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List of works by Kazuki Saito

(+)-13.BETA.-Hydroxymamanine, a new lupin alkaloid from Maackia amurensis var. buergeri. ⬇️

12-oxo-phytodienoic acid-glutathione conjugate is transported into the vacuole in Arabidopsis.

scientific article

2-Hydroxyisoflavanone dehydratase is a critical determinant of isoflavone productivity in hairy root cultures of Lotus japonicus

scientific article published on 4 October 2007

A 1H-NMR study of the solution conformation of Icaria chemotactic peptide and its [Lys7] analog: effects on the physiological activity of a substitution of proline to lysine at position 7

scientific article published on 01 April 1990

A Dioxygenase Catalyzes Steroid 16α-Hydroxylation in Steroidal Glycoalkaloid Biosynthesis.

scientific article published on 28 July 2017

A Highly Specific Genome-Wide Association Study Integrated with Transcriptome Data Reveals the Contribution of Copy Number Variations to Specialized Metabolites in Arabidopsis thaliana Accessions

scientific article

A New Lupine Alkaloid, (-)-Δ5S-Dehydromultiflorine, from the Seeds of Lupinus termis

article published in 2005

A Systems Analysis With "Simplified Source-Sink Model" Reveals Metabolic Reprogramming in a Pair of Source-to-Sink Organs During Early Fruit Development in Tomato by LED Light Treatments

article

A WD-repeat-containing putative regulatory protein in anthocyanin biosynthesis in Perilla frutescens

scientific article published in October 2002

A cellulose synthase-derived enzyme catalyses 3-O-glucuronosylation in saponin biosynthesis

scientific article published on 16 November 2020

A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms

scientific article published on 28 March 2019

A chloroplastic UDP-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis

scientific article published on 13 March 2009

A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling

scientific article

A conserved strategy of chalcone isomerase-like protein to rectify promiscuous chalcone synthase specificity

scientific article published on 13 February 2020

A flavonoid 3-O-glucoside:2"-O-glucosyltransferase responsible for terminal modification of pollen-specific flavonols in Arabidopsis thaliana

scientific article

A gamma-glutamyl transpeptidase-independent pathway of glutathione catabolism to glutamate via 5-oxoproline in Arabidopsis

scientific article

A glycosidic lupin alkaloid from Lupinus hirsutus

scientific article published on 25 July 2002

A lipidome atlas in MS-DIAL 4

scientific article published on 15 June 2020

A new class of plant lipid is essential for protection against phosphorus depletion

scientific article published on January 2013

A new member of plant CS-lyases. A cystine lyase from Arabidopsis thaliana

scientific article published on 13 January 2003

A novel role for methyl cysteinate, a cysteine derivative, in cesium accumulation in Arabidopsis thaliana

scientific article

A polyhedral approach for understanding flavonoid biosynthesis in Arabidopsis

scientific article published on 21 March 2010

A proposed framework for the description of plant metabolomics experiments and their results

article

A stress-inducible sulphotransferase sulphonates salicylic acid and confers pathogen resistance in Arabidopsis

scientific article published in April 2010

A structure-based strategy for discovery of small ligands binding to functionally unknown proteins: combination of in silico screening and surface plasmon resonance measurements

scientific article

A survival strategy: the coevolution of the camptothecin biosynthetic pathway and self-resistance mechanism

scientific article published on 24 August 2009

A wasp venom mastoparan-induced polyphosphoinositide breakdown in rat peritoneal mast cells

scientific article published on 01 September 1985

ACR11 is an Activator of Plastid-Type Glutamine Synthetase GS2 in Arabidopsis thaliana

scientific article published on 6 March 2017

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis

scientific article published on 27 November 2006

Absolute configuration of (+)-5,6-dehydrolupanine, a key intermediate in biosynthesis of lupin alkaloids

Absolute configuration of (-)-lusitanine, a new lupin alkaloid in Maackia species. ⬇️

Acceleration of Mechanistic Investigation of Plant Secondary Metabolism Based on Computational Chemistry

scientific article published on 26 June 2019

Acetate-mediated novel survival strategy against drought in plants.

scientific article published on 26 June 2017

Acyltransferases for lupin alkaloids in Lupinus hirsutus

scientific article published on 25 July 2002

Adaptation of the symbiotic Mesorhizobium-chickpea relationship to phosphate deficiency relies on reprogramming of whole-plant metabolism.

scientific article published on 22 July 2016

Allylic Hydroxylation Activity Is a Source of Saponin Chemodiversity in the Genus <i>Glycyrrhiza</i>

scientific article published in 2021

Alternation of flavonoid accumulation under drought stress in Arabidopsis thaliana

scientific article published on 13 June 2014

Alternative translational initiation of ATP sulfurylase underlying dual localization of sulfate assimilation pathways in plastids and cytosol in Arabidopsis thaliana

scientific article

An MYB transcription factor regulating specialized metabolisms in Ophiorrhiza pumila

article published in 2016

An acyltransferase-like gene obtained by differential gene expression profiles of quinolizidine alkaloid-producing and nonproducing cultivars of Lupinus angustifolius

article

An improved tolerance to cadmium by overexpression of two genes for cysteine synthesis in tobacco

article

Analysis of lupine alkaloids in plants by high-performance liquid chromatography

scientific article published on 25 July 2002

Analysis of systemic sulfur metabolism in plants using integrated ‘-omics’ strategies

article

Ancient rice cultivar extensively replaces phospholipids with non-phosphorus glycolipid under phosphorus deficiency.

scientific article published on 7 February 2018

Anionic nutrient transport in plants: the molecular basis of the sulfate transporter gene family

scientific article

Application of a metabolomic method combining one-dimensional and two-dimensional gas chromatography-time-of-flight/mass spectrometry to metabolic phenotyping of natural variants in rice

scientific article published on 16 May 2007

Application of gene targeting to designed mutation breeding of high-tryptophan rice

scientific article

Application of plug-plug technique to ACE experiments for discovery of peptides binding to a larger target protein: A model study of calmodulin-binding fragments selected from a digested mixture of reduced BSA

article

Arabidopsis SLIM1 is a central transcriptional regulator of plant sulfur response and metabolism

scientific article published on 17 November 2006

Arabidopsis bile acid:sodium symporter family protein 5 is involved in methionine-derived glucosinolate biosynthesis

scientific article published on 24 July 2009

Assessing metabolomic and chemical diversity of a soybean lineage representing 35 years of breeding

Assessment of metabolome annotation quality: a method for evaluating the false discovery rate of elemental composition searches

scientific article

Association analysis of phenotypic and metabolomic changes in Arabidopsis accessions and their F1 hybrids affected by different photoperiod and sucrose supply

scientific article published on 01 September 2019

AtMetExpress development: a phytochemical atlas of Arabidopsis development ⬇️

article

Author Correction: Pyrophosphate inhibits gluconeogenesis by restricting UDP-glucose formation in vivo

scientific article published on 21 May 2019

Automation of chemical assignment for identifying molecular formula of S-containing metabolites by combining metabolomics and chemoinformatics with 34S labeling

article

BACE1 inhibitors: optimization by replacing the P1' residue with non-acidic moiety

scientific article published on 19 January 2008

Biogenetic implication of lupin alkaloid biosynthesis in bitter and sweet forms of Lupinus luteus and L. albus

article published in 2002

Biosynthesis of camptothecin. In silico and in vivo tracer study from [1-13C]glucose

scientific article

Biosynthesis of riccionidins and marchantins is regulated by R2R3-MYB transcription factors in Marchantia polymorpha

scientific article published on 29 May 2018

Biosynthetic system of camptothecin: An anticancer plant product

article

Boosting Sensitivity in Liquid Chromatography-Fourier Transform Ion Cyclotron Resonance-Tandem Mass Spectrometry for Product Ion Analysis of Monoterpene Indole Alkaloids

scientific article published on 17 December 2015

CYP716A subfamily members are multifunctional oxidases in triterpenoid biosynthesis

scientific article

CYP716A179 functions as a triterpene C-28 oxidase in tissue-cultured stolons of Glycyrrhiza uralensis

scientific article published on 22 December 2016

Camptothecin

article published in 2013

Camptothecin biosynthetic genes in hairy roots of Ophiorrhiza pumila: cloning, characterization and differential expression in tissues and by stress compounds ⬇️

scientific article

Camptothecin production by in vitro cultures and plant regeneration in Ophiorrhiza species.

scientific article

Camptothecin-related alkaloids from hairy roots of Ophiorrhiza pumila

scientific article published on 26 March 2003

Camptothecin: therapeutic potential and biotechnology

scientific article published on August 2007

Camptothecins and Two New Monoterpene Glucosides from Ophiorrhiza liukiuensis.

scientific article published on 3 March 2006

Camptothecins and two new monoterpene glucosides from Ophiorrhiza liukiuensis ⬇️

scientific article

Capillary electrophoresis-mass spectrometry reveals the distribution of carbon metabolites during nitrogen starvation in Synechocystis sp. PCC 6803.

scientific article published on 25 June 2013

Changes in primary and secondary metabolite levels in response to gene targeting-mediated site-directed mutagenesis of the anthranilate synthase gene in rice

scientific article published on 18 December 2012

Changes in trans-S-1-Propenyl-l-cysteine Sulfoxide and Related Sulfur-Containing Amino Acids during Onion Storage

scientific article published on 16 November 2016

Characterization and expression analysis of a serine acetyltransferase gene family involved in a key step of the sulfur assimilation pathway in Arabidopsis

scientific article published on 3 December 2004

Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae

scientific article

Characterization of steroid 5α-reductase involved in α-tomatine biosynthesis in tomatoes

scientific article published on 01 December 2019

Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics

scientific article published on 21 November 2008

Chemical Assignment of Structural Isomers of Sulfur-Containing Metabolites in Garlic by Liquid Chromatography-Fourier Transform Ion Cyclotron Resonance-Mass Spectrometry

scientific article

Chemotactic peptide from ropalidian wasp as well as the authentic chemotactic tripeptide stimulates two distinct pathways in neutrophils, but the [LYS7] analog does only one of them.

scientific article published in February 1991

Chimeric receptor analyses of the interactions of the ectodomains of ErbB-1 with epidermal growth factor and of those of ErbB-4 with neuregulin

scientific article published on 01 May 2002

Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis

scientific article published on 15 January 2021

Cloning and characterization of soybean gene Fg1 encoding flavonol 3-O-glucoside/galactoside (1→6) glucosyltransferase.

scientific article

Combination of liquid chromatography-Fourier transform ion cyclotron resonance-mass spectrometry with 13C-labeling for chemical assignment of sulfur-containing metabolites in onion bulbs

scientific article

Combinatorial Biosynthesis of Legume Natural and Rare Triterpenoids in Engineered Yeast

scientific article published on 31 January 2013

Comparative Characterization of the Leaf Tissue of Physalis alkekengi and Physalis peruviana Using RNA-seq and Metabolite Profiling

scientific article (publication date: 2016)

Comparative genomics and reverse genetics analysis reveal indispensable functions of the serine acetyltransferase gene family in Arabidopsis

scientific article

Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.

scientific article published on 31 March 2010

Comparative transcriptome analyses of three medicinal Forsythia species and prediction of candidate genes involved in secondary metabolisms

article

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data

scientific article

Complete blockage of the mevalonate pathway results in male gametophyte lethality

scientific article published on 10 April 2009

Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis

scientific article published on 29 August 2008

Computational study on a puzzle in the biosynthetic pathway of anthocyanin: Why is an enzymatic oxidation/ reduction process required for a simple tautomerization?

scientific article published on 13 June 2018

Concise machinery for monitoring ubiquitination activities using novel artificial RING fingers

scientific article published on 03 May 2018

Conferring high-temperature tolerance to nontransgenic tomato scions using graft transmission of RNA silencing of the fatty acid desaturase gene

article

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

scientific article from 2010

Constituents of regenerated plants of Ophiorrhiza pumila; formation of a new glycocamptothecin and predominant formation of (3R)-deoxypumiloside over (3S)-congener

scientific article published on 25 July 2002

Convergent evolution in the BAHD family of acyl transferases: identification and characterization of anthocyanin acyl transferases from Arabidopsis thaliana

scientific article published on 8 April 2007

Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis

scientific article published in November 2005

Correlation of camptothecin-producing ability and phylogenetic relationship in the genus Ophiorrhiza

scientific article published on 23 November 2010

Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones

scientific article

Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment

scientific article

Cryopreservation and metabolic profiling analysis of Arabidopsis T87 suspension-cultured cells

scientific article published on September 2008

Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains

scientific article

Cytochrome P450 Monooxygenase CYP716A141 is a Unique b-Amyrin C-16b Oxidase Involved in Triterpenoid Saponin Biosynthesis in Platycodon grandiflorus

scientific article published in June 2017

Cytochrome P450 Monooxygenase CYP716A141 is a Unique β-Amyrin C-16β Oxidase Involved in Triterpenoid Saponin Biosynthesis in Platycodon grandiflorus ⬇️

scientific article published on 23 March 2017

Cytosolic GLUTAMINE SYNTHETASE 1;1 modulates metabolism and chloroplast development in roots

scientific article published on 05 February 2020

De Novo Deep Transcriptome Analysis of Medicinal Plants for Gene Discovery in Biosynthesis of Plant Natural Products

scientific article

De Novo RNA Sequencing and Expression Analysis of Aconitum carmichaelii to Analyze Key Genes Involved in the Biosynthesis of Diterpene Alkaloids

scientific article

De Novo Transcriptome Assembly and Characterization of Lithospermum officinale to Discover Putative Genes Involved in Specialized Metabolites Biosynthesis

scientific article published on 29 May 2018

De novo transcriptome assembly and characterization of nine tissues of Lonicera japonica to identify potential candidate genes involved in chlorogenic acid, luteolosides, and secoiridoid biosynthesis pathways

scientific article published on 14 September 2016

Deciphering Starch Quality of Rice Kernels Using Metabolite Profiling and Pedigree Network Analysis

scientific article published on 15 December 2011

Decoding genes with coexpression networks and metabolomics - 'majority report by precogs'.

scientific article published on 21 December 2007

Deficiency of Starch Synthase IIIa and IVb Alters Starch Granule Morphology from Polyhedral to Spherical in Rice Endosperm.

scientific article published on 8 January 2016

Design of a System for Monitoring Ubiquitination Activities of E2 Enzymes Using Engineered RING Finger Proteins

scientific article published on 01 January 2018

Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes

scientific article

Development of RIKEN Plant Metabolome MetaDatabase

scientific article published on 01 March 2022

Development of a Direct Headspace Collection Method from Arabidopsis Seedlings Using HS-SPME-GC-TOF-MS Analysis

scientific article published on 09 April 2013

Differential gene expression profiles of red and green forms of Perilla frutescens leading to comprehensive identification of anthocyanin biosynthetic genes

scientific article published on 29 May 2008

Direct isolation of flavonoids from plants using ultra-small anatase TiO₂ nanoparticles

scientific article

Discovery and Characterization of the 3-Hydroxyacyl-ACP Dehydratase Component of the Plant Mitochondrial Fatty Acid Synthase System

scientific article published on 15 February 2017

Disruption of adenosine-5'-phosphosulfate kinase in Arabidopsis reduces levels of sulfated secondary metabolites

scientific article published on 20 March 2009

Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis

scientific article published on 10 February 2012

Divergent metabolic adjustments in nodules are indispensable for efficient N2 fixation of soybean under phosphate stress

scientific article published on 03 September 2019

Draft genome assembly and annotation of Glycyrrhiza uralensis, a medicinal legume

scientific article published on 24 October 2016

Dual biosynthetic pathways to phytosterol via cycloartenol and lanosterol in Arabidopsis

scholarly article

Dual-localized enzymatic components constitute the fatty acid synthase systems in mitochondria and plastids

scientific article published on 03 April 2020

Ectopic expression of myo-inositol 3-phosphate synthase induces a wide range of metabolic changes and confers salt tolerance in rice

scientific article published on 18 December 2014

Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana

scientific article published on 28 August 2017

Effects of freeze-drying of samples on metabolite levels in metabolome analyses

scientific article published on 24 August 2011

Effects of molybdenum deficiency and defects in molybdate transporter MOT1 on transcript accumulation and nitrogen/sulphur metabolism in Arabidopsis thaliana

scientific article published on 03 December 2010

Efficient and high-throughput vector construction and Agrobacterium-mediated transformation of Arabidopsis thaliana suspension-cultured cells for functional genomics

scientific article published on 4 January 2008

Efficient genome engineering using Platinum TALEN in potato

scientific article published on 01 September 2019

Elucidation of gene-to-gene and metabolite-to-gene networks in arabidopsis by integration of metabolomics and transcriptomics

scientific article published on 2 May 2005

Enhanced radical scavenging activity of genetically modified Arabidopsis seeds

scientific article published in March 2005

Enhancement of abiotic stress tolerance in poplar by overexpression of key Arabidopsis stress response genes, AtSRK2C and AtGolS2

article

Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids

scientific article

Epigenetic floral homeotic mutation in pD991-AP3-derived T-DNA-tagged lines for CTP:Phosphorylcholine cytidylyltransferase (CCT) Genes: The homeotic mutation of the cct1-1 allele is enhanced by the cct2 allele and alleviated by CCT1 overexpression

article

Erratum: Acetate-mediated novel survival strategy against drought in plants

scientific article published on 17 July 2017

Ethanol-Mediated Novel Survival Strategy against Drought Stress in Plants

scientific article published in 2022

Evaluation of dimerization-inhibitory activities of cyclic peptides containing a β-hairpin loop sequence of the EGF receptor

scientific article published on 17 August 2012

Exploring Matrix Effects and Quantification Performance in Metabolomics Experiments Using Artificial Biological Gradients

scientific article published on 28 June 2011

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics

scientific article

Exploring tomato gene functions based on coexpression modules using graph clustering and differential coexpression approaches

scientific article published on 03 February 2012

Expression and functional analyses of a putative phenylcoumaran benzylic ether reductase in Arabidopsis thaliana.

scientific article published on 25 November 2015

Expression of bacterial tyrosine ammonia-lyase creates a novel p-coumaric acid pathway in the biosynthesis of phenylpropanoids in Arabidopsis

scientific article published on 16 April 2010

Fmoc-based solid phase chemical synthesis of 71-meric neuregulin 1-beta1, an epidermal growth factor-like domain.

scientific article published in March 2008

Fruit setting rewires central metabolism via gibberellin cascades

scientific article published on 03 September 2020

Function of AP2/ERF Transcription Factors Involved in the Regulation of Specialized Metabolism in Ophiorrhiza pumila Revealed by Transcriptomics and Metabolomics

scientific article published on 09 December 2016

Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana

scientific article published on 24 August 2010

Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor

scientific article

Functional genomics for plant natural product biosynthesis

scientific article published on 25 August 2009

Functional specialization of UDP-glycosyltransferase 73P12 in licorice to produce a sweet triterpenoid saponin, glycyrrhizin

scientific article published on 26 June 2019

GC–TOF-MS- and CE–TOF-MS-Based Metabolic Profiling of Cheonggukjang (Fast-Fermented Bean Paste) during Fermentation and Its Correlation with Metabolic Pathways

scientific article published on 18 September 2012

Garlic γ-glutamyl transpeptidases that catalyze deglutamylation of biosynthetic intermediate of alliin

scientific article published in January 2014

Gene-Metabolite Network Analysis Revealed Tissue-Specific Accumulation of Therapeutic Metabolites in Mallotus japonicus

scientific article published in 2021

General regulatory patterns of plant mineral nutrient depletion as revealed by serat quadruple mutants disturbed in cysteine synthesis

scientific article published in March 2010

Generation of α-solanine-free hairy roots of potato by CRISPR/Cas9 mediated genome editing of the St16DOX gene

scientific article published on 24 April 2018

Genetic analysis of L123 of the tRNA-mimicking eukaryote release factor eRF1, an amino acid residue critical for discrimination of stop codons

scientific article published on 20 April 2015

Genetic engineering of group 2 sigma factor SigE widely activates expressions of sugar catabolic genes in Synechocystis species PCC 6803.

scientific article published on 11 July 2011

Global expression profiling of sulfur-starved Arabidopsis by DNA macroarray reveals the role of O-acetyl-l-serine as a general regulator of gene expression in response to sulfur nutrition ⬇️

scientific article published in February 2003

Glycosidic alkaloids from Lupinus hirsutus

scientific article published on 25 July 2002

Glycyrrhiza uralensis transcriptome landscape and study of phytochemicals

scientific article

Greening induced production of (+)-lupanine in tissue culture of Thermopsis lupinoides

scientific article published on 25 July 2002

Heavy metal tolerance of transgenic tobacco plants over-expressing cysteine synthase

scientific article published in January 2004

High-Throughput Sequencing and De Novo Assembly of Red and Green Forms of the Perilla frutescens var. crispa Transcriptome

scientific article

High-throughput cryopreservation of plant cell cultures for functional genomics.

scientific article

High-throughput sequencing and de novo transcriptome assembly of Swertia japonica to identify genes involved in the biosynthesis of therapeutic metabolites

scientific article published on 04 July 2016

Higher dimensional metabolomics using stable isotope labeling for identifying the missing specialized metabolism in plants

scientific article published on 06 May 2020

Highly sensitive detection of E2 activity in ubiquitination using an artificial RING finger

scientific article published on 17 January 2017

Hydrogen Rearrangement Rules: Computational MS/MS Fragmentation and Structure Elucidation Using MS-FINDER Software

scientific article

Identification of Serratane Synthase Gene from the Fern Lycopodium clavatum.

scientific article published on 19 January 2017

Identification of a 3β-Hydroxysteroid Dehydrogenase/ 3-Ketosteroid Reductase Involved in α-Tomatine Biosynthesis in Tomato

scientific article published on 01 June 2019

Identification of a Flavonol 7-O-Rhamnosyltransferase Gene Determining Flavonoid Pattern inArabidopsisby Transcriptome Coexpression Analysis and Reverse Genetics

article

Identification of a flavin-containing S-oxygenating monooxygenase involved in alliin biosynthesis in garlic

scientific article published on September 2015

Identification of ecdysteroidogenic enzyme genes and their expression during pupal diapause in the cabbage armyworm, Mamestra brassicae.

scientific article published on 25 January 2017

Identification of potential genes involved in triterpenoid saponins biosynthesis in Gleditsia sinensis by transcriptome and metabolome analyses

scientific article published on 13 December 2018

Identification of α-Tomatine 23-Hydroxylase Involved in the Detoxification of a Bitter Glycoalkaloid

scientific article published on 01 January 2020

Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination

scholarly article

Impact of the plastidial stringent response in plant growth and stress responses.

scientific article

Improvement of memory recall by quercetin in rodent contextual fear conditioning and human early-stage Alzheimer's disease patients

scientific article published on 3 May 2016

Improvement of the quantitative differential metabolome pipeline for gas chromatography-mass spectrometry data by automated reliable peak selection

In silico assessment of gene function involved in cysteine biosynthesis in Arabidopsis: expression analysis of multiple isoforms of serine acetyltransferase.

scientific article

Increased bioplastic production with an RNA polymerase sigma factor SigE during nitrogen starvation in Synechocystis sp. PCC 6803.

scientific article published on 15 July 2013

Induced accumulation of glucuronosyldiacylglycerol in tomato and soybean under phosphorus deprivation

scientific article published on 12 February 2015

Induced production of specialized steroids by transcriptional reprogramming in Petunia hybrida

scientific article published in October 2023

Informatics framework of traditional Sino-Japanese medicine (Kampo) unveiled by factor analysis

scientific article

Inhibition of CUTIN DEFICIENT 2 Causes Defects in Cuticle Function and Structure and Metabolite Changes in Tomato Fruit

scientific article published on 2 August 2013

Inhibitory Substances from Myriophyllum brasiliense on Growth of Blue-Green Algae

scientific article published on 17 March 2005

Inhibitory effect of a dimerization-arm-mimetic peptide on EGF receptor activation

scientific article published on 23 April 2009

Insertional inactivation of the methionine s-methyltransferase gene eliminates the s-methylmethionine cycle and increases the methylation ratio

scientific article published in April 2003

Intact-cell-based surface plasmon resonance measurements for ligand affinity evaluation of a membrane receptor

scientific article published on 29 September 2011

Integrated analysis of the effects of cold and dehydration on rice metabolites, phytohormones, and gene transcripts

article

Integrated analysis of transcriptome and metabolome of Arabidopsis albino or pale green mutants with disrupted nuclear-encoded chloroplast proteins

scientific article

Integrated metabolomics and phytochemical genomics approaches for studies on rice

scientific article

Integrated metabolomics for abiotic stress responses in plants

scientific article

Integrated omics analysis of specialized metabolism in medicinal plants

scientific article published on 21 January 2017

Integrated omics approaches in plant systems biology

scientific article published on December 2009

Integrating genomics and metabolomics for engineering plant metabolic pathways

scientific article

Integrating transcriptome and target metabolome variability in doubled haploids of Allium cepa for abiotic stress protection

Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana

scholarly article

Integrative omics approaches revealed a crosstalk among phytohormones during tuberous root development in cassava

scientific article published on 05 August 2020

Interplay of SLIM1 and miR395 in the regulation of sulfate assimilation in Arabidopsis.

scientific article

Isolation and characterization of anthocyanin 5-O-glucosyltransferase in Perilla frutescens var. crispa by differential display

scientific article published in January 2006

Isolation and enzymatic synthesis of an ester alkaloid, (−)-3β-hydroxy-13α-tigloyloxylupanine, from Cytisus scoparius

Isolation of (+)-maackiamine (norammodendrine) from the flowers of Maackia amurensis

scientific article published on 25 July 2002

Isolation of a New Alkaloid (-)-0- Acetylbaptifoline and the Absolute Stereochemical Relationships of Lupine Alkaloids in Thermopsis chinensis

scientific article published on 30 May 2007

Isotopic Combinatomer Analysis Provides in Vivo Evidence of the Direct Epimerization of Monoglucosyl Diacylglycerol in Cyanobacteria.

scientific article

Jasmonate-Responsive ERF Transcription Factors Regulate Steroidal Glycoalkaloid Biosynthesis in Tomato

scientific article published on 15 April 2016

KAGIANA: an excel-based tool for retrieving summary information on Arabidopsis genes

scientific article

KNApSAcK Family Databases: Integrated Metabolite-Plant Species Databases for Multifaceted Plant Research

scholarly article

KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data

scientific article

KaPPA-view: a web-based analysis tool for integration of transcript and metabolite data on plant metabolic pathway maps

scientific article

Keeping the shape of plant tissue for visualizing metabolite features in segmentation and correlation analysis of imaging mass spectrometry in Asparagus officinalis

article

Ky-2, a Histone Deacetylase Inhibitor, Enhances High-Salinity Stress Tolerance in Arabidopsis thaliana

scientific article published on 12 December 2015

LC/PDA/ESI-MS Profiling and Radical Scavenging Activity of Anthocyanins in Various Berries

scientific article

Landscape of the lipidome and transcriptome under heat stress in Arabidopsis thaliana

scientific article

Lanosterol synthase in dicotyledonous plants

scientific article published on 10 March 2006

Leaf oil body functions as a subcellular factory for the production of a phytoalexin in Arabidopsis

scientific article

Licorice beta-amyrin 11-oxidase, a cytochrome P450 with a key role in the biosynthesis of the triterpene sweetener glycyrrhizin

scientific article

Ligand-dependent responses of the silkworm prothoracicotropic hormone receptor, Torso, are maintained by unusual intermolecular disulfide bridges in the transmembrane region.

scientific article

Linkage between circadian clock and tricarboxylic acid cycle in Arabidopsis

scientific article published on 13 July 2009

Linkage mapping, molecular cloning and functional analysis of soybean gene Fg2 encoding flavonol 3-O-glucoside (1 → 6) rhamnosyltransferase

scientific article published on 27 September 2013

Linkage mapping, molecular cloning and functional analysis of soybean gene Fg3 encoding flavonol 3-O-glucoside/galactoside (1 → 2) glucosyltransferase

scientific article published on 23 May 2015

LipidBlast templates as flexible tools for creating new in-silico tandem mass spectral libraries

scientific article

Lipidomic analysis of soybean leaves revealed tissue-dependent difference in lipid remodeling under phosphorus-limited growth conditions

scientific article published on 02 March 2017

Lupin alkaloids from the seeds of Lupinus termis

article published in 2002

Lupin alkaloids from the seeds of Thermopsis lupinoides

scientific article published on 25 July 2002

Lupin alkaloids fromSophora exigua

Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in leguminosae

scientific article

Lysine-derived Alkaloids: Overview and Update on Biosynthesis and Medicinal Applications with Emphasis on Quinolizidine Alkaloids.

scientific article published on 6 May 2016

METABOLITE PROFILING OF SHOOT EXTRACTS, ROOT EXTRACTS, AND ROOT EXUDATES OF RICE PLANT UNDER PHOSPHORUS DEFICIENCY

article

MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites

scientific article

Maize Glossy2 and Glossy2-like Genes Have Overlapping and Distinct Functions in Cuticular Lipid Deposition

scientific article published on 19 May 2020

Mass spectra-based framework for automated structural elucidation of metabolome data to explore phytochemical diversity

scientific article

Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices

scientific article published in 2021

MassBank: a public repository for sharing mass spectral data for life sciences

scientific article (publication date: 7 July 2010)

Mechanistic Study on the Oxidation of Anthocyanidin Synthase by Quantum Mechanical Calculation

scientific article published on 15 May 2006

Mechanistic studies on three 2-oxoglutarate-dependent oxygenases of flavonoid biosynthesis: anthocyanidin synthase, flavonol synthase, and flavanone 3beta-hydroxylase

scientific article (publication date: 9 January 2004)

Medicago glucosyltransferase UGT72L1: potential roles in proanthocyanidin biosynthesis

scientific article published on 17 April 2013

Members of the LBD family of transcription factors repress anthocyanin synthesis and affect additional nitrogen responses in Arabidopsis

scientific article published on 20 November 2009

Metabolic Control of Gametophore Shoot Formation through Arginine in the Moss Physcomitrium patens

scientific article published on 01 September 2020

Metabolic Profiling of Developing Pear Fruits Reveals Dynamic Variation in Primary and Secondary Metabolites, Including Plant Hormones

scientific article published on 13 July 2015

Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs.

scientific article published on 21 May 2018

Metabolic diversification of nitrogen-containing metabolites by the expression of a heterologous lysine decarboxylase gene in Arabidopsis

scientific article published on 27 August 2019

Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A.

scientific article

Metabolic profiling and cytological analysis of proanthocyanidins in immature seeds of Arabidopsis thaliana flavonoid accumulation mutants

scientific article published on 18 February 2010

Metabolic profiling of flavonoids in Lotus japonicus using liquid chromatography Fourier transform ion cyclotron resonance mass spectrometry

scientific article published on 31 July 2007

Metabolic switching of astringent and beneficial triterpenoid saponins in soybean is achieved by a loss-of-function mutation in cytochrome P450 72A69.

scientific article published on 24 October 2016

Metabolic variation in the pulps of two durian cultivars: Unraveling the metabolites that contribute to the flavor

scientific article published on 15 June 2018

Metabolite Profiling of Root Exudates of Common Bean under Phosphorus Deficiency ⬇️

scientific article published on 16 July 2014

Metabolite analyses of single cells

scientific article

Metabolite and Phytohormone Profiling Illustrates Metabolic Reprogramming as an Escape Strategy of Deepwater Rice during Partially Submerged Stress

scientific article published on 14 February 2020

Metabolite profiling of alkaloids and strictosidine synthase activity in camptothecin producing plants

scientific article published in February 2003

Metabolite profiling of soybean root exudates under phosphorus deficiency ⬇️

Metabolite/phytohormone-gene regulatory networks in soybean organs under dehydration conditions revealed by integration analysis

scientific article published on 18 February 2020

Metabolome Analysis of Oryza sativa (Rice) Using Liquid Chromatography-Mass Spectrometry for Characterizing Organ Specificity of Flavonoids with Anti-inflammatory and Anti-oxidant Activity

scientific article published on January 2016

Metabolome-genome-wide association study dissects genetic architecture for generating natural variation in rice secondary metabolism

scientific article published on 3 November 2014

Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis. ⬇️

scientific article published on 14 May 2014

Metabolomic Evaluation of the Quality of Leaf Lettuce Grown in Practical Plant Factory to Capture Metabolite Signature

scientific article published on 27 June 2018

Metabolomic Screening Applied to Rice FOX Arabidopsis Lines Leads to the Identification of a Gene-Changing Nitrogen Metabolism

article

Metabolomic analysis reveals rewiring ofSynechocystis sp. PCC 6803 primary metabolism byntcAoverexpression

scientific article published on 29 August 2014

Metabolomic approaches toward understanding nitrogen metabolism in plants

scientific article published on 10 January 2011

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach. ⬇️

scientific article published on January 2011

Metabolomics analysis of 'Housui' Japanese pear flower buds during endodormancy reveals metabolic suppression by thermal fluctuation

scientific article published on 2 March 2018

Metabolomics and complementary techniques to investigate the plant phytochemical cosmos

scientific article published in 2021

Metabolomics and differential gene expression in anthocyanin chemo-varietal forms of Perilla frutescens

scientific article published in March 2003

Metabolomics continues to expand: highlights from the 2015 metabolomics conference

Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice.

scientific article

Metabolomics for functional genomics, systems biology, and biotechnology

scientific article published on January 2010

Metabolomics for unknown plant metabolites

article

Metabolomics of a single vacuole reveals metabolic dynamism in an alga Chara australis

article by Akira Oikawa et al published October 2011 in Plant Physiology

Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light

scientific article published on 20 May 2011

Metabolomics with 15N Labeling for Characterizing Missing Monoterpene Indole Alkaloids in Plants ⬇️

scientific article published on 21 February 2020

Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana

scientific article published in May 2009

Modern plant metabolomics: advanced natural product gene discoveries, improved technologies, and future prospects

scientific article

Molecular Basis of C-30 Product Regioselectivity of Legume Oxidases Involved in High-Value Triterpenoid Biosynthesis

scientific article published on 26 November 2019

Molecular Components of Arabidopsis Intact Vacuoles Clarified with Metabolomic and Proteomic Analyses

scientific article published on 01 July 2018

Molecular Evolution and Functional Characterization of a Bifunctional Decarboxylase Involved in Lycopodium Alkaloid Biosynthesis

scientific article published on 14 June 2016

Molecular basis of wing coloration in a Batesian mimic butterfly, Papilio polytes.

scientific article

Molecular characterization of a novel quinolizidine alkaloid O-tigloyltransferase: cDNA cloning, catalytic activity of recombinant protein and expression analysis in Lupinus plants

scientific article published on 19 January 2005

Molecular genetic study on the anthocyanin chemotypes of Perilla frutescens var. crispa

scientific article published on 01 March 2011

Molecular regulation of assimilatory sulfur metabolism in plants

scientific article published in November 2003

Multiomics in grape berry skin revealed specific induction of the stilbene synthetic pathway by ultraviolet-C irradiation

scientific article published on 11 March 2015

Multiomics-based characterization of specialized metabolites biosynthesis in Cornus officinalis

scientific article published on 19 May 2020

Mutations in jasmonoyl-L-isoleucine-12-hydroxylases suppress multiple JA-dependent wound responses in Arabidopsis thaliana

scientific article published on 8 March 2016

Mutations in topoisomerase I as a self-resistance mechanism coevolved with the production of the anticancer alkaloid camptothecin in plants

scholarly article

NTA-mediated protein capturing strategy in screening experiments for small organic molecules by surface plasmon resonance

scientific article

Natural and induced variations in transcriptional regulator genes result in low‐nicotine phenotypes in tobacco

scientific article published in 2022

Network Analyses Reveal Shifts in Transcript Profiles and Metabolites That Accompany the Expression of SUN and an Elongated Tomato Fruit

scientific article published on 4 May 2015

Network analysis for gene discovery in plant-specialized metabolism

scientific article published on 21 February 2013

New Lupine Alkaloids from the Seedlings of Lupinus hirsutus and Change of Alkaloid Pattern with Germination

article by Satoshi Takamatsu et al published 17 March 2005 in Journal of Natural Products

New otonecine-type pyrrolizidine alkaloid from Petasites japonicus

scientific article published on 19 February 2019

Novel bioresources for studies of Brassica oleracea: identification of a kale MYB transcription factor responsible for glucosinolate production

scientific article

Novel non-peptidic and small-sized BACE1 inhibitors.

scientific article published on 19 January 2008

Omics data input for metabolic modeling

scientific article

Omics-based approaches to methionine side chain elongation in Arabidopsis: characterization of the genes encoding methylthioalkylmalate isomerase and methylthioalkylmalate dehydrogenase

scientific article published on 3 June 2009

Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis

scholarly article

Omnipotent role of archaeal elongation factor 1 alpha (EF1α) in translational elongation and termination, and quality control of protein synthesis ⬇️

scientific article published on October 25, 2010

Onocerin Biosynthesis Requires Two Highly Dedicated Triterpene Cyclases in a Fern Lycopodium clavatum.

scientific article

OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development

scientific article published on 24 March 2014

Over-expression of transcription associated factor genes co-expressed with genes of the mevalonate pathway, upstream of isoprenoid biosynthesis, in Arabidopsis cultured cells

article

Overexpression of an Arabidopsis thaliana galactinol synthase gene improves drought tolerance in transgenic rice and increased grain yield in the field

scientific article

PRIMe Update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulation

scientific article

PRIMe: a Web site that assembles tools for metabolomics and transcriptomics.

scientific article published in January 2008

Pathway-level acceleration of glycogen catabolism by a response regulator in the cyanobacterium Synechocystis species PCC 6803.

scientific article published on 12 February 2014

Pause-and-stop: the effects of osmotic stress on cell proliferation during early leaf development in Arabidopsis and a role for ethylene signaling in cell cycle arrest

scientific article

Perspective: functional genomics towards new biotechnology in medicinal plants

article

Phloem-localizing sulfate transporter, Sultr1;3, mediates re-distribution of sulfur from source to sink organs in Arabidopsis

scientific article published in 2003

Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation

scientific article

Physiological roles of the beta-substituted alanine synthase gene family in Arabidopsis

scientific article published on 16 November 2007

Phytochemical Genomics on the Way

scientific article published on 01 May 2013

Phytochemical genomics in Arabidopsis thaliana: A case study for functional identification of flavonoid biosynthesis genes

article

Phytochemical genomics--a new trend

scientific article

Plant Lipidomics Using UPLC-QTOF-MS

scientific article published on 01 January 2018

Plant lipidomics based on hydrophilic interaction chromatography coupled to ion trap time-of-flight mass spectrometry

scientific article published on 31 May 2011

Plasma membrane aquaporin AqpZ protein is essential for glucose metabolism during photomixotrophic growth of Synechocystis sp. PCC 6803.

scientific article

Pleiotropic effect of sigE over-expression on cell morphology, photosynthesis and hydrogen production in Synechocystis sp. PCC 6803.

scientific article published on 19 September 2013

Post-genomics approaches for the elucidation of plant adaptive mechanisms to sulphur deficiency

scientific article published on 18 June 2004

Posttranscriptional regulation of high-affinity sulfate transporters in Arabidopsis by sulfur nutrition

scientific article published on 24 August 2007

Potential of metabolomics as a functional genomics tool.

scientific article

Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model

scientific article

Producing the sulfur-containing metabolite asparaptine in Asparagus calluses and a suspension cell line

scientific article published on 01 December 2019

Proposed quantitative and alphanumeric metabolite identification metrics

Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition.

scientific article published on 19 October 2006

Publisher Correction: A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms

scientific article published on 01 May 2019

Pyrophosphate inhibits gluconeogenesis by restricting UDP-glucose formation in vivo

scientific article published in Scientific Reports

Quantitative evaluation of refolding conditions for a disulfide-bond-containing protein using a concise ¹⁸O-labeling technique.

scientific article

Quinolizidine alkaloid biosynthesis: recent advances and future prospects

scientific article published on 26 October 2012

RIKEN tandem mass spectral database (ReSpect) for phytochemicals: A plant-specific MS/MS-based data resource and database

scientific article (publication date: October 2012)

RNA-seq Transcriptome Analysis of Panax japonicus, and Its Comparison with Other Panax Species to Identify Potential Genes Involved in the Saponins Biosynthesis

scientific article published on 12 April 2016

Recent advances in the biosynthesis and accumulation of anthocyanins

scientific article

Recent advances of metabolomics in plant biotechnology

scientific article published on 29 July 2011

Recent advances on reaction mechanism of anthocyanin biosynthesis

scientific article published in March 2002

Recommendations for reporting metabolite data

article by Alisdair R Fernie et al published July 2011 in The Plant Cell

Reconfirmation of the structure of (+)-retamine fromLygos raetam Var.sarcocarpa by X-ray analysis

scientific article published on 8 March 2007

Regulatory mechanisms for anthocyanin biosynthesis in chemotypes of Perilla frutescens var. crispa

Remodels Chloroplastic Monogalactosyldiacylglycerol by Liberating α-Linolenic Acid in Arabidopsis Leaves under Heat Stress

scientific article published on 02 July 2018

Responses of Populus trichocarpa galactinol synthase genes to abiotic stresses

scientific article

Review: Genetically modified plants for the promotion of human health

scientific article published on 2 November 2006

Revisiting anabasine biosynthesis in tobacco hairy roots expressing plant lysine decarboxylase gene by using 15 N-labeled lysine

Rice Metabolomics

Rice-Arabidopsis FOX line screening with FT-NIR-based fingerprinting for GC-TOF/MS-based metabolite profiling

RiceFOX: a database of Arabidopsis mutant lines overexpressing rice full-length cDNA that contains a wide range of trait information to facilitate analysis of gene function

scientific article

Role of Metabolomics in Crop Improvement

scientific article published in 2012

Role of camalexin, indole glucosinolates, and side chain modification of glucosinolate-derived isothiocyanates in defense of Arabidopsis against Sclerotinia sclerotiorum

scientific article published on 27 April 2011

Roles of lipids as signaling molecules and mitigators during stress response in plants

scientific article published on 19 June 2014

S-Alk(en)ylcysteine sulfoxides in the genus Allium: proposed biosynthesis, chemical conversion, and bioactivities

scientific article published on 01 August 2019

Seasonal Alterations in Organic Phosphorus Metabolism Drive the Phosphorus Economy of Annual Growth in F. sylvatica Trees on P-Impoverished Soil.

scientific article

Seed-coat protective neolignans are produced by the dirigent protein AtDP1 and the laccase AtLAC5 in Arabidopsis

scientific article published on 22 March 2021

Simultaneous quantification of individual intermediate steroids in silkworm ecdysone biosynthesis by liquid chromatography-tandem mass spectrometry with multiple reaction monitoring.

scientific article

Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells.

scientific article

Solid-phase extraction for metabolomic analysis of high-salinity samples by capillary electrophoresis-mass spectrometry

scientific article published on 18 March 2011

Solution structure of the PHD finger from the human KIAA1045 protein.

scientific article published on 12 February 2018

Species-independent analytical tools for next-generation agriculture

scientific article published on 30 November 2020

Statistical Indices for Simultaneous Large-Scale Metabolite Detections for a Single NMR Spectrum

article by Eisuke Chikayama et al published March 2010 in Analytical Chemistry

Stereostructure of (-)-Multiflorine N-Oxide: A New Lupin Alkaloid from Lupinus hirsutus

Sterol side chain reductase 2 is a key enzyme in the biosynthesis of cholesterol, the common precursor of toxic steroidal glycoalkaloids in potato

scientific article published on 12 September 2014

Structural basis for mRNA surveillance by archaeal Pelota and GTP-bound EF1α complex

scientific article

Structural basis for translation termination by archaeal RF1 and GTP-bound EF1  complex

scientific article

Structural insight of DNA topoisomerases I from camptothecin-producing plants revealed by molecular dynamics simulations

scientific article

Studies on vacuolar membrane microdomains isolated from Arabidopsis suspension-cultured cells: local distribution of vacuolar membrane proteins

scientific article

Subcellular localization of acyltransferases for quinolizidine alkaloid biosynthesis in Lupinus

scientific article published on 23 April 2003

Successful expression of a novel bacterial gene for pinoresinol reductase and its effect on lignan biosynthesis in transgenic Arabidopsis thaliana.

scientific article published on 24 July 2014

Succinic semialdehyde dehydrogenase is involved in the robust patterning of Arabidopsis leaves along the adaxial-abaxial axis

scientific article

Such hydrophobic peptides as dansylated mastoparan can elevate the fertilization membrane of sea urchin eggs

scientific article published on 01 October 1995

Sulfur assimilation in photosynthetic organisms: molecular functions and regulations of transporters and assimilatory enzymes.

scientific article published on January 2011

Sulfur availability regulates plant growth via glucose-TOR signaling

scientific article published on 27 October 2017

Sulfur deficiency-induced repressor proteins optimize glucosinolate biosynthesis in plants

scientific article published on 07 October 2016

Sulfur-Responsive Elements in the 3'-Nontranscribed Intergenic Region Are Essential for the Induction of SULFATE TRANSPORTER 2;1 Gene Expression in Arabidopsis Roots under Sulfur Deficiency

scientific article published on 8 April 2015

Sulphur starvation induces the expression of microRNA-395 and one of its target genes but in different cell types

scientific article

Suppression of camptothecin biosynthetic genes results in metabolic modification of secondary products in hairy roots of Ophiorrhiza pumila

article

Suppression of carotenoid synthesis in transgenic Arabidopsis cultured cells over-expressing the AHL29/SOB3 gene

article

Synthesis of polyunsaturated fatty acid-containing glucuronosyl-diacylglycerol through direct glycosylation

Tandem Mass Spectrum Similarity-Based Network Analysis Using ¹³C-Labeled and Non-labeled Metabolome Data to Identify the Biosynthetic Pathway of the Blood Pressure-Lowering Asparagus Metabolite Asparaptine A

scientific article published in 2021

Targeted genome editing in tetraploid potato through transient TALEN expression by Agrobacterium infection

scientific article published on 01 June 2020

Tashiromine; a New Alkaloid from Maackia tashiroi

The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

scientific article

The Basic Helix-Loop-Helix Transcription Factor GubHLH3 Positively Regulates Soyasaponin Biosynthetic Genes in Glycyrrhiza uralensis

scientific article published on 01 April 2018

The Energetic Viability of Δ¹-Piperideine Dimerization in Lysine-derived Alkaloid Biosynthesis

scholarly article by Hajime Sato published in August 2018

The Structural Integrity of Lignin Is Crucial for Resistance against Parasitism in Rice

scientific article published on 22 January 2019

The Time Is Right to Focus on Model Organism Metabolomes

scientific article published on 15 February 2016

The flavonoid biosynthetic pathway in Arabidopsis: structural and genetic diversity

scientific article published on 16 February 2013

The function of SULTR2;1 sulfate transporter during seed development in Arabidopsis thaliana

article

The metabolic profile of grape berry skin and a comparison of metabolomes before veraison and at harvest

The prediction of local modular structures in a co-expression network based on gene expression datasets.

scientific article published in October 2009

The significance of cysteine synthesis for acclimation to high light conditions

scientific article published on January 2014

The unique N-terminal zinc finger of synaptotagmin-like protein 4 reveals FYVE structure.

scientific article

The zinc finger domain of RING finger protein 141 reveals a unique RING fold.

scientific article published on 25 May 2017

Third DWF1 paralog in Solanaceae, sterol Δ-isomerase, branches withanolide biosynthesis from the general phytosterol pathway

article published in the Proceedings of the National Academy of Sciences of the United States of America

Tissue-specific transcriptome analysis reveals cell wall metabolism, flavonol biosynthesis and defense responses are activated in the endosperm of germinating Arabidopsis thaliana seeds

scientific article published on 5 December 2011

Tomato Glutamate Decarboxylase Genes SlGAD2 and SlGAD3 Play Key Roles in Regulating γ-Aminobutyric Acid Levels in Tomato (Solanum lycopersicum).

scientific article published on 25 May 2015

Top-down Metabolomic Approaches for Nitrogen-Containing Metabolites.

scientific article

Top-down Targeted Metabolomics Reveals a Sulfur-Containing Metabolite with Inhibitory Activity against Angiotensin-Converting Enzyme in Asparagus officinalis

scientific article published on 29 April 2015

Toward better annotation in plant metabolomics: isolation and structure elucidation of 36 specialized metabolites from Oryza sativa (rice) by using MS/MS and NMR analyses

scientific article

Toward genome-wide metabolotyping and elucidation of metabolic system: metabolic profiling of large-scale bioresources

scientific article

Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in cold stress response.

scientific article

Transcriptome Analysis of Nine Tissues to Discover Genes Involved in the Biosynthesis of Active Ingredients in Sophora flavescens

scientific article published on January 2015

Transcriptome Analysis of the Hierarchical Response of Histone Deacetylase Proteins That Respond in an Antagonistic Manner to Salinity Stress

scientific article published on 18 October 2019

Transcriptome analysis of Pueraria candollei var. mirifica for gene discovery in the biosyntheses of isoflavones and miroestrol

scientific article published on 26 December 2019

Transcriptome coexpression analysis using ATTED-II for integrated transcriptomic/metabolomic analysis

scientific article published in January 2013

Transcriptome data modeling for targeted plant metabolic engineering

scientific article

Transcriptomic and Metabolomic Reprogramming from Roots to Haustoria in the Parasitic Plant, Thesium chinense.

scientific article published in April 2018

Transcriptomic landscape of Pueraria lobata demonstrates potential for phytochemical study

scientific article published on 22 June 2015

Transcriptomic, Hormonomic and Metabolomic Analyses Highlighted the Common Modules Related to Photosynthesis, Sugar Metabolism and Cell Division in Parthenocarpic Tomato Fruits during Early Fruit Set

scientific article published on 23 April 2022

Transgenic rice seed expressing flavonoid biosynthetic genes accumulate glycosylated and/or acylated flavonoids in protein bodies

scientific article

Transport of camptothecin in hairy roots of Ophiorrhiza pumila

scientific article published on 29 October 2007

Triterpene functional genomics in licorice for identification of CYP72A154 involved in the biosynthesis of glycyrrhizin

scientific article published on 29 November 2011

Triterpenoid biosynthesis and engineering in plants

scientific article published on 30 June 2011

Two Cytochrome P450 Monooxygenases Catalyze Early Hydroxylation Steps in the Potato Steroid Glycoalkaloid Biosynthetic Pathway.

scientific article

Two distinct high-affinity sulfate transporters with different inducibilities mediate uptake of sulfate in Arabidopsis roots

scientific article published in February 2002

Two flavonoid glucosyltransferases from Petunia hybrida: molecular cloning, biochemical properties and developmentally regulated expression

scientific article published in March 2002

Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana

scientific article

UGT73C6 and UGT78D1, glycosyltransferases involved in flavonol glycoside biosynthesis in Arabidopsis thaliana ⬇️

scientific article

UGT79B31 is responsible for the final modification step of pollen-specific flavonoid biosynthesis in Petunia hybrida

scientific article published on 6 December 2017

Ultrahigh resolution metabolomics for S-containing metabolites

scientific article

Unbiased characterization of genotype-dependent metabolic regulations by metabolomic approach in Arabidopsis thaliana

scientific article

Unbiased profiling of volatile organic compounds in the headspace of Allium plants using an in-tube extraction device ⬇️

scientific article

Unique RING finger structure from the human HRD1 protein

scientific article published on 13 December 2018

Unique auto-ubiquitination activities of artificial RING fingers in cancer cells

scientific article published on 24 September 2018

Using metabolomic approaches to explore chemical diversity in rice

scientific article

Using metabolomic approaches to explore chemical diversity in rice.

scientific article

Verification of protein disulfide bond arrangement by in-gel tryptic digestion under entirely neutral pH conditions

scientific article

Visualization of metabolite identifier information

WIND1 induces dynamic metabolomic reprogramming during regeneration in Brassica napus

scientific article published on 17 July 2018

Widely targeted metabolomics and coexpression analysis as tools to identify genes involved in the side-chain elongation steps of aliphatic glucosinolate biosynthesis

scientific article published on 10 July 2010

Widely targeted metabolomics based on large-scale MS/MS data for elucidating metabolite accumulation patterns in plants

scientific article

Zinc finger domain of the human DTX protein adopts a unique RING fold

scientific article published on 12 April 2019

[Analytical system for metabolomics]

scientific article published on 01 August 2004

beta-Secretase inhibitors: modification at the P4 position and improvement of inhibitory activity in cultured cells

scientific article published on 06 June 2006

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