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List of works by Claus Lindbjerg Andersen

3'-UTR poly(T/U) repeat of EWSR1 is altered in microsatellite unstable colorectal cancer with nearly perfect sensitivity.

scientific article published in May 2015

A DERL3-associated defect in the degradation of SLC2A1 mediates the Warburg effect

scientific article (publication date: 3 April 2014)

A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays

scientific article

A beta-mixture model for dimensionality reduction, sample classification and analysis

scientific article

A dual program for translation regulation in cellular proliferation and differentiation

scientific article published on September 2014

A genetically inducible porcine model of intestinal cancer

scientific article published on 7 September 2017

A narrow deletion of 7q is common to HCL, and SMZL, but not CLL.

scientific article published on June 2004

Active, but not inactive, human centromeres display topoisomerase II activity in vivo

scientific article published in January 2002

Age-stratified reference intervals unlock the clinical potential of circulating cell-free DNA as a biomarker of poor outcome for healthy individuals and patients with colorectal cancer

scientific article published on 15 December 2020

Alternative splicing in colon, bladder, and prostate cancer identified by exon array analysis

scientific article

Alternative splicing of SLC39A14 in colorectal cancer is regulated by the Wnt pathway

scientific article published on 11 October 2010

An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes

scientific article

Analysis of Plasma Cell-Free DNA by Ultradeep Sequencing in Patients With Stages I to III Colorectal Cancer

scientific article published on 09 May 2019

Analysis of circulating tumour DNA to monitor disease burden following colorectal cancer surgery.

scientific article published on 4 February 2015

Are CIMP and chr16p13.2 copy-number status independent prognostic markers in Stages II and III colorectal cancer?

scientific article published on 25 April 2011

Are microRNAs located in genomic regions associated with cancer?

scientific article published on 26 September 2006

Blockage of receptor for advanced glycation end products prevents development of cardiac dysfunction in db/db type 2 diabetic mice.

scientific article

Characterization of genetic intratumor heterogeneity in colorectal cancer and matching patient-derived spheroid cultures

scientific article

Characterization of three hairy cell leukemia- derived cell lines (ESKOL, JOK-1, and hair-M) by multiplex-FISH, comparative genomic hybridization, FISH, PRINS, and dideoxyPRINS.

scientific article published on January 2000

Circulating U2 small nuclear RNA fragments as a novel diagnostic biomarker for pancreatic and colorectal adenocarcinoma

scientific article published on 14 September 2012

Clinical Implications of Monitoring Circulating Tumor DNA in Patients with Colorectal Cancer

scientific article

Clusterin expression can be modulated by changes in TCF1-mediated Wnt signaling ⬇️

scientific article

Clusterin expression in normal mucosa and colorectal cancer

scientific article

Comparative analysis of 12 different kits for bisulfite conversion of circulating cell-free DNA.

scientific article published on 30 May 2017

Contribution of allelic imbalance to colorectal cancer

scientific article published in Nature Communications

Correlation between early dynamics in circulating tumour DNA and outcome from FOLFIRI treatment in metastatic colorectal cancer

scientific article published on 08 August 2019

CpG islands detected by self-primed in situ labeling (SPRINS).

scientific article published on September 1998

DAPK1 loss triggers tumor invasion in colorectal tumor cells

scientific article published on 26 November 2019

DNA Microarrays and Genetic Testing

DNA copy-number alterations underlie gene expression differences between microsatellite stable and unstable colorectal cancers

scientific article published on December 2008

Determinants of recurrence after intended curative resection for colorectal cancer

scientific article

Diagnostic and prognostic microRNAs in stage II colon cancer.

scientific article

Direct detection of early-stage cancers using circulating tumor DNA.

scientific article published in August 2017

Dynamics of human DNA topoisomerases IIalpha and IIbeta in living cells

scientific article

Early Detection of Metastatic Relapse and Monitoring of Therapeutic Efficacy by Ultra-Deep Sequencing of Plasma Cell-Free DNA in Patients With Urothelial Bladder Carcinoma

scientific article published on 06 May 2019

Elevated microRNA-126 is associated with high vascular endothelial growth factor receptor 2 expression levels and high microvessel density in colorectal cancer.

scientific article

Establishment and characterization of models of chemotherapy resistance in colorectal cancer: Towards a predictive signature of chemoresistance

scientific article

Evaluation of two commercial global miRNA expression profiling platforms for detection of less abundant miRNAs

scientific article

Frequent genomic loss at chr16p13.2 is associated with poor prognosis in colorectal cancer

scientific article published on 11 March 2011

Frequent occurrence of uniparental disomy in colorectal cancer

scientific article published on 13 June 2006

Functional characterization of rare missense mutations in MLH1 and MSH2 identified in Danish colorectal cancer patients.

scientific article published on 21 August 2009

Functional screening identifies miRNAs influencing apoptosis and proliferation in colorectal cancer

scientific article

Gel-Based Proteomics of Clinical Samples Identifies Potential Serological Biomarkers for Early Detection of Colorectal Cancer

scientific article published on 02 December 2019

Gene expression signatures for colorectal cancer microsatellite status and HNPCC.

scientific article published in June 2005

Genome-wide analysis of allelic imbalance in prostate cancer using the Affymetrix 50K SNP mapping array

scientific article published on 23 January 2007

Genome-wide cell-free DNA fragmentation in patients with cancer

scientific article published on 29 May 2019

Genomic profiling of microRNAs in bladder cancer: miR-129 is associated with poor outcome and promotes cell death in vitro

scientific article (publication date: June 2009)

Genotyping and annotation of Affymetrix SNP arrays

scientific article

High expression of microRNA-625-3p is associated with poor response to first-line oxaliplatin based treatment of metastatic colorectal cancer.

scientific article

High-throughput copy number analysis of 17q23 in 3520 tissue specimens by fluorescence in situ hybridization to tissue microarrays

scientific article published on July 2002

IMPROVE-IT2: implementing noninvasive circulating tumor DNA analysis to optimize the operative and postoperative treatment for patients with colorectal cancer - intervention trial 2. Study protocol

scientific article published on 10 January 2020

Identification and validation of highly frequent CpG island hypermethylation in colorectal adenomas and carcinomas

scientific article

Identification of 33 candidate oncogenes by screening for base-specific mutations.

scientific article

Improved procedure for fluorescence in situ hybridization on tissue microarrays.

scientific article

Long-range epigenetic silencing of chromosome 5q31 protocadherins is involved in early and late stages of colorectal tumorigenesis through modulation of oncogenic pathways.

scientific article

Metastasis-Associated Gene Expression Changes Predict Poor Outcomes in Patients with Dukes Stage B and C Colorectal Cancer

scientific article

MethCORR modelling of methylomes from formalin-fixed paraffin-embedded tissue enables characterization and prognostication of colorectal cancer

scientific article published on 24 April 2020

Methods for derivation of LOH and allelic copy numbers using SNP arrays

MiRNA-362-3p induces cell cycle arrest through targeting of E2F1, USF2 and PTPN1 and is associated with recurrence of colorectal cancer

scientific article published on 12 February 2013

Mnk2 alternative splicing modulates the p38-MAPK pathway and impacts Ras-induced transformation

scientific article

Molecular-Subtype-Specific Biomarkers Improve Prediction of Prognosis in Colorectal Cancer

scientific article published on May 2017

Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue

scientific article

Non-CpG island promoter hypomethylation and miR-149 regulate the expression of SRPX2 in colorectal cancer

scientific article published on 21 November 2012

Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets

scientific article (publication date: August 2004)

Novel DNA methylation biomarkers show high sensitivity and specificity for blood-based detection of colorectal cancer-a clinical biomarker discovery and validation study

scientific article published on 14 November 2019

Oncogene-induced senescence is part of the tumorigenesis barrier imposed by DNA damage checkpoints

scientific article (publication date: 30 November 2006)

Performance of the colorectal cancer screening marker Sept9 is influenced by age, diabetes and arthritis: a nested case-control study

scientific article published on 29 October 2015

Publisher Correction: MethCORR modelling of methylomes from formalin-fixed paraffin-embedded tissue enables characterization and prognostication of colorectal cancer

scientific article published on 03 June 2020

Putative cis-regulatory drivers in colorectal cancer

scientific article published on 23 July 2014

Putting a brake on stress signaling: miR-625-3p as a biomarker for choice of therapy in colorectal cancer.

scientific article

Recurrent genomic imbalances in B-cell splenic marginal-zone lymphoma revealed by comparative genomic hybridization

scientific article published on 01 January 2005

Reply

Repression of KIAA1199 attenuates Wnt-signalling and decreases the proliferation of colon cancer cells.

scientific article

Role of activating fibroblast growth factor receptor 3 mutations in the development of bladder tumors

scientific article published in November 2005

Rseg--an R package to optimize segmentation of SNP array data

scientific article

SNHG16 is regulated by the Wnt pathway in colorectal cancer and affects genes involved in lipid metabolism

scientific article published on 26 June 2016

SNHG5 promotes colorectal cancer cell survival by counteracting STAU1-mediated mRNA destabilization

scientific article published on 22 December 2016

SNPTools: a software tool for visualization and analysis of microarray data

scientific article

The DNA damage checkpoint precedes activation of ARF in response to escalating oncogenic stress during tumorigenesis

scientific article published on 12 July 2013

The association between genetic variants in hMLH1 and hMSH2 and the development of sporadic colorectal cancer in the Danish population

scientific article

The monosomy 7 clone in interphase and metaphase cell population: a combined chromosome and primed in situ labeling study

scientific article published in January 1997

The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression

scientific article published on 14 February 2017

The potential role of Alu Y in the development of resistance to SN38 (Irinotecan) or oxaliplatin in colorectal cancer

scientific article published on 22 May 2015

The splicing factor SRSF6 is amplified and is an oncoprotein in lung and colon cancers

scientific article

Transcriptomic and proteomic intra-tumor heterogeneity of colorectal cancer varies depending on tumor location within the colorectum

scientific article published on 17 December 2020

Trisomy 10 Survival: A Literature Review and Presentation of Seven New Cases

scientific article published on 01 June 1998

Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis

scientific article

Validation of computational determination of microsatellite status using whole exome sequencing data from colorectal cancer patients

scientific article published on 21 October 2019

miR-625-3p regulates oxaliplatin resistance by targeting MAP2K6-p38 signalling in human colorectal adenocarcinoma cells

scientific article

miRNA profiling of circulating EpCAM(+) extracellular vesicles: promising biomarkers of colorectal cancer

scientific article published on 29 August 2016

p53-Responsive micrornas 192 and 215 are capable of inducing cell cycle arrest

scientific article

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