Search filters

List of works by Takuya Ueda

7-Methylguanosine at the anticodon wobble position of squid mitochondrial tRNA(Ser)GCU: molecular basis for assignment of AGA/AGG codons as serine in invertebrate mitochondria.

scientific article published in July 1998

70 S ribosomes bind to Shine-Dalgarno sequences without required dissociations.

scientific article

70S-scanning initiation is a novel and frequent initiation mode of ribosomal translation in bacteria

scientific article published on 17 February 2016

A Novel Modified Nucleoside Found at the First Position of the Anticodon of Methionine tRNA from Bovine Liver Mitochondria

scientific article published on 01 March 1994

A bacterial elongation factor G homologue exclusively functions in ribosome recycling in the spirochaete Borrelia burgdorferi

scientific article published in February 2010

A cytotoxic ribonuclease targeting specific transfer RNA anticodons

scientific article published on 01 March 1999

A new method for identifying the amino acid attached to a particular RNA in the cell

scientific article published on 01 March 1996

A novel cloverleaf structure found in mammalian mitochondrial tRNA(Ser) (UCN).

scientific article

A novel complete reconstitution system for membrane integration of the simplest membrane protein

scientific article published on 15 March 2010

A novel screening system for self-mRNA targeting proteins.

scientific article

A novel wobble rule found in starfish mitochondria. Presence of 7-methylguanosine at the anticodon wobble position expands decoding capability of tRNA

scientific article published on 01 February 1998

A point mutation in ribosomal protein L7/L12 reduces its ability to form a compact dimer structure and to assemble into the GTPase center.

scientific article published in April 2003

A synthetic biology approach to the construction of membrane proteins in semi-synthetic minimal cells.

scientific article published on 5 November 2008

Amphiphilic polysaccharide nanogels as artificial chaperones in cell-free protein synthesis.

scientific article published on 7 March 2011

An extra tRNAGly(U*CU) found in ascidian mitochondria responsible for decoding non-universal codons AGA/AGG as glycine

scientific article

Analysis of the functional consequences of lethal mutations in mitochondrial translational elongation factors

scientific article

Antitumorigenic effect of interferon-β by inhibition of undifferentiated glioblastoma cells

scientific article published on 14 September 2015

Assignment of imino proton signals of G-C base pairs and magnesium ion binding: an NMR study of bovine mitochondrial tRNA(SerGCU) lacking the entire D arm

scientific article published on 01 June 1997

Bimodal protein solubility distribution revealed by an aggregation analysis of the entire ensemble of Escherichia coli proteins

scholarly article

CdsA is involved in biosynthesis of glycolipid MPIase essential for membrane protein integration in vivo

scientific article published in Scientific Reports

Cell-free synthesis of SecYEG translocon as the fundamental protein transport machinery

scientific article

Cell-free translation reconstituted with purified components

scientific article published in August 2001

Characterization of glioma stem-like cells from human glioblastomas.

scientific article published on 7 May 2015

Characterization of serine and leucine tRNAs in an asporogenic yeast Candida cylindracea and evolutionary implications of genes for tRNA(Ser)CAG responsible for translation of a non-universal genetic code.

scientific article

Characterization of the catalytic activity of the gamma-phage lysin, PlyG, specific for Bacillus anthracis

scientific article published on 25 July 2008

Co-translational binding of GroEL to nascent polypeptides is followed by post-translational encapsulation by GroES to mediate protein folding

scientific article published on 05 June 2006

Co-translational involvement of the chaperonin GroEL in the folding of newly translated polypeptides.

scientific article

Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences: a unique wobble rule in animal mitochondria

scientific article published on November 1999

Codons AGA and AGG are read as glycine in ascidian mitochondria

scientific article

Comprehensive study of liposome-assisted synthesis of membrane proteins using a reconstituted cell-free translation system.

scientific article

Conformatzonal Properties of a Novel Modified Nucleoside, 5-Formylcytidine, Found at the First Position of the Anticodon of Bovine Mitochondrial tRNAMet

Construction of integrated gene logic-chip

scientific article published on 23 July 2018

Conversion of aminoacylation specificity from tRNA(Tyr) to tRNA(Ser) in vitro

scientific article published on December 1990

Corrigendum: The PURE system for the cell-free synthesis of membrane proteins

scientific article published on 25 February 2016

Crystallization and preliminary X-ray analysis of peptidyl-tRNA hydrolase from Thermus thermophilus HB8

scientific article published on 27 February 2013

De Novo Synthesis of Basal Bacterial Cell Division Proteins FtsZ, FtsA, and ZipA Inside Giant Vesicles.

scientific article published on 7 March 2018

Decreased CCA-addition in human mitochondrial tRNAs bearing a pathogenic A4317G or A10044G mutation

scientific article published on 5 March 2003

Defect in modification at the anticodon wobble nucleotide of mitochondrial tRNA(Lys) with the MERRF encephalomyopathy pathogenic mutation.

scientific article published in February 2000

Development of a minimal cell-free translation system for the synthesis of presecretory and integral membrane proteins.

scientific article

Differential Effects of IFN-β on the Survival and Growth of Human Vascular Smooth Muscle and Endothelial Cells

scientific article published on January 2015

Down-regulation of the mitochondrial translation system during terminal differentiation of HL-60 cells by 12-O-tetradecanoyl-1-phorbol-13-acetate: comparison with the cytoplasmic translation system

scientific article published on 2 September 2003

EF-G2mt is an exclusive recycling factor in mammalian mitochondrial protein synthesis

scientific article

Effects of chain length of an amphipathic polypeptide carrying the repeated amino acid sequence (LETLAKA)(n) on α-helix and fibrous assembly formation.

scientific article published on 15 April 2013

Efficacy of ribavirin against malignant glioma cell lines.

scientific article

Efficacy of ribavirin against malignant glioma cell lines: Follow-up study

scientific article published on 11 December 2017

Efficient expression of E. coli dihydrofolate reductase gene by an in vitro translation system using phosphorothioate mRNA.

scientific article

Efficient protein selection based on ribosome display system with purified components.

scientific article

Elongation factor G is a critical target during oxidative damage to the translation system of Escherichia coli

scientific article published on 6 July 2012

Elongation factor Tu mutants expand amino acid tolerance of protein biosynthesis system

scientific article published on 25 October 2007

Epitope mapping using ribosome display in a reconstituted cell-free protein synthesis system

scientific article

Esterification of Escherichia coli tRNAs with D-histidine and D-lysine by aminoacyl-tRNA synthetases.

scientific article published in May 2005

Evidence for the translation initiation of leaderless mRNAs by the intact 70 S ribosome without its dissociation into subunits in eubacteria.

scientific article

Existence of nuclear-encoded 5S-rRNA in bovine mitochondria

scientific article published on 01 January 1994

Expression and characterization of bovine mitochondrial methionyl-tRNA transformylase

scientific article published on 01 December 1998

Factor- and energy-free peptide synthesis promoted by aromatic tertiary amines including nucleic acid-related compounds.

scientific article

Functional analysis of membranous Fo-a subunit of F1Fo-ATP synthase by in vitro protein synthesis.

scientific article

Gene contents and organization of a mitochondrial DNA segment of the squid Loligo bleekeri

scientific article published in June 1999

Global analysis of chaperone effects using a reconstituted cell-free translation system.

scientific article

Higher-order structure of bovine mitochondrial tRNA(Phe) lacking the 'conserved' GG and T psi CG sequences as inferred by enzymatic and chemical probing.

scientific article published on February 1994

Higher-order structure of bovine mitochondrial tRNA(SerUGA): chemical modification and computer modeling.

scientific article published on December 1994

Human G-proteins, ObgH1 and Mtg1, associate with the large mitochondrial ribosome subunit and are involved in translation and assembly of respiratory complexes

scientific article

Human Mitochondrial mRNAs Are Stabilized with Polyadenylation Regulated by Mitochondria-specific Poly(A) Polymerase and Polynucleotide Phosphorylase

scientific article published in Journal of Biological Chemistry

Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases

scientific article

In vitro synthesis of the E. coli Sec translocon from DNA

scientific article published on 04 June 2014

Kinetic analysis of ribosome binding process onto mRNA using a quartz-crystal microbalance

scientific article published in January 2006

Large-scale aggregation analysis of eukaryotic proteins reveals an involvement of intrinsically disordered regions in protein folding

scientific article published on 12 January 2018

Large-scale analysis of macromolecular crowding effects on protein aggregation using a reconstituted cell-free translation system

scientific article

Low conservation and species-specific evolution of alternative splicing in humans and mice: comparative genomics analysis using well-annotated full-length cDNAs

scientific article published on 05 October 2008

Mammalian mitochondrial methionyl-tRNA transformylase from bovine liver. Purification, characterization, and gene structure.

scientific article

Mg2+ dependence of 70 S ribosomal protein flexibility revealed by hydrogen/deuterium exchange and mass spectrometry.

scientific article published on 18 December 2009

Non-universal decoding of the leucine codon CUG in several Candida species

scientific article

Nuclear Respiratory Factor 2β (NRF-2β) recruits NRF-2α to the nucleus by binding to importin-α:β via an unusual monopartite-type nuclear localization signal

scientific article published on 13 July 2013

Nuclease resistance of an extraordinarily thermostable mini-hairpin DNA fragment, d(GCGAAGC) and its application to in vitro protein synthesis.

scientific article published on June 1994

Oxidation of a Cysteine Residue in Elongation Factor EF-Tu Reversibly Inhibits Translation in the Cyanobacterium Synechocystis sp. PCC 6803.

scientific article

Oxidation of translation factor EF-G transiently retards the translational elongation cycle in Escherichia coli.

scientific article published on 4 March 2015

PURE ribosome display and its application in antibody technology

scientific article published on 18 April 2014

PURE technology

scientific article published in January 2010

Peptide screening using PURE ribosome display.

scientific article

Phosphorothioate-containing RNAs show mRNA activity in the prokaryotic translation systems in vitro

scientific article published on February 1991

Polyadenylation in mammalian mitochondria: insights from recent studies.

scientific article

Primary sequence of mitochondrial tRNA(Arg) of a nematode Ascaris suum: occurrence of unmodified adenosine at the first position of the anticodon

scientific article published in February 1997

Production and characterization of genetically modified human IL-11 variants

scientific article

Production of multi-subunit complexes on liposome through an E. coli cell-free expression system

scientific article published on 01 January 2010

Protein synthesis by pure translation systems.

scientific article

Protein synthesis yield increased 72 times in the cell-free PURE system.

scientific article published in August 2014

Purified cell-free systems as standard parts for synthetic biology

scientific article

Pyridine-promoted factor- and energy-free peptide synthesis systems prepared from various organisms including prokaryote, eukaryote, and mitochondria.

scientific article

RNA Study Using DNA Nanotechnology.

scientific article published on February 2016

RNA editing in the acceptor stem of squid mitochondrial tRNA(Tyr).

scientific article published on December 1996

Radiofrequency ablation of the liver: determination of ablative margin at MR imaging with impaired clearance of ferucarbotran--feasibility study.

scientific article published on 27 February 2009

Real-time monitoring of cell-free translation on a quartz-crystal microbalance.

scientific article

Reconstitution of 30S ribosomal subunits in vitro using ribosome biogenesis factors

scientific article published on 03 August 2018

Reconstitution of peptide bond formation with Escherichia coli 23S ribosomal RNA domains.

scientific article

Relationship among coelacanths, lungfishes, and tetrapods: a phylogenetic analysis based on mitochondrial cytochrome oxidase I gene sequences

scientific article published on 01 June 1994

Retraction

scientific article published on 01 May 1999

Ribosomal protein S1 is not essential for the trans-translation machinery.

scientific article published on 2 March 2007

Ribosome display with the PURE technology

scientific article published on 01 January 2010

Ribosome rescue and translation termination at non-standard stop codons by ICT1 in mammalian mitochondria.

scientific article

Role of positions e and g in the fibrous assembly formation of an amphipathic α-helix-forming polypeptide

scientific article published in May 2014

Serine tRNA complementary to the nonuniversal serine codon CUG in Candida cylindracea: evolutionary implications ⬇️

scientific article published on August 15, 1992

Signal recognition particle and SecA cooperate during export of secretory proteins with highly hydrophobic signal sequences

scientific article

Single molecule imaging of the trans-translation entry process via anchoring of the tagged ribosome

scientific article published on 28 January 2011

Single-Molecule Analysis of the Target Cleavage Reaction by the Drosophila RNAi Enzyme Complex.

scientific article

Single-molecule imaging of full protein synthesis by immobilized ribosomes

scientific article published on 29 May 2008

SmpB triggers GTP hydrolysis of elongation factor Tu on ribosomes by compensating for the lack of codon-anticodon interaction during trans-translation initiation

scientific article published on 06 April 2006

Spermidine inhibits transient and stable ribosome subunit dissociation

scientific article published on 20 January 2006

Structural basis for template-independent RNA polymerization.

scientific article

Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase

scientific article

Structural feature of the initiator tRNA gene from Pyrodictium occultum and the thermal stability of its gene product, tRNA(imet)

scientific article published on 01 January 1996

Target specificity of an autoreactive pathogenic human γδ-T cell receptor in myositis.

scientific article published on May 2012

Template-dependent polypeptide synthesis in a factor- and energy-free translation system promoted by pyridine.

scientific article

The PURE system for protein production.

scientific article published in January 2014

The PURE system for the cell-free synthesis of membrane proteins

scientific article published on 13 August 2015

The T-loop region of animal mitochondrial tRNA(Ser)(AGY) is a main recognition site for homologous seryl-tRNA synthetase

scientific article

The Termination Phase in Protein Synthesis is not Obligatorily Followed by the RRF/EF-G-Dependent Recycling Phase.

scientific article published on 31 May 2016

The ability of bovine mitochondrial transfer RNAMet to decode AUG and AUA codons.

scientific article

The cephalopod Loligo bleekeri mitochondrial genome: multiplied noncoding regions and transposition of tRNA genes

scientific article published on 01 April 2002

The evolutionary change of the genetic code as restricted by the anticodon and identity of transfer RNA.

scientific article published on December 1993

The gene for serine tRNA having anticodon sequence CAG in a pathogenic yeast, Candida albicans.

scientific article

The non-standard genetic code of Candida spp.: an evolving genetic code or a novel mechanism for adaptation?

scientific article published in November 1997

The pathogenic A4269G mutation in human mitochondrial tRNA(Ile) alters the T-stem structure and decreases the binding affinity for elongation factor Tu.

scientific article published in March 2004

The presence of pseudouridine in the anticodon alters the genetic code: a possible mechanism for assignment of the AAA lysine codon as asparagine in echinoderm mitochondria.

scientific article published on April 1999

The role of SmpB protein in trans-translation.

scientific article published in March 2002

The role of tightly bound ATP in Escherichia coli tRNA nucleotidyltransferase

article

Translation enhancer improves the ribosome liberation from translation initiation.

scientific article published on 22 August 2013

Traveling Time of a translating ribosome along messenger RNA monitored directly on a quartz crystal microbalance

scientific article published on 10 April 2012

Twin-arginine-dependent translocation of SufI in the absence of cytosolic helper proteins.

scientific article published in June 2009

Two nucleotides 5'-adjacent to the anticodon of rat cytoplasmic tRNA(Asp) are not edited

scientific article published on 01 January 1996

Type 1 IFN inhibits the growth factor deprived apoptosis of cultured human aortic endothelial cells and protects the cells from chemically induced oxidative cytotoxicity

scientific article published on 01 December 2012

Unbiased tracking of the progression of mRNA and protein synthesis in bulk and in liposome-confined reactions.

scientific article published on 11 September 2013

UncI protein can mediate ring-assembly of c-subunits of FoF1-ATP synthase in vitro

scientific article published on 07 January 2008

Unique structure of new serine tRNAs responsible for decoding leucine codon CUG in various Candida species and their putative ancestral tRNA genes

scientific article published in January 1994

Unusual anticodon loop structure found in E.coli lysine tRNA.

scientific article published on January 1994

cDNA sequence of a translational elongation factor Ts homologue from Caenorhabditis elegans: mitochondrial factor-specific features found in the nematode homologue peptide

scientific article published in July 1997

pH responsiveness of fibrous assemblies of repeat-sequence amphipathic α-helix polypeptides.

scientific article published on 2 April 2015

Paulina is supported by:

About Paulina

Help