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List of works by Bas Teusink

'Slave' metabolites and enzymes. A rapid way of delineating metabolic control

scientific article

A Multiphase Multiobjective Dynamic Genome-Scale Model Shows Different Redox Balancing among Yeast Species of the <i>Saccharomyces</i> Genus in Fermentation

scientific article published on 03 August 2021

A Specific Mutation in the Promoter Region of the Silent cel Cluster Accounts for the Appearance of Lactose-Utilizing Lactococcus lactis MG1363 ⬇️

scientific article published on June 1, 2012

A centrifugation-based clearing method allows high-throughput acidification and growth-rate measurements in milk

scientific article published in 2021

A critical view of metabolic network adaptations

scientific article published on 03 December 2008

A data integration and visualization resource for the metabolic network of Synechocystis sp. PCC 6803.

scientific article

A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations

scientific article (publication date: 2001)

A genome-scale metabolic network of the aroma bacterium Leuconostoc mesenteroides subsp. cremoris

scientific article published on 02 February 2019

A novel consortium of Lactobacillus rhamnosus and Streptococcus thermophilus for increased access to functional fermented foods

scientific article

A practical guide to genome-scale metabolic models and their analysis

scientific article published in January 2011

A proteome-integrated, carbon source dependent genetic regulatory network in Saccharomyces cerevisiae

scientific article published on 01 February 2020

A systematic assessment of current genome-scale metabolic reconstruction tools

scientific article published on 07 August 2019

Accelerating the reconstruction of genome-scale metabolic networks

scientific article published on 13 June 2006

Acute inhibition of hepatic beta-oxidation in APOE*3Leiden mice does not affect hepatic VLDL secretion or insulin sensitivity

scientific article

Adaption to glucose limitation is modulated by the pleotropic regulator CcpA, independent of selection pressure strength

scientific article published on 10 January 2019

Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model

scientific article published on 24 October 2006

Apolipoprotein C3 deficiency results in diet-induced obesity and aggravated insulin resistance in mice

scientific article published in March 2005

Around the growth phase transition S. cerevisiae's make-up favours sustained oscillations of intracellular metabolites

scientific article published on 01 February 1993

Availability of public goods shapes the evolution of competing metabolic strategies

scientific article published on 12 August 2013

Bet-hedging during bacterial diauxic shift

scientific article

Binding proteins enhance specific uptake rate by increasing the substrate-transporter encounter rate

scientific article published on 24 April 2015

Bioinformatics and systems biology: bridging the gap between heterogeneous student backgrounds

scientific article published on 19 April 2013

CD36 deficiency increases insulin sensitivity in muscle, but induces insulin resistance in the liver in mice

scientific article published on 16 August 2003

Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry

scientific article published on 01 September 2000

Co-regulation of metabolic genes is better explained by flux coupling than by network distance

scientific article

Community flux balance analysis for microbial consortia at balanced growth

scientific article

Comparative systems biology: from bacteria to man ⬇️

scientific article published on September 1, 2010

Compartmentation protects trypanosomes from the dangerous design of glycolysis

scholarly article

Constraint-based stoichiometric modelling from single organisms to microbial communities.

scientific article published on November 2016

Contribution of fatty acids released from lipolysis of plasma triglycerides to total plasma fatty acid flux and tissue-specific fatty acid uptake.

scientific article published in March 2003

Control analysis of glycolytic oscillations

scientific article published in November 1996

Control and regulation of metabolic fluxes in microbes by substrates and enzymes

scientific article published in January 1993

Control of frequency and amplitudes is shared by all enzymes in three models for yeast glycolytic oscillations

scientific article published on 01 July 1996

Correlation between sequence conservation and the genomic context after gene duplication

scientific article

Correlation between sequence conservation and the genomic context after gene duplication.

scientific article

Development of a minimal growth medium for Lactobacillus plantarum

scientific article published in January 2010

Dynamic elementary mode modelling of non-steady state flux data.

scientific article published on 18 June 2018

Effect of amino acid availability on vitamin B12 production in Lactobacillus reuteri

scientific article

Elementary Growth Modes provide a molecular description of cellular self-fabrication

scientific article published on 27 January 2020

Evolutionary engineering to enhance starter culture performance in food fermentations

scientific article published on 29 September 2014

Evolutionary pressures on microbial metabolic strategies in the chemostat

scientific article

Exploring metabolic pathway reconstruction and genome-wide expression profiling in Lactobacillus reuteri to define functional probiotic features

scientific article (publication date: 29 April 2011)

FAME, the Flux Analysis and Modeling Environment

scientific article

Fatal attraction in glycolysis: how Saccharomyces cerevisiae manages sudden transitions to high glucose.

scientific article published on 20 February 2014

Finding Functional Differences Between Species in a Microbial Community: Case Studies in Wine Fermentation and Kefir Culture

scientific article published on 25 June 2019

Functional identification in Lactobacillus reuteri of a PocR-like transcription factor regulating glycerol utilization and vitamin B12 synthesis

scientific article

Further Elucidation of Galactose Utilization in MG1363

scientific article published on 03 August 2018

Gene network requirements for regulation of metabolic gene expression to a desired state

scientific article published on January 2013

Genome data mining of lactic acid bacteria: the impact of bioinformatics

scientific article

Genome-Scale Metabolic Reconstruction of Acetobacter pasteurianus 386B, a Candidate Functional Starter Culture for Cocoa Bean Fermentation

scientific article published on 05 December 2019

Genome-scale model of Streptococcus thermophilus LMG18311 for metabolic comparison of lactic acid bacteria

scientific article published on 3 April 2009

Genome-scale reconstruction of the Streptococcus pyogenes M49 metabolic network reveals growth requirements and indicates potential drug targets

scientific article published on 9 March 2016

How fast-growing bacteria robustly tune their ribosome concentration to approximate growth-rate maximization

scientific article published on 26 March 2015

Hyperlipidemia in APOE2 transgenic mice is ameliorated by a truncated apoE variant lacking the C-terminal domain.

scientific article published on 16 October 2002

In silico reconstruction of the metabolic pathways of Lactobacillus plantarum: comparing predictions of nutrient requirements with those from growth experiments.

scientific article

In vivo characterisation of fluorescent proteins in budding yeast

scientific article published on 19 February 2019

Increased hepatic insulin sensitivity together with decreased hepatic triglyceride stores in hormone-sensitive lipase-deficient mice

scientific article

Inferring differences in the distribution of reaction rates across conditions

scientific article published on 11 July 2012

Interplay between constraints, objectives, and optimality for genome-scale stoichiometric models

scientific article published on 7 April 2015

Intestinal lipid absorption is not affected in CD36 deficient mice

scientific article published on 01 October 2002

Lactic Acid Bacteria: embarking on 30 more years of research

scientific article published on 29 August 2014

Leptin deficiency per se dictates body composition and insulin action in ob/ob mice.

scientific article published on January 2008

Lost in Transition: Start-Up of Glycolysis Yields Subpopulations of Nongrowing Cells

scientific article published in Science

Low affinity uniporter carrier proteins can increase net substrate uptake rate by reducing efflux

scientific article published on 3 April 2018

MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 March 2020

Maintaining maximal metabolic flux by gene expression control

article

MetDFBA: incorporating time-resolved metabolomics measurements into dynamic flux balance analysis

scientific article

Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community

scientific article published in 2021

Metabolic models for rational improvement of lactic acid bacteria as cell factories.

scientific article

Metabolic shifts: a fitness perspective for microbial cell factories

scientific article published on 31 August 2012

Metabolic states with maximal specific rate carry flux through an elementary flux mode

scientific article published on 12 February 2014

Metabolism at evolutionary optimal States.

scientific article published on 02 June 2015

Metabolite Depletion Affects Flux Profiling of Cell Lines

scientific article published on 12 April 2018

Microbial competition reduces metabolic interaction distances to the low µm-range

scientific article published on 19 October 2020

Microdroplet screening and selection for improved microbial production of extracellular compounds

scientific article published on 24 November 2019

Model-based quantification of metabolic interactions from dynamic microbial-community data

scientific article

Monte-Carlo modeling of the central carbon metabolism of Lactococcus lactis: insights into metabolic regulation

scientific article

Multi-tasking of biosynthetic and energetic functions of glycolysis explained by supply and demand logic

scientific article

Optimality principles in the regulation of metabolic networks

scientific article published on 29 August 2012

PAPD5-mediated 3' adenylation and subsequent degradation of miR-21 is disrupted in proliferative disease.

scientific article

Predicting metabolic fluxes using gene expression differences as constraints

scientific article published in January 2011

Probing the genome-scale metabolic landscape of Bordetella pertussis, the causative agent of whooping cough.

scientific article published on 25 August 2017

Protein costs do not explain evolution of metabolic strategies and regulation of ribosomal content: does protein investment explain an anaerobic bacterial Crabtree effect?

scientific article published on 9 May 2015

Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments

scientific article published on 01 April 2021

Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments

scientific article published on 16 October 2020

Public goods and metabolic strategies

scientific article

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 April 2020

Quantitative analysis of amino acid metabolism in liver cancer links glutamate excretion to nucleotide synthesis

scientific article published on 27 April 2020

Role of phosphate in the central metabolism of two lactic acid bacteria--a comparative systems biology approach

scientific article

Selection for Cell Yield Does Not Reduce Overflow Metabolism in <i>Escherichia coli</i>

scientific article published in 2021

Shifts in growth strategies reflect tradeoffs in cellular economics

scientific article published on 3 November 2009

Standardized assay medium to measure Lactococcus lactis enzyme activities while mimicking intracellular conditions

scientific article published on 21 October 2011

Strategies for structuring interdisciplinary education in Systems Biology: an European perspective.

scientific article

Synchronized Heat Flux Oscillations in Yeast Cell Populations

scientific article published in Journal of Biological Chemistry

Systems biology from micro-organisms to human metabolic diseases: the role of detailed kinetic models.

scientific article published in October 2010

Systems biology of lactic acid bacteria: a critical review.

scientific article published on 30 August 2011

Systems modeling approaches for microbial community studies: from metagenomics to inference of the community structure

scientific article published on 19 March 2015

The VLDL receptor plays a major role in chylomicron metabolism by enhancing LPL-mediated triglyceride hydrolysis

scientific article

The danger of metabolic pathways with turbo design

scientific journal article

The evidence that pseudovitamin B12is biologically active in mammals is still lacking - a comment on Molinaet al.’s (2009) experimental design

article

The number of active metabolic pathways is bounded by the number of cellular constraints at maximal metabolic rates

scientific article published on 11 March 2019

The transport of triglycerides through the secretory pathway of hepatocytes is impaired in apolipoprotein E deficient mice

scientific article published in April 2004

Thioredoxin reductase is a key factor in the oxidative stress response of Lactobacillus plantarum WCFS1.

scientific article published on 28 August 2007

Towards metagenome-scale models for industrial applications--the case of Lactic Acid Bacteria

scientific article

Training for translation between disciplines: a philosophy for life and data sciences curricula.

scientific article published in July 2018

Understanding bistability in yeast glycolysis using general properties of metabolic pathways.

scientific article published on 21 June 2014

Understanding regulation of metabolism through feasibility analysis.

scientific article

Understanding start-up problems in yeast glycolysis

scientific article published on 14 March 2018

Understanding the adaptive growth strategy of Lactobacillus plantarum by in silico optimisation

scientific article

Understanding the physiology of Lactobacillus plantarum at zero growth

scientific article

Using a genome-scale metabolic model of Enterococcus faecalis V583 to assess amino acid uptake and its impact on central metabolism

scientific article published on 19 December 2014

Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies

scientific article published on 10 February 2022

Yeast cells with a specific cellular make-up and an environment that removes acetaldehyde are prone to sustained glycolytic oscillations

scientific article published on 01 March 1994

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