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List of works by Marina Bibikova

A comprehensive microarray-based DNA methylation study of 367 hematological neoplasms

scientific article

A methyl-deviator epigenotype of estrogen receptor-positive breast carcinoma is associated with malignant biology

scientific article

A versatile assay for high-throughput gene expression profiling on universal array matrices

scientific article

APOBEC3B upregulation and genomic mutation patterns in serous ovarian carcinoma.

scientific article published on 23 October 2013

Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery

scientific article

Application of a low cost array-based technique - TAB-Array - for quantifying and mapping both 5mC and 5hmC at single base resolution in human pluripotent stem cells

scientific article

Array-based DNA methylation profiling of primary lymphomas of the central nervous system

scientific article

DNA methylation and gene expression differences in children conceived in vitro or in vivo

scientific article published on 15 July 2009

DNA methylation profiles in African American prostate cancer patients in relation to disease progression

scientific article

Differences in DNA methylation between human neuronal and glial cells are concentrated in enhancers and non-CpG sites

scientific article

Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression

scientific article

Efficient gene targeting in Drosophila with zinc-finger nucleases

scientific article

Enhancing Gene Targeting with Designed Zinc Finger Nucleases ⬇️

scientific article (publication date: 2 May 2003)

Epigenetic signature of Gleason score and prostate cancer recurrence after radical prostatectomy

scientific article

Epigenome-Wide Tumor DNA Methylation Profiling Identifies Novel Prognostic Biomarkers of Metastatic-Lethal Progression in Men Diagnosed with Clinically Localized Prostate Cancer

scientific article published on 29 June 2016

Epigenome-wide ovarian cancer analysis identifies a methylation profile differentiating clear-cell histology with epigenetic silencing of the HERG K+ channel

scientific article published on 09 April 2013

Epigenomic profiling of DNA methylation in paired prostate cancer versus adjacent benign tissue

scientific article published on 18 September 2015

Epigenomic profiling of prostate cancer identifies differentially methylated genes in TMPRSS2:ERG fusion-positive versus fusion-negative tumors

scientific article

Expression of an active tobacco mitogen-activated protein kinase kinase kinase enhances freezing tolerance in transgenic maize

scholarly article

Functional analysis of human microtubule-based motor proteins, the kinesins and dyneins, in mitosis/cytokinesis using RNA interference

scientific article

Gene expression panel predicts metastatic-lethal prostate cancer outcomes in men diagnosed with clinically localized prostate cancer

scientific article published on 19 October 2016

Gene expression signature of Gleason score is associated with prostate cancer outcomes in a radical prostatectomy cohort

scientific article published on 26 April 2017

Genome-Wide Dna Methylation Profiling Using Infinium ® Assay ⬇️

scientific article published on October 1, 2009

Genome-wide methylation profiles reveal quantitative views of human aging rates

scientific article

Genome‐wide DNA methylation profiling ⬇️

scientific article published on March 1, 2010

Genomic profiling of 766 cancer-related genes in archived esophageal normal and carcinoma tissues

scientific article published on May 2008

High-throughput DNA methylation profiling using universal bead arrays

scientific article

High-throughput SNP genotyping on universal bead arrays

scientific article

Highly parallel genome-wide expression analysis of single mammalian cells

scientific article (publication date: 2012)

Human embryonic stem cells have a unique epigenetic signature

scientific article

Identification and functional relevance of de novo DNA methylation in cancerous B-cell populations

scientific article

Illumina universal bead arrays

scientific article published on January 2006

Large-scale profiling of archival lymph nodes reveals pervasive remodeling of the follicular lymphoma methylome

scientific article published on 20 January 2009

New insights into the biology and origin of mature aggressive B-cell lymphomas by combined epigenomic, genomic, and transcriptional profiling

scientific article

Prostate tumor DNA methylation is associated with cigarette smoking and adverse prostate cancer outcomes

scientific article published on 03 May 2016

Quantitative gene expression profiling in formalin-fixed, paraffin-embedded tissues using universal bead arrays

scientific article

Substantial DNA methylation differences between two major neuronal subtypes in human brain

scientific article published on 26 November 2015

Succinate dehydrogenase mutation underlies global epigenomic divergence in gastrointestinal stromal tumor

scientific article

TP53 mutations, tetraploidy and homologous recombination repair defects in early stage high-grade serous ovarian cancer

scientific article

Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases

scientific article

Targeted or whole genome sequencing of formalin fixed tissue samples: potential applications in cancer genomics

scientific article published on 31 July 2015

Tumor hypomethylation at 6p21.3 associates with longer time to recurrence of high-grade serous epithelial ovarian cancer

scientific article (publication date: June 2014)

Two-dimensional transcriptome profiling: identification of messenger RNA isoform signatures in prostate cancer from archived paraffin-embedded cancer specimens

scientific article

Unraveling epigenetic regulation in embryonic stem cells

scientific article published on February 2008

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome

scientific article published on June 2011

Validation study of genes with hypermethylated promoter regions associated with prostate cancer recurrence.

scientific article

Whole-genome haplotyping by dilution, amplification, and sequencing

scientific article

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