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List of works by François Serra

3D modeling of chromatin structure: is there a way to integrate and reconcile single cell and population experimental data?

Analysis of Five Gene Sets in Chimpanzees Suggests Decoupling between the Action of Selection on Protein-Coding and on Noncoding Elements

scientific article

Assessing the limits of restraint-based 3D modeling of genomes and genomic domains

scientific article

Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors

scientific article published on 19 July 2017

Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation

scientific article published on October 2014

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

scientific article

Evolution of the biosynthesis of di-myo-inositol phosphate, a marker of adaptation to hot marine environments

scientific article published on 26 October 2011

Evolutionary Genomics of Genes Involved in Olfactory Behavior in the Drosophila melanogaster Species Group

scientific article published on 9 January 2012

Natural selection on functional modules, a genome-wide analysis

scientific article

Neutral theory predicts the relative abundance and diversity of genetic elements in a broad array of eukaryotic genomes

scientific article

Parallel sequencing lives, or what makes large sequencing projects successful

scientific article published on 18 October 2017

Parallel sequencing lives, or what makes large sequencing projects successful

Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing

scientific article

Positive selection in nucleoporins challenges constraints on early expressed genes in Drosophila development

scientific article published on January 2013

Recent human evolution has shaped geographical differences in susceptibility to disease

scientific article

Restraint-based three-dimensional modeling of genomes and genomic domains

scientific article

Role of tomato BRANCHED1-like genes in the control of shoot branching.

scientific article

STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal transcriptional program of bladder cancer cells

scientific article published on 01 November 2021

Selective constraints on protamine 2 in primates and rodents

scientific article published on 22 January 2016

Structural features of the fly chromatin colors revealed by automatic three-dimensional modeling

scholarly article published 15 January 2016

The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia

scientific article published on 21 May 2018

Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming

scientific article published on 15 January 2018

Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs

scientific article published on 22 May 2020

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