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List of works by John Chilton

A community effort to create standards for evaluating tumor subclonal reconstruction

scientific article published on 09 January 2020

CLIA-certified next-generation sequencing analysis in the cloud.

scientific article published in October 2012

Common Workflow Language

open standards project

Community-Driven Data Analysis Training for Biology

scientific article published on 01 June 2018

Enhancing pre-defined workflows with ad hoc analytics using Galaxy, Docker and Jupyter

Galaxy External Display Applications: closing a dataflow interoperability loop

scientific article published on 01 February 2020

Implementation of Cloud based next generation sequencing data analysis in a clinical laboratory.

scientific article

Jupyter and Galaxy: Easing entry barriers into complex data analyses for biomedical researchers.

scientific article

Methods included: Standardizing computational reuse and portability with the Common Workflow Language

scientific article published in June 2022

Multi-omic data analysis using Galaxy.

scientific article

NCBI BLAST+ integrated into Galaxy.

scientific article published on 25 August 2015

No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics

scientific article published on 13 August 2020

Practical Computational Reproducibility in the Life Sciences

scientific article published on 01 June 2018

Practical computational reproducibility in the life sciences

scientific article published on 10 October 2017

Reproducible biomedical benchmarking in the cloud: lessons from crowd-sourced data challenges

scientific article published on 10 September 2019

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

scientific article

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update.

scientific article published in July 2018