List of works by Stephen R. Pennington

2-D DIGE as a quantitative tool for investigating the HUPO Brain Proteome Project mouse series.

scientific article published in September 2006

2-D protein gel electrophoresis: an old method with future potential

scientific article published on December 1994

A clinically based protein discovery strategy to identify potential biomarkers of response to anti-TNF-α treatment of psoriatic arthritis

scientific article published on 24 June 2015

A high-stringency blueprint of the human proteome

scientific article published on 16 October 2020

A method for the rapid depletion of albumin and immunoglobulin from human plasma.

scientific article

Absolute Quantification of Toxicological Biomarkers via Mass Spectrometry

scientific article

Absolute quantification of toxicological biomarkers by multiple reaction monitoring.

scientific article published in January 2011

Aluminum stimulated c-fos gene expression in Swiss 3T3 fibroblasts.

scientific article published on November 1993

Analysis of growth factor stimulated nucleocytoplasmic protein transport using two-dimensional gel electrophoresis

scientific article published on July 1995

Analysis of transcription factor activation in Swiss 3T3 fibroblasts.

scientific article published on November 1993

Application of a discovery to targeted LC-MS proteomics approach to identify deregulated proteins associated with idiosyncratic liver toxicity in a rat model of LPS/diclofenac co-administration

scientific article published on 13 March 2015

Application of laser capture microdissection combined with two-dimensional electrophoresis for the discovery of differentially regulated proteins in pancreatic ductal adenocarcinoma

scientific article

Application of proteomic strategies to the identification of urinary biomarkers for prostate cancer: a review.

scientific article published on September 2006

Bayesian Additive Regression Trees using Bayesian Model Averaging

scientific article published on 27 July 2017

Bayesian methods for proteomic biomarker development

article

Biomarkers in rheumatology, now and in the future

scientific article published on 16 December 2011

Breast cancer proteomics: clinical perspectives.

scientific article published on February 2007

Bridging Proteomics and Medical Science - the 5th HUPO Brain Proteome Workshop in Dublin, Ireland

scientific article published in May 2006

Cell cycle-dependent morphological changes in the actin cytoskeleton induced by agents which elevate cyclic AMP.

scientific article published on September 1995

Cell shape-dependent Control of Ca2+ influx and cell cycle progression in Swiss 3T3 fibroblasts

scientific article published on 21 August 2007

Changes in nuclear protein composition in response to chronic electrical stimulation of skeletal muscle

scientific article published on 01 May 1997

Changes in p21(Cip1) and p27(Kip1) expression are not required for cell cycle entry and progression to S phase in Swiss 3T3 cells

scientific article published on October 2000

Clinical translation of MS-based, quantitative plasma proteomics: status, challenges, requirements, and potential

scientific article published on 24 June 2016

Comparative analysis of synovial fluid and plasma proteomes in juvenile arthritis--proteomic patterns of joint inflammation in early stage disease.

scientific article

Comparison of different methods for the solubilisation of Neospora caninum (Phylum Apicomplexa) antigen

scientific article

CyDye immunoblotting for proteomics: co-detection of specific immunoreactive and total protein profiles

scientific article

Developing clinically relevant biomarkers in inflammatory arthritis: A multiplatform approach for serum candidate protein discovery

scientific article published on 2 September 2015

Development of a label-free LC-MS/MS strategy to approach the identification of candidate protein biomarkers of disease recurrence in prostate cancer patients in a clinical trial of combined hormone and radiation therapy

scientific article published in June 2013

Development of a pharmaceutical hepatotoxicity biomarker panel using a discovery to targeted proteomics approach.

scientific article

Differential proteomics incorporating iTRAQ labeling and multi-dimensional separations.

scientific article

Discovery and Longitudinal Evaluation of Candidate Protein Biomarkers for Disease Recurrence in Prostate Cancer

scientific article

Discovery and confirmation of a protein biomarker panel with potential to predict response to biological therapy in psoriatic arthritis

scientific article published on 3 September 2014

Early biomarkers of joint damage in rheumatoid and psoriatic arthritis

scientific article

EuPA achieves visibility - an activity report on the first three years.

scientific article published on 8 April 2008

G proteins and diabetes

scientific article published in Nature

GTP gamma S activation of proto-oncogene expression in transiently permeabilised Swiss 3T3 fibroblasts

scientific article published on January 1988

GTP gamma S inhibits early c-myc protein accumulation but not DNA synthesis in Swiss 3T3 fibroblasts

scientific article published on October 1990

Growth factor stimulated translocation of proteins into the nucleus in Swiss 3T3 fibroblasts.

scientific article published on November 1993

Guidelines for the next 10 years of proteomics

scientific article published on January 2006

HUPO Brain Proteome Project: summary of the pilot phase and introduction of a comprehensive data reprocessing strategy

scientific article

Identification of Ca2+-dependent binding partners for the neuronal calcium sensor protein neurocalcin δ: interaction with actin, clathrin and tubulin

scientific article (publication date: May 2002)

Identification of Differentially Expressed Proteins from Smokeless Tobacco Addicted Patients Suffering from Oral Squamous Cell Carcinoma

scientific article published on 24 August 2019

In vitro nuclear interactome of the HIV-1 Tat protein

scientific article

Inhibition of mitogen-induced DNA synthesis by bafilomycin A1 in Swiss 3T3 fibroblasts.

scientific article published on January 1996

Integrating biomarkers across omic platforms: an approach to improve stratification of patients with indolent and aggressive prostate cancer

scientific article published on 07 August 2018

Interaction of developmental transcription factor HOXC11 with steroid receptor coactivator SRC-1 mediates resistance to endocrine therapy in breast cancer [corrected].

scientific article published on 9 February 2010

Mastoparan causes cell permeabilisation and delayed activation of DNA synthesis in Swiss 3T3 fibroblasts

scientific article published on November 1996

Mastoparan transiently permeabilizes Swiss 3T3 cells and induces c-fos proto-oncogene expression. Role of calcium and G protein activation

scientific article published on April 2000

Measurement of intracellular Ca2+ in single aequorin-injected and suspensions of fura-2-loaded ROS 17/2.8 cells and normal human osteoblasts. Effect of parathyroid hormone.

scientific article published on February 1991

Molecular basis of cell–biomaterial interaction: Insights gained from transcriptomic and proteomic studies

article

Molecular signature characterisation of different inflammatory phenotypes of systemic juvenile idiopathic arthritis

scientific article published on 20 April 2019

Moving Toward Precision Medicine in Psoriasis and Psoriatic Arthritis

scientific article published on 01 June 2020

NMR Structure of Hsp12, a Protein Induced by and Required for Dietary Restriction-Induced Lifespan Extension in Yeast

scientific article

New insight into the functions of the interleukin-17 receptor adaptor protein Act1 in psoriatic arthritis.

scientific article published on 31 October 2012

Oral squamous cell carcinoma: Key clinical questions, biomarker discovery, and the role of proteomics.

scientific article

Pathology-Driven Comprehensive Proteomic Profiling of the Prostate Cancer Tumor Microenvironment

scientific article

Potential mechanisms of calcium dependent regulation of the mammalian cell cycle revealed by comprehensive unbiased label-free nLC-MS/MS quantitative proteomics

scientific article

Probing the prostate tumour microenvironment I: impact of glucose deprivation on a cell model of prostate cancer progression.

scientific article published on 12 January 2017

Probing the prostate tumour microenvironment II: Impact of hypoxia on a cell model of prostate cancer progression.

scientific article published on February 2017

Proceedings of the 2018 GRAPPA Collaborative Research Network Meeting

scientific article published on 1 June 2019

Proceedings of the 2019 GRAPPA Collaborative Research Network Meeting

scientific article published on 01 June 2020

Proceedings of the 2021 GRAPPA-Collaborative Research Network (CRN) Meeting

scientific article published on 01 April 2022

Profiling the tumor microenvironment proteome in prostate cancer using laser capture microdissection coupled to LC⿿MS⿿A technical report.

scientific article published on 29 December 2015

Protein and peptides in pictures: imaging with MALDI mass spectrometry

scientific article

Protein expression profiling of glutathione S-transferase pi null mice as a strategy to identify potential markers of resistance to paracetamol-induced toxicity in the liver

scientific article published in February 2003

Protein-Protein Interaction Detection Via Mass Spectrometry-Based Proteomics

scientific article published on January 2016

Proteome analysis: from protein characterization to biological function

scientific article published in April 1997

Proteomes, Their Compositions and Their Sources

scientific article published in January 2016

Proteomics in Chronic Arthritis-Will We Finally Have Useful Biomarkers?

scientific article published on 14 July 2018

Psoriatic arthritis under a proteomic spotlight: application of novel technologies to advance diagnosis and management

scientific article published on May 2015

Relative and absolute quantitative expression profiling of cytochromes P450 using isotope-coded affinity tags

scientific article published on 01 March 2006

Revolutionizing Precision Oncology through Collaborative Proteogenomics and Data Sharing.

scientific article

Role of proteomics in the investigation of pulmonary fibrosis.

scientific article published on June 2007

Sequence tagging reveals unexpected modifications in toxicoproteomics

scientific article published on 7 January 2011

Stratification and monitoring of juvenile idiopathic arthritis patients by synovial proteome analysis

scientific article

Surface-induced changes in protein adsorption and implications for cellular phenotypic responses to surface interaction

scientific article published on 7 February 2006

Synovial membrane protein expression differs between juvenile idiopathic arthritis subtypes in early disease

scientific article published on 13 January 2014

Temporal proteomic profile of memory consolidation in the rat hippocampal dentate gyrus

scientific article published on 17 October 2011

The MyD88+ phenotype is an adverse prognostic factor in epithelial ovarian cancer

scientific article

The Role of Proteomics in Biomarker Development for Improved Patient Diagnosis and Clinical Decision Making in Prostate Cancer

scientific article published in 2016

The microtubule-targeting agents, PBOX-6 [pyrrolobenzoxazepine 7-[(dimethylcarbamoyl)oxy]-6-(2-naphthyl)pyrrolo-[2,1-d] (1,5)-benzoxazepine] and paclitaxel, induce nucleocytoplasmic redistribution of the peptidyl-prolyl isomerases, cyclophilin A and

scientific article published on 8 January 2009

The topoisomerase II-Hsp90 complex: a new chemotherapeutic target?

scientific article

Urinary markers for prostate cancer.

scientific article published on December 2006

Use of SELDI MS to discover and identify potential biomarkers of toxicity in InnoMed PredTox: a multi-site, multi-compound study

scientific article

Use of proteomics for the discovery of early markers of drug toxicity

article

Use of proteomics for the discovery of early markers of drug toxicity.

scientific article

Vitamin D binding protein isoforms as candidate predictors of disease extension in childhood arthritis.

scientific article

Why have so few proteomic biomarkers "survived" validation? (Sample size and independent validation considerations).

scientific article published on 16 May 2014

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