Search filters

List of works by Jonathan G. Frye

A newly developed Escherichia coli isolate panel from a cross section of U.S. animal production systems reveals geographic and commodity-based differences in antibiotic resistance gene carriage

scientific article published on 13 August 2019

A non-redundant microarray of genes for two related bacteria

scientific article

Alternative sigma factor interactions in Salmonella: sigma and sigma promote antioxidant defences by enhancing sigma levels

scientific article

An FDA bioinformatics tool for microbial genomics research on molecular characterization of bacterial foodborne pathogens using microarrays ⬇️

scientific article published on October 7, 2010

An assay for determining the susceptibility of Salmonella isolates to commercial and household biocides

scientific article published in PLoS ONE

An oligonucleotide microarray to characterize multidrug resistant plasmids

scientific article published on 4 February 2010

Analysis of AI-2/LuxS-dependent transcription in Campylobacter jejuni strain 81-176.

scientific article published in August 2008

Analysis of Campylobacter jejuni whole-genome DNA microarrays: significance of prophage and hypervariable regions for discriminating isolates

scientific article published on 16 April 2012

Analysis of Salmonella enterica with reduced susceptibility to the third-generation cephalosporin ceftriaxone isolated from U.S. cattle during 2000-2004.

scientific article published in December 2008

Analysis of antimicrobial resistance genes detected in multidrug-resistant Salmonella enterica serovar Typhimurium isolated from food animals

scientific article published on 3 April 2011

Analysis of antimicrobial resistance genes detected in multiple-drug-resistant Escherichia coli isolates from broiler chicken carcasses.

scientific article

Antimicrobial Resistance Gene Detection and Plasmid Typing Among Multidrug Resistant Enterococci Isolated from Freshwater Environment

scientific article published on 02 September 2020

Antimicrobial Resistance Genes, Cassettes, and Plasmids Present in Associated With United States Food Animals

article

Antimicrobial Resistance, Genetic Diversity and Multilocus Sequence Typing of Escherichia coli from Humans, Retail Chicken and Ground Beef in Egypt

scientific article published on 08 May 2020

Antimicrobial resistance genes in multidrug-resistant Salmonella enterica isolated from animals, retail meats, and humans in the United States and Canada

scientific article

Antimicrobial resistance, virulence determinants and genetic profiles of clinical and nonclinical Enterococcus cecorum from poultry

scientific article

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

scientific article

Carcass orientation and drip time affect potential surface water carryover for broiler carcasses subjected to a post-chill water dip or spray1.

scientific article published on 2 September 2016

Carriage and Gene Content Variability of the pESI-Like Plasmid Associated with <i>Salmonella</i> Infantis Recently Established in United States Poultry Production

scientific article published on 18 December 2020

Characteristics of plasmids in multi-drug-resistant Enterobacteriaceae isolated during prospective surveillance of a newly opened hospital in Iraq

scientific article

Characterization of Multidrug-Resistant Escherichia coli by Antimicrobial Resistance Profiles, Plasmid Replicon Typing, and Pulsed-Field Gel Electrophoresis

scientific article published on 19 February 2011

Characterization of small ColE1-like plasmids conferring kanamycin resistance in Salmonella enterica subsp. enterica serovars Typhimurium and Newport

scientific article published on 25 January 2010

Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.

scientific article published in April 2005

Comparison of Salmonella enterica serotype Infantis isolates from a veterinary teaching hospital

scientific article published in June 2007

Comparison of dkgB-linked intergenic sequence ribotyping to DNA microarray hybridization for assigning serotype to Salmonella enterica

scientific article published on 19 October 2012

Correlation of phenotype with the genotype of egg-contaminating Salmonella enterica serovar Enteritidis.

scientific article

DNA microarray detection of antimicrobial resistance genes in diverse bacteria.

scientific article

DNA microarray-based typing of an atypical monophasic Salmonella enterica serovar

scientific article

Detection of KPC-2 in a clinical isolate of Proteus mirabilis and first reported description of carbapenemase resistance caused by a KPC beta-lactamase in P. mirabilis

scientific article published on 16 July 2008

Detection of Salmonella enterica subpopulations by phenotype microarray antibiotic resistance patterns.

scientific article published on 26 October 2007

Development of a DNA microarray to detect antimicrobial resistance genes identified in the National Center for Biotechnology Information database

scientific article

Diversity and antimicrobial resistance of Enterococcus from the Upper Oconee Watershed, Georgia

scientific article published on 20 January 2020

Diversity of Plasmids and Antimicrobial Resistance Genes in Multidrug-Resistant Escherichia coli Isolated from Healthy Companion Animals.

scientific article

Diversity of Plasmids and Genes Encoding Resistance to Extended-Spectrum β-Lactamase in Escherichia coli from Different Animal Sources

scientific article published in 2021

Draft Genome Sequence Analysis of Multidrug-Resistant Escherichia coli Strains Isolated in 2013 from Humans and Chickens in Nigeria

scientific article published on 5 October 2017

Draft Genome Sequence of Salmonella enterica subsp. diarizonae Serovar 61:k:1,5,(7) Strain CRJJGF_00165 (Phylum Gammaproteobacteria).

scientific article published on 23 November 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Bardo Strain CRJJGF_00099 (Phylum Gammaproteobacteria).

scientific article published on 15 September 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Blockley Strain CRJJGF_00147 (Phylum Gammaproteobacteria).

scientific article published on 08 September 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Kiambu Strain CRJJGF_00061 (Phylum Gammaproteobacteria).

scientific article published on 07 July 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Lille Strain CRJJGF_000101 (Phylum Gammaproteobacteria).

scientific article published on 14 July 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Orion Strain CRJJGF_00093 (Phylum Gammaproteobacteria)

scientific article published on 29 September 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Putten Strain CRJJGF_00159 (Phylum Gammaproteobacteria).

scientific article published on September 2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Widemarsh Strain CRJJGF_00058 (Phylum Gammaproteobacteria).

scientific article published on 14 July 2016

Draft Genome Sequences of Eight Streptogramin-Resistant Enterococcus Species Isolated from Animal and Environmental Sources in the United States.

scientific article

Draft genome sequence of a human-associated streptogramin-resistant Staphylococcus aureus

scientific article published on 12 December 2018

Draft genome sequences of two ciprofloxacin-resistant Salmonella enterica subsp. enterica serotype Kentucky ST198 isolated from retail chicken carcasses in Egypt

scientific article published on 30 June 2018

Evidence of a conjugal erythromycin resistance element in the Lyme disease spirochete Borrelia burgdorferi.

scientific article

Fitness costs and stability of a high-level ciprofloxacin resistance phenotype in Salmonella enterica serotype enteritidis: reduced infectivity associated with decreased expression of Salmonella pathogenicity island 1 genes

scientific article

Gene Expression Response of Salmonella enterica Serotype Enteritidis Phage Type 8 to Subinhibitory Concentrations of the Plant-Derived Compounds Trans-Cinnamaldehyde and Eugenol

scientific article published on 26 September 2017

Gene expression analysis of Salmonella enterica Enteritidis Nal(R) and Salmonella enterica Kentucky 3795 exposed to HCl and acetic acid in rich medium

scientific article

Gene expression patterns during swarming in Salmonella typhimurium: genes specific to surface growth and putative new motility and pathogenicity genes

scientific article published in April 2004

Genetic Characterization of Antimicrobial-Resistant Escherichia coli Isolated from a Mixed-Use Watershed in Northeast Georgia, USA

scientific article published on 07 October 2019

Genetic mechanisms of antimicrobial resistance identified in Salmonella enterica, Escherichia coli, and Enteroccocus spp. isolated from U.S. food animals

scientific article published on 23 May 2013

Genomic Analysis of Multidrug-Resistant Escherichia coli from Surface Water in Northeast Georgia, United States: Presence of an ST131 Epidemic Strain Containing blaCTX-M-15 on a Phage-Like Plasmid

scientific article published on 14 November 2019

Genomic Comparison of Conjugative Plasmids from Salmonella enterica and Escherichia coli Encoding Beta-Lactamases and Capable of Mobilizing Kanamycin Resistance Col-like Plasmids

scientific article published in 2021

Genomic comparison of diverse Salmonella serovars isolated from swine

scientific article published on 01 November 2019

Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages

scientific article

Genotypic and phenotypic correlations of multidrug-resistant Acinetobacter baumannii-A. calcoaceticus complex strains isolated from patients at the National Naval Medical Center

scientific article published on 25 August 2010

Genotyping Campylobacter jejuni by comparative genome indexing: an evaluation with pulsed-field gel electrophoresis and flaA SVR sequencing.

scientific article published in April 2009

Global regulation by CsrA in Salmonella typhimurium

scientific article

Host gene expression changes and DNA amplification during temperate phage induction

scientific article published on February 2005

Hydrogen-stimulated carbon acquisition and conservation in Salmonella enterica serovar Typhimurium

scientific article published on 19 August 2011

Identification and sequences of the Treponema pallidum flhA, flhF, and orf304 genes

scientific article

Identification and sequences of the Treponema pallidum fliM', fliY, fliP, fliQ, fliR and flhB' genes.

scientific article published on December 1995

Identification and transcriptional analysis of a Treponema pallidum operon encoding a putative ABC transport system, an iron-activated repressor protein homolog, and a glycolytic pathway enzyme homolog.

scientific article published on September 1997

Identification of new flagellar genes of Salmonella enterica serovar Typhimurium

scientific article

Identification, sequences, and expression of Treponema pallidum chemotaxis genes.

scientific article published on January 1997

In Vivo Transmission of an IncA/C Plasmid in Escherichia coli Depends on Tetracycline Concentration, and Acquisition of the Plasmid Results in a Variable Cost of Fitness

scientific article published on 13 March 2015

Inc A/C plasmids are prevalent in multidrug-resistant Salmonella enterica isolates

scientific article published on 30 January 2009

Increased expression of Borrelia burgdorferi vlsE in response to human endothelial cell membranes

scientific article

Insights into the complex regulation of rpoS in Borrelia burgdorferi

scientific article

Microarray analysis of antimicrobial resistance genes in Salmonella enterica from preharvest poultry environment

scientific article published on 23 March 2009

Microarray-based analysis of IncA/C plasmid-associated genes from multidrug-resistant Salmonella enterica

scientific article

Molecular analysis of imipenem-resistant Acinetobacter baumannii isolated from US service members wounded in Iraq, 2003-2008

scientific article

Multidrug resistant Mannheimia haemolytica isolated from high-risk beef stocker cattle after antimicrobial metaphylaxis and treatment for bovine respiratory disease

scientific article published on 08 June 2018

Novel DNA Binding and Regulatory Activities for σ54 (RpoN) in Salmonella enterica Serovar Typhimurium 14028s

scientific article published on 3 April 2017

Presence of the KPC carbapenemase gene in Enterobacteriaceae causing bacteremia and its correlation with in vitro carbapenem susceptibility.

scientific article published on 19 November 2008

Prevalence and Antimicrobial Resistance in Escherichia coli from Food Animals in Lagos, Nigeria

scientific article published on 6 February 2015

Prevalence and characterization of Escherichia coli isolated from the Upper Oconee Watershed in Northeast Georgia.

scientific article

Prevalence and multidrug resistance of Escherichia coli from community-acquired infections in Lagos, Nigeria

scientific article published on 30 September 2016

Prevalence of ColE1-like plasmids and kanamycin resistance genes in Salmonella enterica serovars.

scientific article

Prevalence, distribution and characterisation of ceftiofur resistance in Salmonella enterica isolated from animals in the USA from 1999 to 2003.

scientific article published on 24 May 2007

Prevalence, species distribution and antimicrobial resistance of enterococci isolated from dogs and cats in the United States.

scientific article published on 9 April 2009

Rainfall and tillage effects on transport of fecal bacteria and sex hormones 17beta-estradiol and testosterone from broiler litter applications to a Georgia Piedmont Ultisol

scientific article published on 20 June 2008

Rapid multiplex PCR and real-time TaqMan PCR assays for detection of Salmonella enterica and the highly virulent serovars Choleraesuis and Paratyphi C.

scientific article published on 15 October 2008

Regulation of Salmonella typhimurium virulence gene expression by cationic antimicrobial peptides.

scientific article

Related antimicrobial resistance genes detected in different bacterial species co-isolated from swine fecal samples.

scientific article published on 8 March 2011

Relative survival of four serotypes of Salmonella enterica in low-water activity whey protein powder held at 36 and 70°C at various water activity levels

scientific article published in July 2014

Resistance Genes, Plasmids, Multilocus Sequence Typing (MLST), and Phenotypic Resistance of Non-Typhoidal Salmonella (NTS) Isolated from Slaughtered Chickens in Burkina Faso

scientific article published in 2022

Salmonella enterica serovar Typhimurium requires the Lpf, Pef, and Tafi fimbriae for biofilm formation on HEp-2 tissue culture cells and chicken intestinal epithelium.

scientific article published on June 2006

Salmonella, Campylobacter and Enterococcus spp.: their antimicrobial resistance profiles and their spatial relationships in a synoptic study of the Upper Oconee River basin.

scientific article published on 9 August 2007

Sequence analysis of a group of low molecular-weight plasmids carrying multiple IS903 elements flanking a kanamycin resistance aph gene in Salmonella enterica serovars

scientific article published on 13 February 2011

Sequence of the Leptospira biflexa serovar patoc recA gene

scientific article published in December 1995

Sequences of the Salmonella typhimurium mglA and mglC genes

scientific article published on May 1996

The intestinal fatty acid propionate inhibits Salmonella invasion through the post-translational control of HilD

scientific article published on 28 January 2013

Transmission of Salmonella enterica serotype Typhimurium in poultry with and without antimicrobial selective pressure

scientific article published in December 2006

Use of a promiscuous, constitutively-active bacterial enhancer-binding protein to define the σ⁵⁴ (RpoN) regulon of Salmonella Typhimurium LT2.

scientific article

Whole genome sequencing of multidrug-resistant Salmonella enterica serovar Typhimurium isolated from humans and poultry in Burkina Faso.

scientific article published on 12 February 2018

Paulina is supported by:

About Paulina

Help