List of works by Erik De Schutter

25th Annual Computational Neuroscience Meeting: CNS-2016

scientific article

A Model of Induction of Cerebellar Long-Term Depression Including RKIP Inactivation of Raf and MEK.

scientific article published on 6 February 2017

A NineML-based domain-specific language for computational exploration of connectivity in the cerebellar granular layer.

scientific article published on 21 July 2014

A biophysical model of cerebellar molecular layer interneuron

scientific article published on 8 July 2013

A computational study of stochastic mechanisms in dendritic calcium spike generation

scientific article

A computational study on the spatial correlation of granule cell firing in the cerebellar cortex

scientific article

A higher order motion region in human inferior parietal lobule: evidence from fMRI.

scientific article

A novel high channel-count system for acute multisite neuronal recordings

scientific article published in August 2006

A patchy horizontal organization of the somatosensory activation of the rat cerebellum demonstrated by functional MRI.

scientific article published in August 1999

A second look back

article by Erik De Schutter published March 2007 in Neuroinformatics

A stochastic signaling network mediates the probabilistic induction of cerebellar long-term depression

scientific article published in July 2012

ATP consumption in molecular reactions of neuronal signaling

scientific article published on 21 July 2014

ATP consumption in molecular signaling of CA1 Hippocampus neurons

scientific article published on 4 December 2015

Accurate reaction-diffusion operator splitting on tetrahedral meshes for parallel stochastic molecular simulations.

scientific article published in August 2016

Activity-homeostasis preserves synaptic plasticity in Purkinje cell but calcium is not the activity-sensor.

scientific article published on 6 July 2007

Alcohol excites cerebellar Golgi cells by inhibiting the Na+/K+ ATPase

scientific article

Alternative equations for the molluscan ion currents described by Connor and Stevens

scientific article

An information science infrastructure for neuroscience

scientific article

Anomalous diffusion in Purkinje cell dendrites caused by spines

scientific article published on November 2006

Author Correction: The choroid plexus is an important circadian clock component

scientific article published on 20 November 2019

Biophysically detailed modelling of microcircuits and beyond

scientific article

Boundary representation of neural architecture and connectivity

scientific article

Ca Requirements for Long-Term Depression Are Frequency Sensitive in Purkinje Cells

scholarly article by C G Zamora Chimal published in January 2018

Calcium, synaptic plasticity and intrinsic homeostasis in purkinje neuron models

scientific article published on 19 December 2008

Cerebellar Golgi cells in the rat: receptive fields and timing of responses to facial stimulation

scientific article published in August 1999

Cerebellar LTD and pattern recognition by Purkinje cells

scientific article published in April 2007

Cerebellar Nuclear Neurons Use Time and Rate Coding to Transmit Purkinje Neuron Pauses

scientific article published on 2 December 2015

Cerebellar cortex: computation by extrasynaptic inhibition?

scientific article

Cerebellar long-term depression might normalize excitation of Purkinje cells: a hypothesis.

scientific article

Cerebrospinal Fluid Proteins in Neurology1

scientific article published on January 1, 1984

Challenges of declarative modeling of conductance-based neurons in diverse simulation environments

scientific article published on 8 July 2013

Collaborative modeling in neuroscience: time to go open model?

scientific article published on 01 April 2013

Color discrimination involves ventral and dorsal stream visual areas

scientific article published on 28 March 2004

Comparing BOLD fMRI signal changes in the awake and anesthetized rat during electrical forepaw stimulation.

scientific article published in July 2001

Compensating the effect of dendritic diameters on calcium transients: a modeling study

scientific article

Complex parameter landscape for a complex neuron model

scientific article

Computational Neuroscience Ontology: a new tool to provide semantic meaning to your models.

scientific article

Computational reconstruction of pacemaking and intrinsic electroresponsiveness in cerebellar Golgi cells

scientific article published on 30 December 2007

Computer software for development and simulation of compartmental models of neurons

scientific article

Context-aware modeling of neuronal morphologies

scientific article published on 5 September 2014

Controlling Ca2+-activated K+ channels with models of Ca2+ buffering in Purkinje cells

scientific article published on September 2012

Corrigendum: Non-linear leak currents affect mammalian neuron physiology

scientific article published on 10 December 2015

Current source density correlates of cerebellar Golgi and Purkinje cell responses to tactile input.

scientific article

Data Publishing and Scientific Journals: The Future of the Scientific Paper in a World of Shared Data ⬇️

scientific article published on October 1, 2010

Deep Learning and Computational Neuroscience

scientific article published on 20 January 2018

Deletion of FMR1 in Purkinje cells enhances parallel fiber LTD, enlarges spines, and attenuates cerebellar eyelid conditioning in Fragile X syndrome

scientific journal article

Dendritic amplification of inhibitory postsynaptic potentials in a model Purkinje cell

scientific article

Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models.

scientific article published on 23 July 2014

Design and implementation of multi-signal and time-varying neural reconstructions ⬇️

scientific article

Determinants of synaptic integration and heterogeneity in rebound firing explored with data-driven models of deep cerebellar nucleus cells

scientific article

Disentangling perceptual from motor implicit sequence learning with a serial color-matching task

scientific article

Draculab: A Python Simulator for Firing Rate Neural Networks With Delayed Adaptive Connections

Duration of Purkinje cell complex spikes increases with their firing frequency

scientific article

Dynamic synchronization of Purkinje cell simple spikes

scientific article published on 20 September 2006

Effects of variability in anatomical reconstruction techniques on models of synaptic integration by dendrites: a comparison of three Internet archives

scientific article

Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS.

scientific article published on 29 October 2013

Efficient estimation of phase response curves via compressive sensing.

scientific article published on 18 July 2011

Efficient estimation of phase-response curves via compressive sensing

scientific article

Excitation of rat cerebellar Golgi cells by ethanol: further characterization of the mechanism.

scientific article

Exploring the functional implications of brain architecture and connectivity: a declarative language framework

scientific article

Exploring the functional implications of brain architecture and connectivity: a multi-simulator framework for biophysical neuronal models

scientific article

Exploring the limitations of simulator independence via an implementation of a biophysically detailed cerebellar cortex model in NEURON and NEST.

scientific article published on 8 July 2013

Fallacies of Mice Experiments

scientific article published on 01 April 2019

Fast-reset of pacemaking and theta-frequency resonance patterns in cerebellar golgi cells: simulations of their impact in vivo

scientific article published on 30 December 2007

Firing rate-dependent phase responses of Purkinje cells support transient oscillations

scientific article published on 08 September 2020

Functional magnetic resonance imaging of the rat cerebellum during electrical stimulation of the fore- and hindpaw at 7 T

GABA-mediated repulsive coupling between circadian clock neurons in the SCN encodes seasonal time

scientific article published on 30 June 2015

Generating dendritic Ca2+ spikes with different models of Ca2+ buffering in cerebellar Purkinje cells.

scientific article published on 20 July 2010

Geometric theory predicts bifurcations in minimal wiring cost trees in biology are flat

scientific article

Identification of several forms of the glial fibrillary acidic protein, or alpha-albumin, by a specific monoclonal antibody

scientific article published in October 1984

Impact of neuronal properties on network coding: roles of spike initiation dynamics and robust synchrony transfer

scientific article published on June 2013

Improving Data Caching of the STochastic Engine for Pathway Simulation (STEPS).

scientific article

Initial state of single spines affects probability of induction of cerebellar long term depression in a stochastic model.

scientific article published on 8 July 2013

Interoperability of neuroscience modeling software: current status and future directions

scientific article published on January 2007

Involvement of multiple functionally distinct cerebellar regions in visual discrimination: a human functional imaging study

scientific article published in October 2003

Kv3.3b expression defines the shape of the complex spike in the Purkinje cell

scientific article published on 13 November 2013

Localization of 5-HT2A, 5-HT3, 5-HT5A and 5-HT7 receptor-like immunoreactivity in the rat cerebellum

scientific article (publication date: June 2002)

Long-term depression and recognition of parallel fibre patterns in a multi-compartmental model of a cerebellar Purkinje cell

article published in 2001

Long-term depression at parallel fiber to Golgi cell synapses

scientific article published on 22 September 2010

Mechanism of spontaneous and self-sustained oscillations in networks connected through axo-axonal gap junctions

scientific article published on 01 June 2007

Microcircuits in action--from CPGs to neocortex

scientific article

Microscopic cues shape neuronal morphology and microcircuits

scientific article published on 21 July 2014

Miniature carrier with six independently moveable electrodes for recording of multiple single-units in the cerebellar cortex of awake rats.

scientific article published in December 1999

Modeling the leech heartbeat elemental oscillator. I. Interactions of intrinsic and synaptic currents

scientific article published on 01 September 1995

Modulatory effects of parallel fiber and molecular layer interneuron synaptic activity on purkinje cell responses to ascending segment input: a modeling study.

scientific article published in November 2002

Morphological and neurochemical differentiation of large granular layer interneurons in the adult rat cerebellum

scientific article

Motor-pattern-generating networks in invertebrates: modeling our way toward understanding

scientific article published on November 1, 1992

Na+/K+-ATPase inhibition partially mimics the ethanol-induced increase of the Golgi cell-dependent component of the tonic GABAergic current in rat cerebellar granule cells

scientific article

Neurofitter: a parameter tuning package for a wide range of electrophysiological neuron models

scientific article published on 2 November 2007

Neuroinformatics for Degenerate Brains

scientific article published on 19 December 2015

Neuroinformatics: the integration of shared databases and tools towards integrative neuroscience

scientific article published on December 2002

Neuroscience data and tool sharing: a legal and policy framework for neuroinformatics

scientific article

Neuroscience leading the way: reviews cascade by the INCF

scientific article published on 01 January 2007

NineML: the network interchange for neuroscience modeling language

scientific article

Non-linear leak currents affect mammalian neuron physiology

scientific article

On the firing rate dependency of the phase response curve of rat Purkinje neurons in vitro.

scientific article

On the future of the human brain project

scientific article published in January 2006

Oscillations in the cerebellar cortex: a prediction of their frequency bands.

scientific article

Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers.

scientific article published on 10 February 2017

Passive models of neurons in the deep cerebellar nuclei: the effect of reconstruction errors

Patterns and pauses in Purkinje cell simple spike trains: experiments, modeling and theory.

scientific article published on 26 February 2009

Patterns in network activity and information processing in a detailed computer model of the cerebellar granular layer.

scientific article published on 21 July 2014

Period coding of Bmal1 oscillators in the suprachiasmatic nucleus.

scientific article

Peripheral stimuli excite coronal beams of Golgi cells in rat cerebellar cortex.

scientific article

Purkinje cells: the forest shapes the trees

scientific article published on 4 December 2015

Purkinje neurons: What is the signal for complex spikes?

scientific article published in October 2008

Python-based geometry preparation and simulation visualization toolkits for STEPS.

scientific article

Rank order decoding of temporal parallel fibre input patterns in a complex Purkinje cell model

Rat somatosensory cerebropontocerebellar pathways: spatial relationships of the somatotopic map of the primary somatosensory cortex are preserved in a three-dimensional clustered pontine map

scientific article published on 01 June 2000

Reduction of multi-compartmental biophysical models by incremental, automated retuning of their parameters and synaptic weights

scientific article published on 21 July 2014

Regular patterns in cerebellar Purkinje cell simple spike trains

scientific article published on 30 May 2007

Review of papers describing neuroinformatics software

scientific article published on December 2009

Robustness effect of gap junctions between Golgi cells on cerebellar cortex oscillations

scientific article

STEPS: Modeling and Simulating Complex Reaction-Diffusion Systems with Python

scientific article

STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies

scientific article

Single neuron firing properties impact correlation-based population coding.

scientific article published on January 2012

Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer

scientific article published on 21 September 2017

Stochastic calcium mechanisms cause dendritic calcium spike variability

scientific article published in October 2013

Stochastic description of complex and simple spike firing in cerebellar Purkinje cells

scientific article

Switching On Depression and Potentiation in the Cerebellum.

scientific article published in January 2018

Temporal characteristics of tactile stimuli influence the response profile of cerebellar Golgi cells

scientific article

Ten years of neuroinformatics

scientific article published in October 2012

The International Neuroinformatics Coordinating Facility: evaluating the first years

scientific article published on 28 July 2009

The RAT-ROTADRUM: a reaction time task depending on a continuous stream of tactile sensory information to the rat.

scientific article published on 7 July 2011

The choroid plexus is an important circadian clock component.

scientific article published on 14 March 2018

The dangers of plug-and-play simulation using shared models

scientific article published on 01 April 2014

The diffusional properties of dendrites depend on the density of dendritic spines ⬇️

scientific article published on 19 July 2011

The effect of NMDA receptors on gain modulation.

scientific article

The effect of glutamate-gated chloride current on the excitability of a Purkinje cell: a modeling study

scientific article

The effect of synchronized pauses on the coding strategies of cerebellar nuclear neurons: a modeling study

scientific article published on 18 December 2015

The importance of stochastic signaling processes in the induction of long-term synaptic plasticity

scientific article published on 7 December 2012

The ionic mechanism of the Purkinje cell dendritic spikes generation and propagation: a model exploration

scientific article published on 4 December 2015

The layer-oriented approach to declarative languages for biological modeling

scientific article

The missing piece of the puzzle: neuroinformatics at the bench

scientific article published on 01 April 2015

The mysterious microcircuitry of the cerebellar nuclei

scientific article published on 26 April 2011

The promise and shortcomings of XML as an interchange format for computational models of biology

scientific article published on 01 January 2012

The role of dendritic spine morphology in the compartmentalization and delivery of surface receptors

scientific article published on 10 October 2013

Time to Bring Single Neuron Modeling into 3D.

scientific article published on 5 January 2017

Topographical organization of pathways from somatosensory cortex through the pontine nuclei to tactile regions of the rat cerebellar hemispheres.

scientific article published in November 2006

Unraveling the cerebellar cortex: cytology and cellular physiology of large-sized interneurons in the granular layer

scientific article published on January 2003

Variability and directionality of inferior olive neuron dendrites revealed by detailed 3D characterization of an extensive morphological library

scientific article published on 30 March 2019

Voltage- and Branch-Specific Climbing Fiber Responses in Purkinje Cells

scientific article published on 01 August 2018

Weak common parallel fibre synapses explain the loose synchrony observed between rat cerebellar golgi cells.

scientific article published in February 2000

Why are computational neuroscience and systems biology so separate?

scientific article (publication date: 30 May 2008)

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