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List of works by Jacques Fellay

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Counteraction of HLA-C-mediated immune control of HIV-1 by Nef.

scientific article
The Duffy antigen receptor for chemokines null promoter variant does not influence HIV-1 acquisition or disease progression

scientific article
Disentangling human tolerance and resistance against HIV.

scientific article
The association of genetic variants with hepatic steatosis in patients with genotype 1 chronic hepatitis C infection

scientific article
Adverse events to antiretrovirals in the Swiss HIV Cohort Study: effect on mortality and treatment modification

article
Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines

article
Amino Acid Variation in HLA Class II Proteins Is a Major Determinant of Humoral Response to Common Viruses

scientific article
Analysis of stop-gain and frameshift variants in human innate immunity genes

scientific article
Host genetics influences on HIV type-1 disease

scientific article
Hepatitis C trials that combine investigational agents with pegylated interferon should be stratified by interleukin-28B genotype

scientific article published on 30 June 2010
Identification of Siglec-1 null individuals infected with HIV-1.

scientific article published on 11 August 2016
COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation

scientific article published on 19 March 2020
HIV-1 Vpu is a potent transcriptional suppressor of NF-κB-elicited antiviral immune responses

article
Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe

scientific article
Impact of phenotype definition on genome-wide association signals: empirical evaluation in human immunodeficiency virus type 1 infection

scientific article published on 13 April 2011
Pharmacogenomics of HIV Therapy: Summary of a Workshop Sponsored by the National Institute of Allergy and Infectious Diseases

scientific article published on September 1, 2011
The Interplay Between Host Genetic Variation, Viral Replication, and Microbial Translocation in Untreated HIV-Infected Individuals

scientific article published on February 20, 2015
CYP3A activity measured by the midazolam test is not related to 3435 C >T polymorphism in the multiple drug resistance transporter gene

scientific article published in April 2004
The Characteristics of Heterozygous Protein Truncating Variants in the Human Genome

scientific article published on 7 December 2015
Role of APOBEC3F Gene Variation in HIV-1 Disease Progression and Pneumocystis Pneumonia

scientific article
Privacy-preserving genomic testing in the clinic: a model using HIV treatment.

scientific article published on 14 January 2016
Killer cell immunoglobulin-like receptor 3DL1 variation modifies HLA-B*57 protection against HIV-1.

scientific article published on 20 February 2018
HLA class I and KIR genes do not protect against HIV type 1 infection in highly exposed uninfected individuals with hemophilia A.

scientific article
Exome Sequencing Reveals Primary Immunodeficiencies in Children with Community-Acquired Pseudomonas aeruginosa Sepsis

scientific article published on 20 September 2016
Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART

scientific article published on 19 July 2019
A polymorphism in the HCP5 gene associated with HLA-B*5701 does not restrict HIV-1 in vitro

scientific article published on January 2010
Estimating the Respective Contributions of Human and Viral Genetic Variation to HIV Control

scientific article
Evaluating the impact of functional genetic variation on HIV-1 control

scientific article published on 9 September 2017
Human genetic variation in HIV disease: beyond genome-wide association studies

scientific article
Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver.

scientific article published in January 2018
A novel Acute Retroviral Syndrome Severity Score predicts the key surrogate markers for HIV-1 disease progression

scientific article
GuavaH: a compendium of host genomic data in HIV biology and disease

scientific article
Detection of novel astroviruses MLB1 and MLB2 in the sera of febrile Tanzanian children.

scientific article published on 14 March 2018
Blacklisting variants common in private cohorts but not in public databases optimizes human exome analysis

scientific article published on 27 December 2018
HLA-B*14:02-Restricted Env-Specific CD8+ T-Cell Activity Has Highly Potent Antiviral Efficacy Associated with Immune Control of HIV Infection

scientific article published on 6 September 2017
A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals

scientific article published on 13 September 2019
Gender medicine and oncology: report and consensus of an ESMO workshop

scientific article published on 01 December 2019
Differential Immunodominance Hierarchy of CD8+ T-Cell Responses in HLA-B*27:05- and -B*27:02-Mediated Control of HIV-1 Infection

scientific article published on 22 November 2017
Role of human leukocyte antigen class I alleles in progressive multifocal leukoencephalopathy

scientific article
Treatment of Cytomegalovirus Infection or Disease in Solid Organ Transplant Recipients with Valganciclovir

Neonatal Group B Streptococcal Disease in Otherwise Healthy Infants: Failure of Specific Neonatal Immune Responses

scientific article published on 07 March 2017
A privacy-preserving solution for compressed storage and selective retrieval of genomic data

scientific article
GenoGuard: Protecting Genomic Data against Brute-Force Attacks

P08-06 LB. A genome-wide association study of host genetic determinants of T cell responses to the MRKAd5 HIV-1 gag/pol/nef vaccine in the STEP trial

scientific article published on 22 October 2009
Adaptation on a genomic scale.

scientific article published on 3 February 2015
Publisher Correction: Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors

scientific article published on 01 June 2018
HLA-Bw4 identifies a population of HIV-infected patients with an increased capacity to control viral replication after structured treatment interruption

scientific article published on 15 April 2012
HIV and solid organ transplantation: the Swiss experience

article
Human genomics of acute liver failure due to hepatitis B virus infection: an exome sequencing study in liver transplant recipients

scientific article published on 06 November 2018
Correcting for Population Stratification Reduces False Positive and False Negative Results in Joint Analyses of Host and Pathogen Genomes

scholarly article by Olivier Naret et al published 2018 in Frontiers in Genetics

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