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List of works by Susanna Manrubia

A trade-off between neutrality and adaptability limits the optimization of viral quasispecies

scientific article published on 5 August 2009

Adaptive multiscapes: an up-to-date metaphor to visualize molecular adaptation

scientific article published on 28 February 2017

Adding levels of complexity enhances robustness and evolvability in a multilevel genotype-phenotype map.

scientific article published in January 2018

At the boundary between biological and cultural evolution: the origin of surname distributions

scientific article published in June 2002

Biodiversity in model ecosystems, I: coexistence conditions for competing species

scientific article

Biodiversity in model ecosystems, II: species assembly and food web structure.

scientific article

Collective properties of evolving molecular quasispecies

scientific article

Correction: Topological Structure of the Space of Phenotypes: The Case of RNA Neutral Networks

Correction: Topological Structure of the Space of Phenotypes: The Case of RNA Neutral Networks

Correction: Topological Structure of the Space of Phenotypes: The Case of RNA Neutral Networks.

scientific article published on 13 December 2011

Correction: Topological Structure of the Space of Phenotypes: The Case of RNA Neutral Networks.

scientific article

Criticality and scaling in evolutionary ecology

scientific article published in April 1999

Demography-based adaptive network model reproduces the spatial organization of human linguistic groups. ⬇️

scientific article

Differences in adaptive dynamics determine the success of virus variants that propagate together

scientific article published on 9 January 2018

Disentangling the effects of selection and loss bias on gene dynamics

scientific article

Distribution of genotype network sizes in sequence-to-structure genotype-phenotype maps ⬇️

scientific article

Diversity patterns from ecological models at dynamical equilibrium

scientific article published in September 2001

Effects of Spatial Competition on the Diversity of a Quasispecies

scientific article published on 25 January 2008

Efficient HIV-1 inhibition by a 16 nt-long RNA aptamer designed by combining in vitro selection and in silico optimisation strategies.

scientific article

Enumerating secondary structures and structural moieties for circular RNAs ⬇️

scientific article

Epistasis between cultural traits causes paradigm shifts in cultural evolution

scientific article published on 19 February 2020

Evolution on neutral networks accelerates the ticking rate of the molecular clock

scientific article

Evolutionary Dynamics in the RNA Bacteriophage Qβ Depends on the Pattern of Change in Selective Pressures

scientific article published on 18 June 2019

Evolutionary dynamics of genome segmentation in multipartite viruses.

scientific article published on 4 July 2012

Evolutionary dynamics on networks of selectively neutral genotypes: effects of topology and sequence stability

scientific article published on 14 December 2009

Evolutionary transition toward defective RNAs that are infectious by complementation.

scientific article published on November 2004

Extinction and self-organized criticality in a model of large-scale evolution

scientific article published on 01 July 1996

Fat tails and black swans: Exact results for multiplicative processes with resets

scientific article published on 01 March 2020

Fitness distributions in exponentially growing asexual populations

scientific article published on 8 May 2003

Getting to Know Viral Evolutionary Strategies: Towards the Next Generation of Quasispecies Models

scientific article published on 14 August 2015

High mutation rates, bottlenecks, and robustness of RNA viral quasispecies

scientific article

Influence of mutagenesis and viral load on the sustained low-level replication of an RNA virus

scientific article published on 19 January 2011

Internal Disequilibria and Phenotypic Diversification during Replication of Hepatitis C Virus in a Noncoevolving Cellular Environment

scientific article published on 8 March 2017

Large-scale genomic analysis suggests a neutral punctuated dynamics of transposable elements in bacterial genomes.

scientific article

Modeling viral genome fitness evolution associated with serial bottleneck events: evidence of stationary states of fitness

scientific article published on September 2002

Modelling viral evolution and adaptation: challenges and rewards.

scientific article published on 15 July 2012

Modular evolution and increase of functional complexity in replicating RNA molecules

scientific article published on 14 November 2006

Motif frequency and evolutionary search times in RNA populations

scientific article published on 21 March 2011

Mutual synchronization and clustering in randomly coupled chaotic dynamical networks

scientific article published in August 1999

Neutral networks and chemical function in RNA: Comment on "Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life".

scientific article published on 7 June 2012

New patterns in human biogeography revealed by networks of contacts between linguistic groups.

scientific article published in March 2015

On the Genealogy of a Population of Biparental Individuals

scientific article published on 01 April 2000

On the networked architecture of genotype spaces and its critical effects on molecular evolution

scientific article published on 01 July 2018

On the structural repertoire of pools of short, random RNA sequences

scientific article published on 10 March 2008

Parsimonious Scenario for the Emergence of Viroid-Like Replicons De Novo

scientific article

Pathways to extinction: beyond the error threshold

scientific article published on June 2010

Phenotypic effect of mutations in evolving populations of RNA molecules

scientific article

Populations of genetic circuits are unable to find the fittest solution in a multilevel genotype-phenotype map

scientific article published on 03 June 2020

Potential benefits of sequential inhibitor-mutagen treatments of RNA virus infections

scientific article

Quasispecies dynamics and RNA virus extinction

scientific article

Reconstructing evolutionary relationships from functional data: a consistent classification of organisms based on translation inhibition response.

scientific article

Reply from R.V. Solé, S.C. Manrubia, M.J. Benton, S. Kauffman and P. Bak

scientific article published in August 1999

Resistance of virus to extinction on bottleneck passages: study of a decaying and fluctuating pattern of fitness loss

scientific article

River density and landscape roughness are universal determinants of linguistic diversity

scientific article published in 2014

River density and landscape roughness are universal determinants of linguistic diversity.

scientific article published on 16 April 2014

Role of demographic dynamics and conflict in the population-area relationship for human languages

scientific article

Self-similarity in rain forests: Evidence for a critical state

article

Self-similarity of extinction statistics in the fossil record

scientific article published in Nature

Severe Hindrance of Viral Infection Propagation in Spatially Extended Hosts ⬇️

scientific article published on August 23, 2011

Shape of ecological networks

scientific article published in May 2001

Spiders: water-driven erosive structures in the southern hemisphere of Mars

scientific article

Stochastic multiplicative processes with reset events

scientific article published in May 1999

Struggle for Space: Viral Extinction through Competition for Cells

article

Supercritical branching processes and the role of fluctuations under exponential population growth ⬇️

scientific article published on December 21, 2003

Suppression of viral infectivity through lethal defection

scientific article

Tempo and mode of inhibitor-mutagen antiviral therapies: a multidisciplinary approach

scientific article

The dawn of the RNA World: toward functional complexity through ligation of random RNA oligomers

scientific article published on 24 March 2009

The impact of quasispecies dynamics on the use of therapeutics ⬇️

scientific article published on September 16, 2012

The space of genotypes is a network of networks: implications for evolutionary and extinction dynamics

scientific article published on 23 October 2017

The turning point and end of an expanding epidemic cannot be precisely forecast

scientific article published on 01 October 2020

The vast unknown microbial biosphere

scientific article (publication date: 2 June 2016)

Tipping points and early warning signals in the genomic composition of populations induced by environmental changes.

scientific article

Topological structure of the space of phenotypes: the case of RNA neutral networks

scientific article

Variable mutation rates as an adaptive strategy in replicator populations

scientific article

Viral genome segmentation can result from a trade-off between genetic content and particle stability

scientific article

What's in a name?: Comment on "Surname distribution in population genetics and in statistical physics".

scientific article published on 30 July 2013

toyLIFE: a computational framework to study the multi-level organisation of the genotype-phenotype map. ⬇️

scientific article published on 18 December 2014

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