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List of works by Shizuka Uchida

A novel long non-coding RNA Myolinc regulates myogenesis through TDP-43 and Filip1.

scientific article published on 3 April 2018

A novel macrophage subtype directs hematopoietic stem cell homing and retention

scientific article published on 01 July 2019

A step closer to improving cardiac homing of adipose-derived mesenchymal stem cells

scientific article published on 21 November 2018

A systems immunology approach identifies the collective impact of 5 miRs in Th2 inflammation.

scientific article published on 7 June 2018

ANGIOGENES: knowledge database for protein-coding and noncoding RNA genes in endothelial cells.

scientific article

Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation

scientific article published on 5 September 2016

Airn Regulates Igf2bp2 Translation in Cardiomyocytes

scientific article published on 26 February 2018

An integrated approach for the systematic identification and characterization of heart-enriched genes with unknown functions

scientific article

Besides Imprinting: Meg3 Regulates Cardiac Remodeling in Cardiac Hypertrophy

scientific article published on 01 August 2017

C-It-Loci: a knowledge database for tissue-enriched loci

scientific article

C-It: a knowledge database for tissue-enriched genes

scientific article published on 13 July 2010

Circular RNAs as diagnostic tool for renal transplant patients with acute rejection

scientific article published on 01 December 2019

Clinical value of non-coding RNAs in cardiovascular, pulmonary, and muscle diseases

scientific article published on 04 September 2019

Collagen type XIX regulates cardiac extracellular matrix structure and ventricular function

scientific article published on 26 March 2022

Computational Detection of Stage-Specific Transcription Factor Clusters during Heart Development.

scientific article

Doublecortin marks a new population of transiently amplifying muscle progenitor cells and is required for myofiber maturation during skeletal muscle regeneration

scientific article published on 01 February 2015

Doublecortin marks a new population of transiently amplifying muscle progenitor cells and is required for myofiber maturation during skeletal muscle regeneration.

scientific article published on 5 December 2014

E2f1 deletion attenuates infarct-induced ventricular remodeling without affecting O-GlcNAcylation

scientific article published on 31 May 2019

Efficient homing of multipotent adult mesenchymal stem cells depends on FROUNT-mediated clustering of CCR2

scientific article published on 01 June 2008

Epigenetic Regulation of Angiogenesis by JARID1B-Induced Repression of HOXA5.

scientific article published on 28 May 2015

Epigenetically modified cardiac mesenchymal stromal cells limit myocardial fibrosis and promote functional recovery in a model of chronic ischemic cardiomyopathy

scientific article published on 16 November 2018

Exercise Controls Non-Coding RNAs

scientific article published on 01 April 2015

Exercise-Induced Changes in Glucose Metabolism Promote Physiological Cardiac Growth.

scientific article published on 31 August 2017

Exon Array Analyzer: a web interface for Affymetrix exon array analysis.

scientific article published on 6 October 2009

Functional characterization of long noncoding RNAs

scientific article published on 01 May 2020

Gene Expression Profiling Reveals the Shared and Distinct Transcriptional Signatures in Human Lung Epithelial Cells Infected With SARS-CoV-2, MERS-CoV, or SARS-CoV: Potential Implications in Cardiovascular Complications of COVID-19

scientific article published on 01 January 2020

Hematopoietic Deficiency of the Long Noncoding RNA MALAT1 Promotes Atherosclerosis and Plaque Inflammation

scientific article published on 01 March 2019

High-Throughput Methods to Detect Long Non-Coding RNAs

scientific article published on 31 August 2017

Identification and Characterization of Hypoxia-Regulated Endothelial Circular RNA.

scientific article published on 16 September 2015

Identification and Functional Characterization of Hypoxia-Induced Endoplasmic Reticulum Stress Regulating lncRNA (HypERlnc) in Pericytes

scientific article published on 13 June 2017

Identification of right heart-enriched genes in a murine model of chronic outflow tract obstruction

article

Increasing workflow development speed and reproducibility with Vectools

article

Investigation of RNA Editing Sites within Bound Regions of RNA-Binding Proteins

scientific article published on 29 November 2019

Logic programming to infer complex RNA expression patterns from RNA-seq data

scientific article

Long Non-Coding RNAs in Diffuse Large B-Cell Lymphoma

scientific article published on 28 December 2020

Long Non-Coding RNAs in Liver Cancer and Nonalcoholic Steatohepatitis

scientific article published on 29 August 2020

Long Non-coding RNAs in Endothelial Biology.

scientific article

Long Noncoding RNA MANTIS Facilitates Endothelial Angiogenic Function

scientific article published on 28 March 2017

Long noncoding RNA MALAT1 regulates endothelial cell function and vessel growth

scientific article published on 6 March 2014

Long noncoding RNAs in cardiovascular diseases

scientific article

Macrophage Long Non-Coding RNAs in Pathogenesis of Cardiovascular Disease

scientific article published on 11 July 2020

Mesenchymal stem cells attenuate inflammatory processes in the heart and lung via inhibition of TNF signaling

scientific article published on 19 July 2016

Noncoder: a web interface for exon array-based detection of long non-coding RNAs

scientific article published on 24 September 2012

Physiological roles of non-coding RNAs

scientific article published on 15 May 2019

RNA Editing: Unexplored Opportunities in the Cardiovascular System.

scientific article

RNAEditor: easy detection of RNA editing events and the introduction of editing islands

scientific article published on 30 September 2016

Regulation of miR-17-92a cluster processing by the microRNA binding protein SND1.

scientific article published on 13 June 2013

Resolving the problem of multiple accessions of the same transcript deposited across various public databases.

scientific article published on 26 February 2016

Sca1-derived cells are a source of myocardial renewal in the murine adult heart.

scientific article published on 24 October 2013

Screening and validation of lncRNAs and circRNAs as miRNA sponges

scientific article published on 3 July 2016

Specific phenotype and function of CD56-expressing innate immune cell subsets in human thymus

scientific article published on 28 June 2016

TAK1 regulates skeletal muscle mass and mitochondrial function

scientific article published on 8 February 2018

The identification and characterization of novel transcripts from RNA-seq data.

scientific article

Upregulations of Gata4 and oxytocin receptor are important in cardiomyocyte differentiation processes of P19CL6 cells.

scientific article published on February 2007

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