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List of works by Ralf Steuer

A Comprehensively Curated Genome-Scale Two-Cell Model for the Heterocystous Cyanobacterium Anabaena sp. PCC 7120.

scientific article published on 29 November 2016

A computational analysis of stoichiometric constraints and trade-offs in cyanobacterial biofuel production.

scientific article published on 20 April 2015

A gentle guide to the analysis of metabolomic data

scientific article

A model of optimal protein allocation during phototrophic growth.

scientific article published on 21 February 2018

A probabilistic approach to identify putative drug targets in biochemical networks

scientific article published on December 2010

A quantitative evaluation of ethylene production in the recombinant cyanobacterium Synechocystis sp. PCC 6803 harboring the ethylene-forming enzyme by membrane inlet mass spectrometry

scientific article

Activity and functional properties of the isocitrate lyase in the cyanobacterium Cyanothece sp. PCC 7424.

scientific article

An algorithm for the reduction of genome-scale metabolic network models to meaningful core models.

scientific article published on 19 August 2015

Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth.

scientific article

Computational approaches to the topology, stability and dynamics of metabolic networks.

scientific article published on 14 June 2007

Constructive effects of fluctuations in genetic and biochemical regulatory systems.

scientific article published in December 2003

Cyanobacterial biofuels: new insights and strain design strategies revealed by computational modeling

scientific article

Effects of stochasticity in models of the cell cycle: from quantized cycle times to noise-induced oscillations

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Elucidating temporal resource allocation and diurnal dynamics in phototrophic metabolism using conditional FBA.

scientific article published on 26 October 2015

Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution

scientific article published on 15 January 2014

Enzyme allocation problems in kinetic metabolic networks: optimal solutions are elementary flux modes

scientific article published in December 2013

Estimating mutual information using B-spline functions--an improved similarity measure for analysing gene expression data

scientific article

Feedback, Mass Conservation and Reaction Kinetics Impact the Robustness of Cellular Oscillations

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Flux balance analysis of cyanobacterial metabolism: the metabolic network of Synechocystis sp. PCC 6803.

scientific article

From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle

scientific article published on 7 March 2007

How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis.

scientific article

Identification of the light-independent phosphoserine pathway as an additional source of serine in the cyanobacterium Synechocystis sp. PCC 6803.

scientific article published on 20 February 2015

Kinetic modeling of the Calvin cycle identifies flux control and stable metabolomes in Synechocystis carbon fixation

scientific article published on 01 February 2019

Metabolomic networks in plants: Transitions from pattern recognition to biological interpretation.

scientific article published on 21 November 2005

Modelling microbial communities using biochemical resource allocation analysis

scientific article published on 06 November 2019

Modules of co-occurrence in the cyanobacterial pan-genome reveal functional associations between groups of ortholog genes.

scientific article published on 9 March 2018

Monte-Carlo modeling of the central carbon metabolism of Lactococcus lactis: insights into metabolic regulation

scientific article

Observing and interpreting correlations in metabolomic networks

scientific article published in May 2003

Optimal proteome allocation strategies for phototrophic growth in a light-limited chemostat

scientific article published on 10 October 2019

Optimizing cyanobacterial product synthesis: Meeting the challenges.

scientific article published on 15 July 2016

Physiological tolerance and stoichiometric potential of cyanobacteria for hydrocarbon fuel production

scientific article published on 29 August 2012

Quantitative insights into the cyanobacterial cell economy

scientific article published on 04 February 2019

Resource allocation in metabolic networks: kinetic optimization and approximations by FBA.

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Robust signal processing in living cells

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SulfoSYS (Sulfolobus Systems Biology): towards a silicon cell model for the central carbohydrate metabolism of the archaeon Sulfolobus solfataricus under temperature variation.

scientific article published in February 2009

The Circadian Clock Regulates Metabolic Phenotype Rewiring Via HKDC1 and Modulates Tumor Progression and Drug Response in Colorectal Cancer

scientific article published on 10 July 2018

The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms

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The metabolic network of Synechocystis sp. PCC 6803: systemic properties of autotrophic growth

scientific article published on 8 July 2010

The mutual information: detecting and evaluating dependencies between variables.

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The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks

scientific article published on 13 November 2007

Toward Multiscale Models of Cyanobacterial Growth: A Modular Approach.

scientific article published on 26 December 2016

Validation and functional annotation of expression-based clusters based on gene ontology

scientific article