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List of works by Ben Corry

A computational assessment of the permeability and salt rejection of carbon nanotube membranes and their application to water desalination

scientific article

A flexible approach to the calculation of resonance energy transfer efficiency between multiple donors and acceptors in complex geometries

scientific article

A functional correlate of severity in alternating hemiplegia of childhood

scientific article

A mechanical nanogate based on a carbon nanotube for reversible control of ion conduction

scientific article

A microfluidic platform to synthesize a G-quadruplex binding ligand.

scientific article published on 20 April 2009

A model of calcium channels

scientific article published on 01 December 2000

A model of sodium channels

scientific article published in February 2005

Accounting for dye diffusion and orientation when relating FRET measurements to distances: three simple computational methods.

scientific article

An energy-efficient gating mechanism in the acetylcholine receptor channel suggested by molecular and Brownian dynamics

scientific article

An entropic mechanism of generating selective ion binding in macromolecules

scientific article

An improved open-channel structure of MscL determined from FRET confocal microscopy and simulation ⬇️

scientific article published on October 1, 2010

Anomalous decline of water transport in covalently modified carbon nanotube membranes

scientific article published on 9 June 2011

Bacterial mechanosensitive channels: experiment and theory.

scientific article published on 6 July 2007

Binding and channeling of alternative substrates in the enzyme DmpFG: a molecular dynamics study.

scientific article

Bioinspired graphene nanopores with voltage-tunable ion selectivity for Na(+) and K(+).

scientific article published on 25 October 2013

Biological channeling of a reactive intermediate in the bifunctional enzyme DmpFG.

scientific article published on 21 February 2012

Brownian dynamics investigation into the conductance state of the MscS channel crystal structure.

scientific article

Brownian dynamics study of flux ratios in sodium channels

scientific article published on 02 July 2008

Comparing the Ability of Enhanced Sampling Molecular Dynamics Methods To Reproduce the Behavior of Fluorescent Labels on Proteins.

scientific article published in July 2015

Computational study of methyl group dynamics in the hydroquinoneclathrate of acetonitrile

article

Computational study of the transmembrane domain of the acetylcholine receptor.

scientific article published on 23 May 2009

Conduction mechanisms of chloride ions in ClC-type channels

scientific article

Conduction properties of KcsA measured using brownian dynamics with flexible carbonyl groups in the selectivity filter.

scientific article published on 13 April 2007

Conformational changes involved in MscL channel gating measured using FRET spectroscopy

scientific article

Designing carbon nanotube membranes for efficient water desalination

scientific article published on 29 December 2007

Determination of the Kinetic Profile of a Dinuclear Platinum Anticancer Complex in the Presence of Sulfate: Introducing a New Tool for the Expedited Analysis of 2D [1H, 15N] HSQC NMR Spectra ⬇️

scientific article published on November 10, 2010

Determination of the orientational distribution and orientation factor for transfer between membrane-bound fluorophores using a confocal microscope

scientific article published on 12 May 2006

Diamond nanopillar arrays for quantum microscopy of neuronal signals

scientific article published on 01 July 2020

Dielectric self-energy in Poisson-Boltzmann and Poisson-Nernst-Planck models of ion channels

scientific article

Do bifunctional labels solve the problem of dye diffusion in FRET analysis?

scientific article published in September 2014

Dynamics of fluorescent dyes attached to G-quadruplex DNA and their effect on FRET experiments

scientific article

Electrostatic basis of valence selectivity in cationic channels

scientific article published on 24 March 2005

Enhancing the efficacy of cation-independent mannose 6-phosphate receptor inhibitors by intracellular delivery

scientific article published in 2016

ExiFRET: flexible tool for understanding FRET in complex geometries ⬇️

scientific article published on 01 January 2012

Experimental Energy Barriers to Anions Transporting through Nanofiltration Membranes

FRET-Modulated Multihybrid Nanoparticles for Brightness-Equalized Single-Wavelength Barcoding

scientific article published on 28 June 2019

Fluorescent triphenyl substituted maleimide derivatives: synthesis, spectroscopy and quantum chemical calculations.

scientific article published in September 2010

How does overcoordination create ion selectivity?

scientific article

Identification of novel inhibitors of the amino acid transporter B0 AT1 (SLC6A19), a potential target to induce protein restriction and to treat type 2 diabetes.

scientific article

Influence of protein flexibility on the electrostatic energy landscape in gramicidin A.

scientific article

Intrinsic ion selectivity of narrow hydrophobic pores

scientific article published in May 2009

Investigating the size and dynamics of voltage-gated sodium channel fenestrations

scientific article

Locating the route of entry and binding sites of benzocaine and phenytoin in a bacterial voltage gated sodium channel

scientific article (publication date: July 2014)

Mapping the Importance of Four Factors in Creating Monovalent Ion Selectivity in Biological Molecules ⬇️

scientific article published on January 5, 2011

Mechanism of Concerted Hydrogen Bond Reorientation in Clathrates of Dianin’s Compound and Hydroquinone

scientific article published on 28 October 2011

Mechanism of ion permeation and selectivity in a voltage gated sodium channel

scientific article published on 12 January 2012

Mechanism of the dehydrogenase reaction of DmpFG and analysis of inter-subunit channeling efficiency and thermodynamic parameters in the overall reaction

scientific article published on 3 June 2013

Mechanisms of valence selectivity in biological ion channels.

scientific article

Mechanistic basis for multidrug resistance and collateral drug sensitivity conferred to the malaria parasite by polymorphisms in PfMDR1 and PfCRT

scientific article published on 04 May 2022

Molecular dynamics simulation of the partitioning of benzocaine and phenytoin into a lipid bilayer.

scientific article published on 14 December 2013

Molecular dynamics simulations of structure and dynamics of organic molecular crystals

scientific article published on 14 October 2010

Multi-ion versus single-ion conduction mechanisms can yield current rectification in biological ion channels

scientific article

Mutant bacterial sodium channels as models for local anesthetic block of eukaryotic proteins

scientific article published on 06 February 2016

MyoD-family inhibitor proteins act as auxiliary subunits of Piezo channels

scientific article published on 17 August 2023

Na+/Ca2+selectivity in the bacterial voltage-gated sodium channel NavAb ⬇️

scientific article published on February 12, 2013

Nanostructured carbon membranes for breakthrough filtration applications: advancing the science, engineering and design

scientific article published on February 2016

Permeation dynamics of chloride ions in the ClC-0 and ClC-1 channels

Pharmacological insights and quirks of bacterial sodium channels.

scientific article published on January 2014

Physical basis of specificity and delayed binding of a subtype selective sodium channel inhibitor

scientific article

Protonation state of inhibitors determines interaction sites within voltage-gated sodium channels.

scientific article published on 21 February 2018

Quantifying barriers to monovalent anion transport in narrow non-polar pores

Quantitative Förster resonance energy transfer efficiency measurements using simultaneous spectral unmixing of excitation and emission spectra

scientific article

Redox control of calcium channels: from mechanisms to therapeutic opportunities.

scientific article published on April 2007

Response to Comment on “Experimental Energy Barriers to Anions Transporting through Nanofiltration Membranes”

Role of acetylcholine receptor domains in ion selectivity.

scientific article published on 3 May 2009

Simulation of structure, orientation, and energy transfer between AlexaFluor molecules attached to MscL

scientific article published on 30 May 2008

Simulations of guest transport in clathrates of Dianin's compound and hydroquinone

scientific article published on 7 January 2013

Solvent Transport Behavior of Shear Aligned Graphene Oxide Membranes and Implications in Organic Solvent Nanofiltration.

scientific article published on 18 December 2017

Structural investigation of MscL gating using experimental data and coarse grained MD simulations

scientific article

TLR7 gain-of-function genetic variation causes human lupus

scientific article published on 27 April 2022

Test of Poisson-Nernst-Planck theory in ion channels

scientific article published on October 1999

Testing the applicability of Nernst-Planck theory in ion channels: comparisons with Brownian dynamics simulations.

scientific article

Tests of continuum theories as models of ion channels. I. Poisson-Boltzmann theory versus Brownian dynamics.

scientific article

The Importance of Dehydration in Determining Ion Transport in Narrow Pores

The confined space inside carbon nanotubes can dictate the stereo- and regioselectivity of Diels-Alder reactions

scientific article published on 06 March 2014

The naked truth about K+ selectivity

scientific article published on 01 August 2018

The predominant role of coordination number in potassium channel selectivity

scientific article

The role of MscL amphipathic N terminus indicates a blueprint for bilayer-mediated gating of mechanosensitive channels

scientific article

The role of thermodynamics and kinetics in ligand binding to G-quadruplex DNA

scientific article published on July 27, 2012

Understanding ion channel selectivity and gating and their role in cellular signalling.

scientific article published on 2 October 2006

Unraveling the relationship between structure and stabilization of triarylpyridines as G-quadruplex binding ligands

scientific article published on 13 July 2011

Voltage-Gated Sodium Channel Pharmacology: Insights From Molecular Dynamics Simulations.

scientific article published on 31 March 2017

What have we learnt about the mechanisms of rapid water transport, ion rejection and selectivity in nanopores from molecular simulation?

scientific article published on April 2014

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