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List of works by Jason E. Shoemaker

A comprehensive map of the influenza A virus replication cycle

scientific article

Adding protein context to the human protein-protein interaction network to reveal meaningful interactions.

scientific article

CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data

scientific article

Chemical hazard prediction and hypothesis testing using quantitative adverse outcome pathways

scientific article published on 16 October 2018

Disease severity is associated with differential gene expression at the early and late phases of infection in nonhuman primates infected with different H5N1 highly pathogenic avian influenza viruses

scientific article

Identifying fragilities in biochemical networks: robust performance analysis of Fas signaling-induced apoptosis.

scientific article published on 6 June 2008

Influenza virus-host interactome screen as a platform for antiviral drug development

scientific article published on 20 November 2014

Integrated network analysis reveals a novel role for the cell cycle in 2009 pandemic influenza virus-induced inflammation in macaque lungs ⬇️

scientific article published on August 31, 2012

Mathematical Modeling of the cGAS Pathway Reveals Robustness of DNA Sensing to TREX1 Feedback

scientific article published on 03 November 2018

Multi-spectral fluorescent reporter influenza viruses (Color-flu) as powerful tools for in vivo studies

scientific article

Multicellular spatial model of RNA virus replication and interferon responses reveals factors controlling plaque growth dynamics

scientific article published on 25 October 2021

Network Controllability-Based Prioritization of Candidates for SARS-CoV-2 Drug Repositioning

scientific article published on 26 September 2020

Network perturbation analysis of gene transcriptional profiles reveals protein targets and mechanism of action of drugs and influenza A viral infection

scientific article published on 9 January 2018

Rapid community-driven development of a SARS-CoV-2 tissue simulator ⬇️

scientific article published on 06 April 2020

The dynamics of single-substrate continuous cultures: the role of transport enzymes

scientific article

Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases.

scientific article published on 28 July 2011

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