 January 2015

Proceedings of the 2013 A.S.P.E.N. Research workshop: the interface between nutrition and the gut microbiome: implications and applications for human health [corrected].

scientific article

Purification and characterization of TrzF: biuret hydrolysis by allophanate hydrolase supports growth

scientific article published on April 2006

Purification and characterization of allophanate hydrolase (AtzF) from Pseudomonas sp. strain ADP

scientific article published in June 2005

Purification, substrate range, and metal center of AtzC: the N-isopropylammelide aminohydrolase involved in bacterial atrazine metabolism.

scientific article published on October 2002

Putative Nitrogen-Fixing Bacteria Associated With the Rhizosphere and Root Endosphere of Wheat Plants Grown in an Andisol From Southern Chile

article

Quantitative microbial risk assessment of microbial source tracking markers in recreational water contaminated with fresh untreated and secondary treated sewage

scientific article

Rapid and complete degradation of the herbicide picloram by Lipomyces kononenkoae.

scientific article published in June 2009

Rapid method using two microbial enzymes for detection of L-abrine in food as a marker for the toxic protein abrin

scientific article

Regional Similarities and Consistent Patterns of Local Variation in Beach Sand Bacterial Communities throughout the Northern Hemisphere.

scientific article

Relationship between phylogenetic groups, genotypic clusters, and virulence gene profiles of Escherichia coli strains from diverse human and animal sources.

scientific article

Resolution of Severe Clostridium difficile Infection Following Sequential Fecal Microbiota Transplantation ⬇️

scientific article published on September 1, 2013

Room Temperature Growth of Salmonella enterica Serovar Saintpaul in Fresh Mexican Salsa

scientific article published on 01 January 2019

Sample size, library composition, and genotypic diversity among natural populations of Escherichia coli from different animals influence accuracy of determining sources of fecal pollution

scientific article

Seasonal and genotypic changes in escherichia coli phylogenetic groups in the Yeongsan River basin of South Korea

scientific article

Seasonal metabolic analysis of marine sediments collected from Moreton Bay in South East Queensland, Australia, using a multi-omics-based approach

article

Seasonal stability of Cladophora-associated Salmonella in Lake Michigan watersheds

scientific article published on 21 November 2008

Secretion systems and signal exchange between nitrogen-fixing rhizobia and legumes

scientific article (publication date: 2015)

Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1.

scientific article

Sediments and Soils Act as Reservoirs for Taxonomic and Functional Bacterial Diversity in the Upper Mississippi River

scientific article published on 15 February 2016

Select and resequence reveals relative fitness of bacteria in symbiotic and free-living environments.

scientific article published on 16 February 2018

Selection on horizontally transferred and duplicated genes in sinorhizobium (ensifer), the root-nodule symbionts of medicago

article

Selection on horizontally transferred and duplicated genes in sinorhizobium (ensifer), the root-nodule symbionts of medicago.

scientific article

Shift of bacterial community structure in two Thai soil series affected by silver nanoparticles using ARISA

scientific article published on 13 March 2014

Signal Disruption Leads to Changes in Bacterial Community Population

scientific article published on 29 March 2019

Silica gel-encapsulated AtzA biocatalyst for atrazine biodegradation

scientific article published on 07 January 2012

Simultaneous Synthesis of Temperature-Tunable Peptide and Gold Nanoparticle Hybrid Spheres

scientific article published on 09 June 2011

Site-specific distribution and competitive ability of indigenous bean-nodulating rhizobia isolated from organic fields in Minnesota

scientific article published on 21 September 2015

Sleeve gastrectomy drives persistent shifts in the gut microbiome

scientific article published on 4 January 2017

Solvent extraction characterization of bioavailability of atrazine residues in soils

scientific article published in October 2004

Source-Associated Gastroenteritis Risk from Swimming Exposure to Aging Fecal Pathogens

scientific article published on 30 December 2019

Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum

scientific article published on 9 June 2010

Spatial and temporal characterization of epiphytic microbial communities associated with Eurasian watermilfoil: a highly invasive macrophyte in North America

scientific article published on 01 November 2018

Species and genus level resolution analysis of gut microbiota in Clostridium difficile patients following fecal microbiota transplantation

scientific article

Species sorting and seasonal dynamics primarily shape bacterial communities in the Upper Mississippi River

scientific article published on 21 October 2014

Sphingobacterium sp. strain PM2-P1-29 harbours a functional tet(X) gene encoding for the degradation of tetracycline

scientific article published on 30 January 2009

Stable engraftment of human microbiota into mice with a single oral gavage following antibiotic conditioning.

scientific article published on August 2017

Standardized frozen preparation for transplantation of fecal microbiota for recurrent Clostridium difficile infection

scientific article

Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation

scientific article published in February 2018

Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.

scientific article published on 04 August 2017

Structure and diversity of arsenic resistant bacteria in an old tin mine area of Thailand

scientific article

Structure of bacterial communities in soil following cover crop and organic fertilizer incorporation

scientific article

Substrate specificity and colorimetric assay for recombinant TrzN derived from Arthrobacter aurescens TC1.

scientific article published on May 2005

Substrate specificity of atrazine chlorohydrolase and atrazine-catabolizing bacteria

scientific article

Successful Resolution of Recurrent Clostridium difficile Infection using Freeze-Dried, Encapsulated Fecal Microbiota; Pragmatic Cohort Study

scientific article published on 14 February 2017

Survival and Competitiveness of Bradyrhizobium japonicum Strains 20 Years after Introduction into Field Locations in Poland.

scientific article published on 5 June 2015

Synergy between quantitative microbial source tracking (qMST) and quantitative microbial risk assessment (QMRA): A review and prospectus

scientific article published on 08 July 2019

Synthesis and Biological Evaluation of Bile Acid Analogues Inhibitory to Clostridium difficile Spore Germination

scientific article

The ASM Journals Committee Values the Contributions of Black Microbiologists

scientific article published on 31 July 2020

The ASM Journals Committee Values the Contributions of Black Microbiologists

scholarly article published in 2020

The Bradyrhizobium japonicum nolA gene encodes three functionally distinct proteins

scientific article

The Diet and Gut Microbial Communities of Two Closely Related Combtooth Blennies, Chasmodes saburrae and Scartella cristata

The argRB of Escherichia coli is rare in isolates obtained from natural sources

scientific article published on 5 May 2006

The atrazine catabolism genes atzABC are widespread and highly conserved.

scientific article

The atzB gene of Pseudomonas sp. strain ADP encodes the second enzyme of a novel atrazine degradation pathway

scientific article

The complete replicons of 16 Ensifer meliloti strains offer insights into intra- and inter-replicon gene transfer, transposon-associated loci, and repeat elements.

scientific article

The deposit feeder Capitella teleta has a unique and relatively complex microbiome likely supporting its ability to degrade pollutants

scientific article published on 18 March 2019

The green alga, Cladophora, promotes Escherichia coli growth and contamination of recreational waters in Lake Michigan

scientific article published on 30 December 2009

The occurrence of virulence traits among high-level aminoglycosides resistant Enterococcus isolates obtained from feces of humans, animals, and birds in South Korea.

scientific article

The population structure of Escherichia coli isolated from subtropical and temperate soils.

scientific article published on 20 January 2012

The role of histidine 200 in MndD, the Mn(II)-dependent 3,4-dihydroxyphenylacetate 2,3-dioxygenase from Arthrobacter globiformis CM-2, a site-directed mutagenesis study

scientific article

The symbiovar trifolii of Rhizobium bangladeshense and Rhizobium aegyptiacum sp. nov. nodulate Trifolium alexandrinum in Egypt

scientific article

Therapeutic transplantation of the distal gut microbiota

scientific article published on 08 December 2010

Thermostable cyanuric acid hydrolase from Moorella thermoacetica ATCC 39073.

scientific article published on 18 September 2009

Toolbox Approaches Using Molecular Markers and 16S rRNA Gene Amplicon Data Sets for Identification of Fecal Pollution in Surface Water.

scientific article

Transcriptional Responses of Escherichia coli K-12 and O157:H7 Associated with Lettuce Leaves.

scientific article published in May 2012

Transcriptional and functional responses of Escherichia coli O157:H7 growing in the lettuce rhizoplane

scientific article published on 19 March 2013

Transcriptional and physiological responses of Bradyrhizobium japonicum to desiccation-induced stress

scientific article

Transcriptional control of the isoeugenol monooxygenase of Pseudomonas nitroreducens Jin1 in Escherichia coli

scientific article published on 7 October 2012

Transcriptional responses of Escherichia coli K-12 and O157:H7 associated with lettuce leaves

scientific article published on 13 January 2012

Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism

scientific article published on 9 August 2017

Transformation of tetracycline by TetX and its subsequent degradation in a heterologous host

scientific article published in June 2015

TrzN from Arthrobacter aurescens TC1 Is a zinc amidohydrolase

scientific article published on August 2006

Type IV Effector Proteins Involved in the Medicago-Sinorhizobium Symbiosis.

scientific article published on 5 December 2016

Urea Amendment Decreases Microbial Diversity and Selects for Specific Nitrifying Strains in Eight Contrasting Agricultural Soils.

scientific article published on 4 April 2018

Ursodeoxycholic Acid Inhibits Clostridium difficile Spore Germination and Vegetative Growth, and Prevents the Recurrence of Ileal Pouchitis Associated With the Infection.

scientific article published on 17 October 2015

Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds.

scientific article

Use of repetitive intergenic DNA sequences to classify pathogenic and disease-suppressive Streptomyces strains.

scientific article

Virulence and biodegradation potential of dynamic microbial communities associated with decaying Cladophora in Great Lakes.

scientific article published on 22 September 2016

Water and sediment act as reservoirs for microbial taxa associated with invasive dreissenid mussels

scientific article published on 02 November 2019

Waterfowl abundance does not predict the dominant avian source of beach Escherichia coli

scientific article

Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula

scientific article

Whole-genome transcriptional profiling of Bradyrhizobium japonicum during chemoautotrophic growth.

scientific article published on 08 August 2008

X-ray structure and mutational analysis of the atrazine Chlorohydrolase TrzN.

scientific article

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