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List of works by Markus Diesmann

25th Annual Computational Neuroscience Meeting: CNS-2016

scientific article

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3.

scientific article

A Collaborative Simulation-Analysis Workflow for Computational Neuroscience Using HPC

A compositionality machine realized by a hierarchic architecture of synfire chains

scientific article published on 5 January 2011

A comprehensive workflow for general-purpose neural modeling with highly configurable neuromorphic hardware systems

scientific article

A general and efficient method for incorporating precise spike times in globally time-driven simulations

scientific article

A model for correlation detection based on Ca2+ concentration in spines.

scientific article published on 6 July 2007

A multi-scale layer-resolved spiking network model of resting-state dynamics in macaque visual cortical areas

scientific article published on 18 October 2018

A reafferent and feed-forward model of song syntax generation in the Bengalese finch

scientific article

A reafferent model of song syntax generation in the Bengalese finch

scientific article

A spiking neural network model of an actor-critic learning agent

scientific article

A testsuite for a neural simulation engine

article

A unified framework for spiking and gap-junction interactions in distributed neuronal network simulations

scientific article published on 09 September 2015

A unified view on weakly correlated recurrent networks

scientific article published on 18 October 2013

Activity dynamics and propagation of synchronous spiking in locally connected random networks.

scientific article published in May 2003

Advancing the boundaries of high-connectivity network simulation with distributed computing

scientific article published in August 2005

An imperfect dopaminergic error signal can drive temporal-difference learning

scientific article

Breaking synchrony by heterogeneity in complex networks

scientific article published on 18 February 2004

CoCoMac 2.0 and the future of tract-tracing databases ⬇️

scientific article published on December 27, 2012

Compositionality in neural control: an interdisciplinary study of scribbling movements in primates ⬇️

scientific article published on 12 September 2013

Compositionality of arm movements can be realized by propagating synchrony

scientific article published on 16 October 2010

Computational Neuroscience: Mathematical and Statistical Perspectives

scientific article published on 08 December 2017

Constructing Neuronal Network Models in Massively Parallel Environments

scientific article published on 16 May 2017

Correction to: Multi-scale account of the network structure of macaque visual cortex

scientific article published on 12 February 2020

Correlation transmission of spiking neurons is boosted by synchronous input

scientific article

Correlations and population dynamics in cortical networks

scientific article published in September 2008

Corrigendum: Extremely Scalable Spiking Neuronal Network Simulation Code: From Laptops to Exascale Computers

scientific article published on 04 July 2018

Criteria on Balance, Stability, and Excitability in Cortical Networks for Constraining Computational Models

Decorrelation of low-frequency neural activity by inhibitory feedback

scientific article published on 20 July 2010

Decorrelation of neural-network activity by inhibitory feedback

scientific article

Dependence of Neuronal Correlations on Filter Characteristics and Marginal Spike Train Statistics

article

Detecting synfire chain activity using massively parallel spike train recording

scientific article

Detecting synfire chains in parallel spike data.

scientific article

Deterministic networks for probabilistic computing

scientific article published on 04 December 2019

Deterministic neural networks as sources of uncorrelated noise for probabilistic computations

scientific article published on 4 December 2015

Dynamic effective connectivity in cortically embedded systems of recurrently coupled synfire chains

scientific article published on 11 November 2015

Echoes in correlated neural systems

Effect of Heterogeneity on Decorrelation Mechanisms in Spiking Neural Networks: A Neuromorphic-Hardware Study ⬇️

Effective connectivity analysis explains metastable states of ongoing activity in cortically embedded systems of coupled synfire chains

scientific article published on 4 December 2015

Effectiveness of systematic spike dithering depends on the precision of cortical synchronization

scientific article published on 7 May 2008

Efficient Communication in Distributed Simulations of Spiking Neuronal Networks With Gap Junctions

scientific article published on 05 May 2020

Efficient Parallel Simulation of Large-Scale Neuronal Networks on Clusters of Multiprocessor Computers

Enabling functional neural circuit simulations with distributed computing of neuromodulated plasticity

scientific article

Equilibrium and Response Properties of the Integrate-and-Fire Neuron in Discrete Time

scientific article published on 4 January 2010

Erratum to “Dynamical changes and temporal precision of synchronized spiking activity in monkey motor cortex during movement preparation” [Journal of Physiology-Paris 94 (5–6) pp. 569–582 (2000)]☆

scholarly article published in Journal of Physiology (Paris)

Estimating the contribution of assembly activity to cortical dynamics from spike and population measures

scientific article

Evoked potentials in motor cortical local field potentials reflect task timing and behavioral performance.

scientific article published on 8 September 2010

Exact subthreshold integration with continuous spike times in discrete-time neural network simulations

scientific article

Extremely Scalable Spiking Neuronal Network Simulation Code: From Laptops to Exascale Computers.

scientific article published on 16 February 2018

Fail-safe detection of threshold crossings of linear integrate-and-fire neuron models in time-driven simulations

scientific article

Finite post synaptic potentials cause a fast neuronal response

scientific article published on 24 February 2011

From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations

scientific article published on 8 July 2013

Functional consequences of non-equilibrium dynamics caused by antisymmetric and symmetric learning rules

scientific article published on 4 December 2015

Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome ⬇️

scientific article

High storage capacity of synfire chains in large-scale cortical networks of conductance-based spiking neurons.

scientific article published on 20 July 2010

High-Performance Computing in Neuroscience for Data-Driven Discovery, Integration, and Dissemination

scientific article

High-capacity embedding of synfire chains in a cortical network model

scientific article published on 11 August 2012

How local is the local field potential?

How pattern formation in ring networks of excitatory and inhibitory spiking neurons depends on the input current regime

scientific article published on January 2013

How pattern formation in ring networks of excitatory and inhibitory spiking neurons depends on the input current regime.

scientific article published on 8 July 2013

Hybrid Scheme for Modeling Local Field Potentials from Point-Neuron Networks

scientific article published on 20 October 2016

Hybrid scheme for modeling LFPs from spiking cortical network models.

scientific article published on 8 July 2013

Hybrid scheme for modeling local field potentials from point-neuron networks

scientific article published on 4 December 2015

Identifying Anatomical Origins of Coexisting Oscillations in the Cortical Microcircuit ⬇️

scientific article

Identifying and exploiting the anatomical origin of population rate oscillations in multi-layered spiking networks

scientific article published on 4 December 2015

Influence of different types of downscaling on a cortical microcircuit model.

scientific article published on 8 July 2013

Instantaneous non-linear processing by pulse-coupled threshold units

scientific article

Integrating multi-scale data for a network model of macaque visual cortex

scientific article published on 8 July 2013

Integration of Continuous-Time Dynamics in a Spiking Neural Network Simulator.

scientific article

Interactive visualization of brain-scale spiking activity

scientific article published on 8 July 2013

Invariance of covariances arises out of noise

article

Is a 4-bit synaptic weight resolution enough? - constraints on enabling spike-timing dependent plasticity in neuromorphic hardware

scientific article published on 17 July 2012

LFP beta amplitude is linked to mesoscopic spatio-temporal phase patterns.

scientific article published on 26 March 2018

Layer dependent neural modulation of a realistic layered-microcircuit model in visual cortex based on bottom-up and top-down signals

scientific article

Layer-Dependent Attentional Processing by Top-down Signals in a Visual Cortical Microcircuit Model

scientific article

Limits to the development of feed-forward structures in large recurrent neuronal networks

scientific article published on 14 February 2011

Limits to the scalability of cortical network models.

scientific article published on 4 December 2015

MEA-Tools: an open source toolbox for the analysis of multi-electrode data with MATLAB.

scientific article

Macaque structural connectivity revisited: CoCoMac 2.0.

scientific article published on 18 July 2011

Meeting the memory challenges of brain-scale network simulation

scientific article published on January 2011

Modeling cortical and thalamocortical mechanisms involved in alpha generation ⬇️

conference paper published in 2019

Modeling the spatial reach of the LFP.

scientific article

Modulated escape from a metastable state driven by colored noise ⬇️

scientific article

Multi-scale account of the network structure of macaque visual cortex

scientific article published on 16 November 2017

Multi-scale, multi-modal neural modeling and simulation

scientific article published on 14 July 2011

Multithreaded and Distributed Simulation of Large Biological Neuronal Networks

NMDA-receptor inhibition increases spine stability of denervated mouse dentate granule cells and accelerates spine density recovery following entorhinal denervation in vitro

scientific article published on 9 August 2013

Neurons hear their echo

Noise suppression and surplus synchrony by coincidence detection.

scientific article

Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons

scientific article published in January 2017

Performance Comparison of the Digital Neuromorphic Hardware SpiNNaker and the Neural Network Simulation Software NEST for a Full-Scale Cortical Microcircuit Model.

scientific article published on 23 May 2018

Phase locking between excess spike synchrony and LFP is independent of rate covariation.

scientific article published on 20 July 2010

Phenomenological models of synaptic plasticity based on spike timing

scientific article published on 20 May 2008

Programmable logic construction kits for hyper-real-time neuronal modeling

scientific article

Propagation of synchronous spiking activity in feedforward neural networks

scientific article published on January 1996

PyNEST: A Convenient Interface to the NEST Simulator

scientific article published in January 2008

Python in neuroscience

scientific article

Random wiring limits the development of functional structure in large recurrent neuronal networks

scholarly article by Susanne Kunkel et al published 20 July 2010 in BMC Neuroscience

Reaction-diffusion-like formalism for plastic neural networks reveals dissipative solitons at criticality ⬇️

scientific article published on 6 June 2016

Reconstructing neuronal circuitry from parallel spike trains

scientific article published on 02 October 2019

Recurrence and external sources differentially shape network correlations

scientific article published on 8 July 2013

Relating excess spike synchrony to LFP-locked firing rates modulations.

scientific article published on 8 July 2013

Robustness vs. flexibility: how do external inputs shape the activity in a data-based layered cortical network model?

scientific article

Run-time interoperability between neuronal network simulators based on the MUSIC framework

scientific article

Scalability of Asynchronous Networks Is Limited by One-to-One Mapping between Effective Connectivity and Correlations ⬇️

scientific article published on September 2015

Second type of criticality in the brain uncovers rich multiple-neuron dynamics

scientific article published on 12 June 2019

Selecting appropriate surrogate methods for spike correlation analysis

Sequence learning, prediction, and replay in networks of spiking neurons

scientific article published on 21 June 2022

Simplicity and efficiency of integrate-and-fire neuron models

scientific article published in February 2009

Simulation of networks of spiking neurons: a review of tools and strategies

scientific article

Spatial and feature-based attention in a layered cortical microcircuit model

scientific article

Spike-timing dependence of structural plasticity explains cooperative synapse formation in the neocortex

scientific article

Spike-timing-dependent plasticity in balanced random networks

scientific article

Spiking network simulation code for petascale computers

scientific article

Structural plasticity controlled by calcium based correlation detection. helias@bccn.uni-freiburg.de

scientific article published on 24 December 2008

Supercomputers ready for use as discovery machines for neuroscience

scientific article published on 2 November 2012

Surrogate spike train generation through dithering in operational time

scientific article published on 22 September 2010

Taming the model zoo: a unified view on correlations in recurrent networks

scientific article

The Scientific Case for Brain Simulations

scientific article published on 01 May 2019

The cell-type specific cortical microcircuit: relating structure and activity in a full-scale spiking network model

scientific article published on 2 December 2012

The correlation structure of local neuronal networks intrinsically results from recurrent dynamics

scientific article published on 16 January 2014

The local field potential reflects surplus spike synchrony

scientific article published on 20 April 2011

The transfer function of the LIF model: from white to filtered noise.

scientific article published on 21 July 2014

Towards a unified theory of correlations in recurrent neural networks

scientific article

Towards guiding principles in workflow design to facilitate collaborative projects involving massively parallel electrophysiological data

scientific article

Towards the visualization of spiking neurons in virtual reality

scientific article published on January 1, 2011

Unitary Events in Multiple Single-Neuron Spiking Activity: I. Detection and Significance

article by Sonja Grün et al published January 2002 in Neural Computation

Unitary events in multiple single-neuron spiking activity: II. Nonstationary data

scientific article

VIOLA-A Multi-Purpose and Web-Based Visualization Tool for Neuronal-Network Simulation Output

scholarly article by Johanna Senk et al published 2018 in Frontiers in Neuroinformatics

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