List of works - Pritish Kumar Varadwaj

3D Structure Generation, Molecular Dynamics and Docking Studies of IRHOM2 Protein Involved in Cancer & Rheumatoid Arthritis

scientific article published on 24 November 2015

A Density Functional Theory and Quantum Theory of Atoms-in-Molecules Analysis of the Stability of Ni(II) Complexes of Some Amino Alcohol Ligands

scientific article published on 31 May 2011

A comparative study of support vector machine, artificial neural network and bayesian classifier for mutagenicity prediction

scientific article published on 14 June 2011

A prediction model for oral bioavailability of drugs using physicochemical properties by support vector machine.

scientific article published on July 2011

An integrated epigenome and transcriptome analysis identifies PAX2 as a master regulator of drug resistance in high grade pancreatic ductal adenocarcinoma

scientific article published on 17 October 2019

Annotation of Hypothetical Proteins: a Functional Genomics Approach

Antiviral therapy with nucleotide/nucleoside analogues in chronic hepatitis B: A meta-analysis of prospective randomized trials

scientific article published on 16 April 2016

Comparative Analysis of AGPase Genes and Encoded Proteins in Eight Monocots and Three Dicots with Emphasis on Wheat

scientific article

Count-based transcriptome analysis to identify differentially expressed genes for breast cancer

article

DUSR (Distributed Ultrafast Shape Recognition): a Hadoop Based Tool to Identify Similar Shaped Ligand Molecules

Deciphering genome-wide WRKY gene family of Triticum aestivum L. and their functional role in response to Abiotic stress

scientific article published on 20 September 2018

DeepLNC, a long non-coding RNA prediction tool using deep neural network

scholarly article by Rashmi Tripathi et al published 10 June 2016 in Network modeling and analysis in health informatics and bioinformatics

Detection of Splice Sites Using Support Vector Machine

Effect of STAT3 inhibitor in chronic myeloid leukemia associated signaling pathway: a mathematical modeling, simulation and systems biology study.

scientific article

Efficacy of Sucralfate in Reflux Disease in comparison to H2 – Receptor Antagonist: A Meta-Analysis of Randomized Trials

Embryo and endosperm specific comparative transcriptome analysis of triticum aestivum in response to ABA and H 2 O 2 stress

Erratum to: Flavonoids as Multi-Target Inhibitors for Proteins Associated with Ebola Virus: In Silico Discovery Using Virtual Screening and Molecular Docking Studies

scientific article published on 18 September 2015

Estimating percentage epigenetic modifications in human genome using NGS data

article

Exploration of new drug-like inhibitors for serine/threonine protein phosphatase 5 of Plasmodium falciparum: a docking and simulation study.

scientific article published on 13 May 2015

Exploring dual inhibitors for STAT1 and STAT5 receptors utilizing virtual screening and dynamics simulation validation

article

Extrapolation of Inter Domain Communications and Substrate Binding Cavity of Camel HSP70 1A: A Molecular Modeling and Dynamics Simulation Study

scientific article

FGO: a novel ontology for identification of ligand functional group

scientific article published on 05 December 2007

Flavonoids as Multi-target Inhibitors for Proteins Associated with Ebola Virus: In Silico Discovery Using Virtual Screening and Molecular Docking Studies.

scientific article

Flavonoids as multi-target inhibitors for proteins associated with Ebola virus: in-silico discovery using virtual screening and molecular docking studies.

scientific article

Functional group based Ligand binding affinity scoring function at atomic environmental level

scientific article published on 12 January 2009

Fungome: Annotating proteins implicated in fungal pathogenesis

scientific article published on November 2010

Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency

scientific article

Identification of Dual Natural Inhibitors for Chronic Myeloid Leukemia by Virtual Screening, Molecular Dynamics Simulation and ADMET Analysis

scientific article published on 22 August 2015

Identification of Novel Abiotic Stress Proteins in Triticum aestivum Through Functional Annotation of Hypothetical Proteins.

scientific article

Identification of Novel Inhibitors for Disrupting EZH2-EED Interactions Involved in Cancer Epigenetics: An In-Silico Approach

Identification of novel dysregulated key genes in Breast cancer through high throughput ChIP-Seq data analysis

scientific article

In silico characterization of hypothetical proteins obtained from Mycobacterium tuberculosis H37Rv

scholarly article by Utkarsh Raj et al published 4 February 2017 in Network modeling and analysis in health informatics and bioinformatics

In silico identification of novel virulent protein of phytophthora infestans related to late blight disease

In-silico identification of inhibitors against mutated BCR-ABL protein of chronic myeloid leukemia: a virtual screening and molecular dynamics simulation study

scientific article published on 19 October 2015

Integrated analysis of dysregulated lncRNA expression in breast cancer cell identified by RNA-seq study

scholarly article by Rashmi Tripathi et al published October 2016 in Non-coding RNA Research

Molecular docking and dynamics simulation study of flavonoids as BET bromodomain inhibitors

scientific article

Next-generation sequencing revolution through big data analytics

Novel DOT1L ReceptorNatural Inhibitors Involved in Mixed Lineage Leukemia: a Virtual Screening, Molecular Docking and Dynamics Simulation Study

scientific article published on January 2015

Novel DOT1L ReceptorNatural Inhibitors Involved in Mixed Lineage Leukemia: a Virtual Screening, Molecular Docking and Dynamics Simulation Study

article

Novel Potent Plasmepsin-I (PMI) Inhibitors: An In-Silico Approach

Parameters Involved in Autophosphorylation in Chronic Myeloid Leukemia: a Systems Biology Approach.

scientific article published on January 2015

Prediction of Blood Brain Barrier Permeability of Ligands Using Sequential Floating Forward Selection and Support Vector Machine

Primary responses to salt stress in a halophyte, smooth cordgrass (Spartina alterniflora Loisel.).

scientific article

Reliability analysis of Wireless Sensor Network

Secondary metabolites from spice and herbs as potential multitarget inhibitors of SARS-CoV-2 proteins

scientific article published on 27 October 2020

Stem cells: An overview with respect to cardiovascular and renal disease

scientific article published on July 2010

Structural insights into conformational stability of both wild-type and mutant EZH2 receptor

scientific article published on 07 October 2016

Structure-Based Drug Designing and Simulation Studies for Finding Novel Inhibitors of Heat Shock Protein (HSP70) as Suppressors for Psoriasis

scientific article published on October 2016

Systemic Review on Chronic Myeloid Leukemia: Therapeutic Targets, Pathways and Inhibitors

article

Systems Biology: A powerful tool for drug development

article

Transcriptomic Analysis of Soil Grown T. aestivum cv. Root to Reveal the Changes in Expression of Genes in Response to Multiple Nutrients Deficiency

scientific article published on 22 June 2017

Two-phase clustering based aggregation of sensor data

Understanding the Mechanism of Cell Death in Gemcitabine Resistant Pancreatic Ductal Adenocarcinoma: A Systems Biology Approach

scientific article published on 01 November 2019

List of works by Pritish Kumar Varadwaj

3D Structure Generation, Molecular Dynamics and Docking Studies of IRHOM2 Protein Involved in Cancer & Rheumatoid Arthritis

A Density Functional Theory and Quantum Theory of Atoms-in-Molecules Analysis of the Stability of Ni(II) Complexes of Some Amino Alcohol Ligands

A comparative study of support vector machine, artificial neural network and bayesian classifier for mutagenicity prediction

A prediction model for oral bioavailability of drugs using physicochemical properties by support vector machine.

An integrated epigenome and transcriptome analysis identifies PAX2 as a master regulator of drug resistance in high grade pancreatic ductal adenocarcinoma

Annotation of Hypothetical Proteins: a Functional Genomics Approach

Antiviral therapy with nucleotide/nucleoside analogues in chronic hepatitis B: A meta-analysis of prospective randomized trials

Comparative Analysis of AGPase Genes and Encoded Proteins in Eight Monocots and Three Dicots with Emphasis on Wheat

Count-based transcriptome analysis to identify differentially expressed genes for breast cancer

DUSR (Distributed Ultrafast Shape Recognition): a Hadoop Based Tool to Identify Similar Shaped Ligand Molecules

Deciphering genome-wide WRKY gene family of Triticum aestivum L. and their functional role in response to Abiotic stress

DeepLNC, a long non-coding RNA prediction tool using deep neural network

Detection of Splice Sites Using Support Vector Machine

Effect of STAT3 inhibitor in chronic myeloid leukemia associated signaling pathway: a mathematical modeling, simulation and systems biology study.

Efficacy of Sucralfate in Reflux Disease in comparison to H2 – Receptor Antagonist: A Meta-Analysis of Randomized Trials

Embryo and endosperm specific comparative transcriptome analysis of triticum aestivum in response to ABA and H 2 O 2 stress

Erratum to: Flavonoids as Multi-Target Inhibitors for Proteins Associated with Ebola Virus: In Silico Discovery Using Virtual Screening and Molecular Docking Studies

Estimating percentage epigenetic modifications in human genome using NGS data

Exploration of new drug-like inhibitors for serine/threonine protein phosphatase 5 of Plasmodium falciparum: a docking and simulation study.

Exploring dual inhibitors for STAT1 and STAT5 receptors utilizing virtual screening and dynamics simulation validation

Extrapolation of Inter Domain Communications and Substrate Binding Cavity of Camel HSP70 1A: A Molecular Modeling and Dynamics Simulation Study

FGO: a novel ontology for identification of ligand functional group

Flavonoids as Multi-target Inhibitors for Proteins Associated with Ebola Virus: In Silico Discovery Using Virtual Screening and Molecular Docking Studies.

Flavonoids as multi-target inhibitors for proteins associated with Ebola virus: in-silico discovery using virtual screening and molecular docking studies.

Functional group based Ligand binding affinity scoring function at atomic environmental level

Fungome: Annotating proteins implicated in fungal pathogenesis

Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency

Identification of Dual Natural Inhibitors for Chronic Myeloid Leukemia by Virtual Screening, Molecular Dynamics Simulation and ADMET Analysis

Identification of Novel Abiotic Stress Proteins in Triticum aestivum Through Functional Annotation of Hypothetical Proteins.

Identification of Novel Inhibitors for Disrupting EZH2-EED Interactions Involved in Cancer Epigenetics: An In-Silico Approach

Identification of novel dysregulated key genes in Breast cancer through high throughput ChIP-Seq data analysis

In silico characterization of hypothetical proteins obtained from Mycobacterium tuberculosis H37Rv

In silico identification of novel virulent protein of phytophthora infestans related to late blight disease

In-silico identification of inhibitors against mutated BCR-ABL protein of chronic myeloid leukemia: a virtual screening and molecular dynamics simulation study

Integrated analysis of dysregulated lncRNA expression in breast cancer cell identified by RNA-seq study

Molecular docking and dynamics simulation study of flavonoids as BET bromodomain inhibitors

Next-generation sequencing revolution through big data analytics

Novel DOT1L ReceptorNatural Inhibitors Involved in Mixed Lineage Leukemia: a Virtual Screening, Molecular Docking and Dynamics Simulation Study

Novel DOT1L ReceptorNatural Inhibitors Involved in Mixed Lineage Leukemia: a Virtual Screening, Molecular Docking and Dynamics Simulation Study

Novel Potent Plasmepsin-I (PMI) Inhibitors: An In-Silico Approach

Parameters Involved in Autophosphorylation in Chronic Myeloid Leukemia: a Systems Biology Approach.

Prediction of Blood Brain Barrier Permeability of Ligands Using Sequential Floating Forward Selection and Support Vector Machine

Primary responses to salt stress in a halophyte, smooth cordgrass (Spartina alterniflora Loisel.).

Reliability analysis of Wireless Sensor Network

Secondary metabolites from spice and herbs as potential multitarget inhibitors of SARS-CoV-2 proteins

Stem cells: An overview with respect to cardiovascular and renal disease

Structural insights into conformational stability of both wild-type and mutant EZH2 receptor

Structure-Based Drug Designing and Simulation Studies for Finding Novel Inhibitors of Heat Shock Protein (HSP70) as Suppressors for Psoriasis

Systemic Review on Chronic Myeloid Leukemia: Therapeutic Targets, Pathways and Inhibitors

Systems Biology: A powerful tool for drug development

Transcriptomic Analysis of Soil Grown T. aestivum cv. Root to Reveal the Changes in Expression of Genes in Response to Multiple Nutrients Deficiency

Two-phase clustering based aggregation of sensor data

Understanding the Mechanism of Cell Death in Gemcitabine Resistant Pancreatic Ductal Adenocarcinoma: A Systems Biology Approach