List of works by Kieran Alden

ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behaviour.

scientific article

Agent-Based Modeling in Systems Pharmacology

scientific article

Automated multi-objective calibration of biological agent-based simulations.

scientific article published on September 2016

Building confidence in quantitative systems pharmacology models: An engineer's guide to exploring the rationale in model design and development

scientific article

Computing: Scientific software needs quality control

scientific article published in October 2013

Differential RET signaling pathways drive development of the enteric lymphoid and nervous systems

scientific article

Extending and Applying Spartan to Perform Temporal Sensitivity Analyses for Predicting Changes in Influential Biological Pathways in Computational Models.

scientific article published on 11 February 2016

Model-Driven Experimentation: A New Approach to Understand Mechanisms of Tertiary Lymphoid Tissue Formation, Function, and Therapeutic Resolution.

scientific article published on January 2016

Pairing experimentation and computational modeling to understand the role of tissue inducer cells in the development of lymphoid organs.

scientific article published on 18 July 2012

Simulation and statistical techniques to explore lymphoid tissue organogenesis

doctoral thesis

Spartan: a comprehensive tool for understanding uncertainty in simulations of biological systems

scientific article

Using argument notation to engineer biological simulations with increased confidence.

scientific article published on March 2015

Utilising a simulation platform to understand the effect of domain model assumptions

scientific article published on January 2015

dConsensus: a tool for displaying domain assignments by multiple structure-based algorithms and for construction of a consensus assignment

scientific article (publication date: 9 June 2010)