List of works - Pietro Faccioli

All-atom simulation of the HET-s prion replication

scientific article published on 18 September 2020

Characterization of protein folding by dominant reaction pathways

scientific article published on 15 October 2008

Communications: Ab initio dynamics of rare thermally activated reactions.

scientific article published in March 2010

Dominant folding pathways of a WW domain.

scientific article published on 26 January 2012

Dominant folding pathways of a peptide chain from ab initio quantum-mechanical simulations

scientific article published on 01 January 2011

Dominant pathways in protein folding.

scientific article published on 6 September 2006

Dominant reaction pathways in high-dimensional systems

scientific article published in February 2009

Dominant reaction pathways in protein folding: A direct validation against molecular dynamics simulations.

scientific article published in July 2010

Fluctuations in the ensemble of reaction pathways

scientific article published on 01 April 2011

Folding pathways of a knotted protein with a realistic atomistic force field

scientific article

Microscopic calculation of absorption spectra of macromolecules: An analytic approach

scientific article published on 01 April 2019

Microscopically computing free-energy profiles and transition path time of rare macromolecular transitions

scientific article published on 28 December 2012

Molecular Mechanisms of Activation in the Orange Carotenoid Protein Revealed by Molecular Dynamics

scientific article published on 17 December 2020

Molecular dynamics at low time resolution ⬇️

scientific article published on October 28, 2010

Molecular dynamics simulation suggests possible interaction patterns at early steps of beta2-microglobulin aggregation.

scientific article published on 8 December 2006

Quantitative protein dynamics from dominant folding pathways

scientific article published on 12 September 2007

Quantum charge transport and conformational dynamics of macromolecules

scientific article published in June 2012

Quantum diffusive dynamics of macromolecular transitions

scientific article published on 01 July 2011

Serpin latency transition at atomic resolution

scientific article

Simulating stochastic dynamics using large time steps

scientific article published on 9 December 2009

The role of non-native interactions in the folding of knotted proteins

scientific article

The role of non-native interactions in the folding of knotted proteins: insights from molecular dynamics simulations

scientific article published on 24 December 2013

Variational scheme to compute protein reaction pathways using atomistic force fields with explicit solvent.

scientific article published on 4 March 2015

List of works by Pietro Faccioli

All-atom simulation of the HET-s prion replication

Characterization of protein folding by dominant reaction pathways

Communications: Ab initio dynamics of rare thermally activated reactions.

Dominant folding pathways of a WW domain.

Dominant folding pathways of a peptide chain from ab initio quantum-mechanical simulations

Dominant pathways in protein folding.

Dominant reaction pathways in high-dimensional systems

Dominant reaction pathways in protein folding: A direct validation against molecular dynamics simulations.

Fluctuations in the ensemble of reaction pathways

Folding pathways of a knotted protein with a realistic atomistic force field

Microscopic calculation of absorption spectra of macromolecules: An analytic approach

Microscopically computing free-energy profiles and transition path time of rare macromolecular transitions

Molecular Mechanisms of Activation in the Orange Carotenoid Protein Revealed by Molecular Dynamics

Molecular dynamics at low time resolution ⬇️

Molecular dynamics simulation suggests possible interaction patterns at early steps of beta2-microglobulin aggregation.

Quantitative protein dynamics from dominant folding pathways

Quantum charge transport and conformational dynamics of macromolecules

Quantum diffusive dynamics of macromolecular transitions

Serpin latency transition at atomic resolution

Simulating stochastic dynamics using large time steps

The role of non-native interactions in the folding of knotted proteins

The role of non-native interactions in the folding of knotted proteins: insights from molecular dynamics simulations

Variational scheme to compute protein reaction pathways using atomistic force fields with explicit solvent.