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List of works by Jens Stougaard

5' Analysis of the soybean leghaemoglobin lbc(3) gene: regulatory elements required for promoter activity and organ specificity

scientific article published on December 1987

A combination of chitooligosaccharide and lipochitooligosaccharide recognition promotes arbuscular mycorrhizal associations in Medicago truncatula

scientific article published on 06 November 2019

A conditional negative selection for Arabidopsis expressing a bacterial cytosine deaminase gene.

scientific article published in June 1995

A gain-of-function mutation in a cytokinin receptor triggers spontaneous root nodule organogenesis.

scientific article

A general pipeline for the development of anchor markers for comparative genomics in plants

scientific article

A genetic linkage map of the model legume Lotus japonicus and strategies for fast mapping of new loci

scientific article

A genetic screen for plant mutants with altered nodulation phenotypes in response to rhizobial glycan mutants

article

A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis.

scientific article

A plant receptor-like kinase required for both bacterial and fungal symbiosis.

scientific article

A receptor kinase gene of the LysM type is involved in legume perception of rhizobial signals

scientific article published on October 2003

A set of Lotus japonicus Gifu x Lotus burttii recombinant inbred lines facilitates map-based cloning and QTL mapping

scientific article

A two-component nodule-specific enhancer in the soybean N23 gene promoter

scientific article published in 1991

Activation of an Endogenous Retrotransposon Associated with Epigenetic Changes in : A Tool for Functional Genomics in Legumes

Agrobacterium rhizogenes as a vector for transforming higher plants. Application in Lotus corniculatus transformation

scientific article published on January 1995

Agrobacterium rhizogenes pRi TL-DNA integration system: a gene vector for Lotus japonicus transformation

article

An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes.

scientific article

An in silico strategy towards the development of legume genome anchor markers using comparative sequence analysis

An intermolecular binding mechanism involving multiple LysM domains mediates carbohydrate recognition by an endopeptidase.

scientific article

An unusual intrinsically disordered protein from the model legume Lotus japonicus stabilizes proteins in vitro

scientific article published on 8 September 2008

Analysis of promoter activity of the early nodulin Enod40 in Lotus japonicus

scientific article

Atypical Receptor Kinase RINRK1 Required for Rhizobial Infection But Not Nodule Development in Lotus japonicus

scientific article published on 13 August 2019

Author Correction: Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88

scientific article published in Nature Communications

Autophosphorylation is essential for the in vivo function of the Lotus japonicus Nod factor receptor 1 and receptor-mediated signalling in cooperation with Nod factor receptor 5.

scientific article

Auxin distribution in Lotus japonicus during root nodule development

scientific article published in August 2003

Barley disease resistance gene analogs of the NBS-LRR class: identification and mapping

scientific article published on 5 March 2003

CERBERUS, a novel U-box protein containing WD-40 repeats, is required for formation of the infection thread and nodule development in the legume-Rhizobium symbiosis.

scientific article published on 5 June 2009

CYTOKININ OXIDASE/DEHYDROGENASE3 Maintains Cytokinin Homeostasis during Root and Nodule Development in Lotus japonicus.

scientific article

Characterizing standard genetic parts and establishing common principles for engineering legume and cereal roots

scientific article published on 23 May 2019

Chemically synthesized 58-mer LysM domain binds lipochitin oligosaccharide

scientific article published on 26 August 2014

Chromosomal map of the model legume Lotus japonicus.

scientific article published on August 2002

Chromosomal regions associated with thein vitroculture response of wheat (Triticum aestivumL.) microspores

Combined N-glycome and N-glycoproteome analysis of the Lotus japonicus seed globulin fraction shows conservation of protein structure and glycosylation in legumes

scientific article

Common and not so common symbiotic entry

Comparative sequence analysis of cis elements present in Glycine max L. leghemoglobin lba and lbc3 genes

scientific article

Conditional requirement for exopolysaccharide in the Mesorhizobium-Lotus symbiosis.

scientific article published in March 2013

Conserved regulation of the soybean early nodulin ENOD2 gene promoter in determine and indeterminate transgenic root nodules

scientific article published in March 1993

Construction of a Genetic Linkage Map of the Model Legume Lotus japonicus Using an Intraspecific F2 Population

scientific article published on 01 December 2001

Cooperative binding of LysM domains determines the carbohydrate affinity of a bacterial endopeptidase protein

scientific article published on 13 January 2014

Crystal structure of the TLDc domain of oxidation resistance protein 2 from zebrafish

scientific article

Cytokinin Biosynthesis Promotes Cortical Cell Responses during Nodule Development.

scientific article published on 21 July 2017

Cytokinin induction of root nodule primordia in Lotus japonicus is regulated by a mechanism operating in the root cortex

scientific article

Deregulation of a Ca2+/calmodulin-dependent kinase leads to spontaneous nodule development.

scientific article published in June 2006

Derepression of the plant Chromovirus LORE1 induces germline transposition in regenerated plants.

scientific article

Different Pathways Act Downstream of the CEP Peptide Receptor CRA2 to Regulate Lateral Root and Nodule Development

scientific article published on 24 June 2016

Differential regulation of the Epr3 receptor coordinates membrane-restricted rhizobial colonization of root nodule primordia.

scientific article published on 23 February 2017

Dissection of symbiosis and organ development by integrated transcriptome analysis of lotus japonicus mutant and wild-type plants.

scientific article

Distinct Transcriptomic Responses to a Spectrum of Bacteria Ranging From Symbiotic to Pathogenic

article

Distinct roles of Lotus japonicus SYMRK and SYM15 in root colonization and arbuscule formation

scientific article published in 2004

Distinct signaling routes mediate intercellular and intracellular rhizobial infection in Lotus japonicus

scientific article published on 01 April 2021

Ds gene-tagging

article

Dual requirement of the LjSym4 gene for mycorrhizal development in epidermal and cortical cells of Lotus japonicus roots

scientific article published in 2002

Dynamics of Lotus japonicus ethylene production in response to compatible Nod factor

scientific article published on 29 November 2017

Epidermal LysM receptor ensures robust symbiotic signalling in Lotus japonicus.

scientific article published on 29 June 2018

Epidermal auxin biosynthesis facilitates rhizobial infection in Lotus japonicus.

scientific article

Evolution and Regulation of theLotus japonicus LysM ReceptorGene Family

article

Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus japonicus

scientific article

Expression of a complete soybean leghemoglobin gene in root nodules of transgenic Lotus corniculatus.

scientific article

Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan

scientific article published on 14 January 2020

Five phosphonate operon gene products as components of a multi-subunit complex of the carbon-phosphorus lyase pathway

scientific article

Fusions between green fluorescent protein and beta-glucuronidase as sensitive and vital bifunctional reporters in plants

scientific article published on 01 July 1998

Fusions between green fluorescent protein and beta-glucuronidase as sensitive and vital bifunctional reporters in plants.

scientific article

GeMprospector--online design of cross-species genetic marker candidates in legumes and grasses

scientific article

Gene targeting approaches using positive-negative selection and large flanking regions

scientific article published in November 1997

Genetic Suppressors of the Lotus japonicus har1-1 Hypernodulation Phenotype

Genetic diversity and population structure analysis of European hexaploid bread wheat (Triticum aestivum L.) varieties

scientific article

Genetic nomenclature guidelines for the model legume Lotus japonicus

scientific article published in August 1999

Genetics of Symbiosis in Lotus japonicus: Recombinant Inbred Lines, Comparative Genetic Maps, and Map Position of 35 Symbiotic Loci

article

Genome-wide LORE1 retrotransposon mutagenesis and high-throughput insertion detection in Lotus japonicus.

scientific article

Hairy roots - a short cut to transgenic root nodules

scientific article published in May 1989

Hemoglobin LjGlb1-1 is involved in nodulation and regulates the level of nitric oxide in the Lotus japonicus-Mesorhizobium loti symbiosis

scientific article published on 21 July 2016

High levels of genetic and genotypic diversity in field populations of the barley pathogen Ramularia collo-cygni

High-resolution genetic maps of Lotus japonicus and L. burttii based on re-sequencing of recombinant inbred lines.

scientific article published on 03 July 2016

High-throughput and targeted genotyping of Lotus japonicus LORE1 insertion mutants

scientific article published in January 2013

Improved characterization of nod factors and genetically based variation in LysM Receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.

scientific article

Information transfer: mapping and cloning in other legumes

Inoculation insensitive promoters for cell type enriched gene expression in legume roots and nodules

scientific article

Interdependence and nodule specificity of cis-acting regulatory elements in the soybean leghemoglobin lbc 3 and N23 gene promoters

article

Interplay of flg22-induced defence responses and nodulation in Lotus japonicus

scientific article published on 20 September 2011

Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88

scientific article published in Nature Communications

Intraradical colonization by arbuscular mycorrhizal fungi triggers induction of a lipochitooligosaccharide receptor

scientific article

Iron and ferritin accumulate in separate cellular locations in Phaseolus seeds

scientific article

Keeping track of the growing number of biological functions of chitin and its interaction partners in biomedical research

scientific article

LORE1, an active low-copy-number TY3-gypsy retrotransposon family in the model legume Lotus japonicus

scientific article

LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus

scientific article published on 24 November 2017

Legume LysM receptors mediate symbiotic and pathogenic signalling

scientific article published on 5 August 2017

Legume anchor markers link syntenic regions between Phaseolus vulgaris, Lotus japonicus, Medicago truncatula and Arachis

scientific article published on 9 August 2008

Legume receptors perceive the rhizobial lipochitin oligosaccharide signal molecules by direct binding.

scientific article

Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity

scientific article published on 01 August 2020

Lipochitin oligosaccharides immobilized through oximes in glycan microarrays bind LysM proteins

scientific article published on 16 January 2014

Localisation of genes for resistance against Blumeria graminis f.sp. hordei and Puccinia graminis in a cross between a barley cultivar and a wild barley (Hordeum vulgare ssp. spontaneum) line

scientific article published on 14 November 2002

Lotus Base: An integrated information portal for the model legume Lotus japonicus

scientific article published on 23 December 2016

Lotus burttii Takes a Position of the Third Corner in the Lotus Molecular Genetics Triangle

article

Lotus genome: pod of gold for legume research

scientific article

Lotus japonicus ARPC1 is required for rhizobial infection

scientific article published on 3 August 2012

Lotus japonicus Nuclear Factor YA1, a nodule emergence stage-specific regulator of auxin signalling

scientific article published on 26 September 2020

Lotus japonicus SUNERGOS1 encodes a predicted subunit A of a DNA topoisomerase VI that is required for nodule differentiation and accommodation of rhizobial infection

scientific article

Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics

article

Lotus japonicus: legume research in the fast lane

scientific article

Lotus japonicus’s a model system

LysM domains mediate lipochitin-oligosaccharide recognition and Nfr genes extend the symbiotic host range.

scientific article

Mapping and map-based cloning

scholarly article

Mesoamerican origin of the common bean (Phaseolus vulgaris L.) is revealed by sequence data

scientific article

Micro-PIXE investigation of bean seeds to assist micronutrient biofortification

scientific article published in October 2011

Minimal enhancer elements of the leghemoglobinlba andlbc3 gene promoters fromGlycine max L. have different properties

article

Mycorrhiza Mutants of Lotus japonicus Define Genetically Independent Steps During Symbiotic Infection

N-glycan maturation mutants in Lotus japonicus for basic and applied glycoprotein research

scientific article published on 13 April 2017

Nanobody-driven signaling reveals the core receptor complex in root nodule symbiosis

scientific article published on 20 January 2023

Naturally occurring diversity helps to reveal genes of adaptive importance in legumes

scientific article

Negative regulation of CCaMK is essential for symbiotic infection.

scientific article

Nodulation gene mutants of Mesorhizobium loti R7A-nodZ and nolL mutants have host-specific phenotypes on Lotus spp.

scientific article

Organization and expression of genes in the genomic region surrounding the glutamine synthetase gene Gln1 from Lotus japonicus

article

Phosphorylation of the alpha-I motif in SYMRK drives root nodule organogenesis

scientific article published in 2024

Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases.

scientific article published on October 2003

Preparation of glycoconjugates from unprotected carbohydrates for protein-binding studies

scientific article

PriFi: using a multiple alignment of related sequences to find primers for amplification of homologs

scientific article

Proliferating Floral Organs (Pfo), a Lotus japonicus gene required for specifying floral meristem determinacy and organ identity, encodes an F-box protein

scientific article

Proteome analysis of pod and seed development in the model legume Lotus japonicus

scientific article published on 29 September 2010

Proteome reference maps of the Lotus japonicus nodule and root

scientific article published on 6 January 2014

Rearrangement of actin cytoskeleton mediates invasion of Lotus japonicus roots by Mesorhizobium loti ⬇️

scientific article

Receptor-mediated chitin perception in legume roots is functionally separable from Nod factor perception.

scientific article

Receptor-mediated exopolysaccharide perception controls bacterial infection.

scientific article

Regulation of Nod factor biosynthesis by alternative NodD proteins at distinct stages of symbiosis provides additional compatibility scrutiny

scientific article published in December 2017

Regulation of nitrogenase synthesis in histidine auxotrophs of Klebsiella pneumoniae with altered levels of adenylate nucleotides

scientific article

Regulators and regulation of legume root nodule development.

scientific article

Root nodulation: a paradigm for how plant-microbe symbiosis influences host developmental pathways

scientific article published on October 2011

Root nodule specific gene regulation: analysis of the soybean nodulin N23 gene promoter in heterologous symbiotic systems.

scientific article published on January 1988

SNOWY COTYLEDON 2 Promotes Chloroplast Development and Has a Role in Leaf Variegation in Both Lotus japonicus and Arabidopsis thaliana.

scientific article published on 9 March 2017

Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis.

scientific article published on 24 June 2005

Shoot control of root development and nodulation is mediated by a receptor-like kinase.

scientific article published on 6 November 2002

Short root mutant of Lotus japonicus with a dramatically altered symbiotic phenotype.

scientific article published in July 2000

Sinorhizobium fredii HH103 Invades Lotus burttii by Crack Entry in a Nod Factor-and Surface Polysaccharide-Dependent Manner.

scientific article published on 9 November 2016

Sinorhizobium fredii HH103 nolR and nodD2 mutants gain capacity for infection thread invasion of Lotus japonicus Gifu and Lotus burttii

scientific article published on 20 March 2019

Site-directed mutagenesis of the organ-specific element in the soybean leghemoglobin Ibc3 gene promoter

article

Spatial and temporal expression patterns of chitinase genes in developing zebrafish embryos.

scientific article published on 11 January 2014

Spontaneous root-nodule formation in the model legume Lotus japonicus: a novel class of mutants nodulates in the absence of rhizobia

scientific article published on April 2006

Standards for plant synthetic biology: a common syntax for exchange of DNA parts.

scientific article

Structural signatures in EPR3 define a unique class of plant carbohydrate receptors

scientific article published on 30 July 2020

Structures of Exopolysaccharides Involved in Receptor-mediated Perception of Mesorhizobium loti by Lotus japonicus.

scientific article

Structures of exopolysaccharides involved in receptor-mediated perception of Mesorhizobium loti by Lotus japonicas.

scientific article published in April 2018

Substrate-dependent negative selection in plants using a bacterial cytosine deaminase gene

article

Symbiotic mutants deficient in nodule establishment identified after T-DNA transformation of Lotus japonicus.

scientific article published in September 1998

Systemic control of legume susceptibility to rhizobial infection by a mobile microRNA

scientific article

The Clavata2 genes of pea and Lotus japonicus affect autoregulation of nodulation.

scientific article published on 31 January 2011

The Ethylene Responsive Factor Required for Nodulation 1 (ERN1) Transcription Factor Is Required for Infection-Thread Formation in Lotus japonicus

scientific article published on 9 January 2017

The K+-dependent asparaginase, NSE1, is crucial for plant growth and seed production in Lotus japonicus

scientific article

The LORE1 insertion mutant resource.

scientific article published on 20 June 2016

The Sym35 gene required for root nodule development in pea is an ortholog of Nin from Lotus japonicus

scientific article published in March 2003

The deubiquitinating enzyme AMSH1 is required for rhizobial infection and nodule organogenesis in Lotus japonicus

scientific article

The embryonic expression patterns of zebrafish genes encoding LysM-domains.

scientific article

The integral membrane protein SEN1 is required for symbiotic nitrogen fixation in Lotus japonicus nodules

scientific article published on 28 November 2011

The maize transposable element Ac is mobile in the legume Lotus japonicus.

scientific article published in March 1995

The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus

scientific article

The pea Sym37 receptor kinase gene controls infection-thread initiation and nodule development

scientific article

The proteome of seed development in the model legume Lotus japonicus.

scientific article

The sulfate transporter SST1 is crucial for symbiotic nitrogen fixation in Lotus japonicus root nodules

scientific article published in 2005

TheLotus japonicus LjSym4Gene Is Required for the Successful Symbiotic Infection of Root Epidermal Cells

article

Transformation-regeneration procedure for Lotus japonicus

Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus

scientific article

Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus

scientific article

User Guide for the LORE1 Insertion Mutant Resource

scientific article published on 01 January 2017

VC1 catalyses a key step in the biosynthesis of vicine in faba bean

scientific article published on 05 July 2021

Virus-induced gene silencing (VIGS) as a reverse genetic tool to study development of symbiotic root nodules

scientific article published in June 2008

Widespread and transgenerational retrotransposon activation in inter‐ and intraspecies recombinant inbred populations of <i>Lotus japonicus</i>

scientific article published on 30 July 2022

[Regulatory genes of garden pea (Pisum sativum L.) controlling the development of nitrogen-fixing nodules and arbuscular mycorrhiza: a review of basic and applied aspects]

scientific article published on 01 May 2007

micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules.

scientific article published on 13 May 2015

shortran: a pipeline for small RNA-seq data analysis

scientific article

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