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List of works by Frederick Klauschen

A systems analysis identifies a feedforward inflammatory circuit leading to lethal influenza infection

scientific article published on July 2013

Ataxia-telangiectasia-mutated protein kinase levels stratify patients with pancreatic adenocarcinoma into prognostic subgroups with loss being a strong indicator of poor survival

scientific article

CD8+ T Cells Orchestrate pDC-XCR1+ Dendritic Cell Spatial and Functional Cooperativity to Optimize Priming

scientific article published on 8 February 2017

Classical pathology and mutational load of breast cancer - integration of two worlds

scientific article published on 20 July 2015

Clinical and molecular characteristics of HNSCC patients with brain metastases: a retrospective study

scientific article

CognitionMaster: an object-based image analysis framework

scientific article published on 27 February 2013

Comprehensive analysis of clinico-pathological data reveals heterogeneous relations between atherosclerosis and cancer

scientific article

Comprehensive micro-scaled proteome and phosphoproteome characterization of archived retrospective cancer repositories

scientific article published on 11 June 2021

Computational modeling of cellular signaling processes embedded into dynamic spatial contexts

scientific article

Computational reconstruction of cell and tissue surfaces for modeling and data analysis

scientific article published on 4 June 2009

Cutoff Finder: a comprehensive and straightforward Web application enabling rapid biomarker cutoff optimization

scientific article

Expression patterns of CD168 correlate with the stage and grade of squamous cell carcinoma of head and neck

scientific article published on 13 February 2017

Fate mapping reveals origin and dynamics of lymph node follicular dendritic cells

scientific article

Fibrosis in low-grade follicular lymphoma - a link to the TH2 immune reaction

scientific article published on 13 October 2016

Global alterations of DNA methylation in cholangiocarcinoma target the Wnt signaling pathway

scientific article published on 24 December 2013

High SIRT1 expression is a negative prognosticator in pancreatic ductal adenocarcinoma

scientific article

High extracellular matrix metalloproteinase inducer/CD147 expression is strongly and independently associated with poor prognosis in colorectal cancer ⬇️

scientific article published on March 12, 2012

Histological tumor typing in the age of molecular profiling

scientific article published on 05 September 2015

Ioncopy: a novel method for calling copy number alterations in amplicon sequencing data including significance assessment

scientific article

Less developed corpus callosum in dyslexic subjects--a structural MRI study

scientific article

Machine learning analysis of DNA methylation profiles distinguishes primary lung squamous cell carcinomas from head and neck metastases

scientific article published on 01 September 2019

Metabolomics of human breast cancer: new approaches for tumor typing and biomarker discovery

scientific article

Methylation of RAD51B, XRCC3 and other homologous recombination genes is associated with expression of immune checkpoints and an inflammatory signature in squamous cell carcinoma of the head and neck, lung and cervix

scientific article

Multicenter Evaluation of a Novel Automated Rapid Detection System of BRAF Status in Formalin-Fixed, Paraffin-Embedded Tissues

scientific article

Multicolor fate mapping of Langerhans cell homeostasis

scientific article published on 12 August 2013

Multiscale modeling for biologists

scientific article (publication date: 2009)

Mutations in POLE and survival of colorectal cancer patients--link to disease stage and treatment

scientific article

Mutations in genes encoding PI3K-AKT and MAPK signaling define anogenital papillary hidradenoma

scientific article published on 23 October 2015

New network topology approaches reveal differential correlation patterns in breast cancer

scientific article

On Pixel-Wise Explanations for Non-Linear Classifier Decisions by Layer-Wise Relevance Propagation

scientific article

Postoperative Complications Deteriorate Long-Term Outcome in Pancreatic Cancer Patients ⬇️

scientific article published on August 31, 2011

Prolyl hydroxylase domain 2 protein is a strong prognostic marker in human gastric cancer

scientific article

Quantification of lymph node transit times reveals differences in antigen surveillance strategies of naive CD4+ and CD8+ T cells

scientific article

Quantifying cellular interaction dynamics in 3D fluorescence microscopy data

scientific article

Remodeling of central metabolism in invasive breast cancer compared to normal breast tissue - a GC-TOFMS based metabolomics study

scientific article

Reply to Fujino et al ⬇️

scientific article published on November 29, 2012

Reversion-inducing cysteine-rich protein with Kazal motif (RECK) expression: an independent prognostic marker of survival in colorectal cancer ⬇️

scientific article published on March 6, 2012

Robust Anti-viral Immunity Requires Multiple Distinct T Cell-Dendritic Cell Interactions

scientific article

SAP-controlled T-B cell interactions underlie germinal centre formation

scientific article published on October 2008

Standardized evaluation of tumor-infiltrating lymphocytes in breast cancer: results of the ring studies of the international immuno-oncology biomarker working group

scientific article published on July 2016

Strategies for developing Ki67 as a useful biomarker in breast cancer

scientific article published on 14 August 2015

Streptococcus pneumoniae-induced regulation of cyclooxygenase-2 in human lung tissue ⬇️

scientific article published on March 22, 2012

T-cell-receptor-dependent signal intensity dominantly controls CD4(+) T cell polarization In Vivo

scientific article

Targeted ultra-deep sequencing reveals recurrent and mutually exclusive mutations of cancer genes in blastic plasmacytoid dendritic cell neoplasm

scientific article

The combinatorial complexity of cancer precision medicine

scientific article

The landscape of metastatic progression patterns across major human cancers

scientific article

Tubular, lactating, and ductal adenomas are devoid of MED12 Exon2 mutations, and ductal adenomas show recurrent mutations in GNAS and the PI3K-AKT pathway

scientific article published on 20 July 2016

Type 1 conventional dendritic cells maintain and guide the differentiation of precursors of exhausted T cells in distinct cellular niches

scientific article published in 2022

Unmasked: when a clinically malignant disease turns out infectious. A rare case of tularemia

scientific article published on 06 June 2012

Visceral leishmaniasis in a patient with AIDS: early pathological diagnosis using conventional histology, PCR and electron microscopy is the key for adequate treatment ⬇️

scientific article published on February 16, 2012

Who is at risk for diagnostic discrepancies? Comparison of pre- and postmortal diagnoses in 1800 patients of 3 medical decades in East and West Berlin

scientific article

Would Virchow be a systems biologist? A discourse on the philosophy of science with implications for pathological research

scientific article

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