List of works - Normand Mousseau

A Generalized Attraction–Repulsion Potential and Revisited Fragment Library Improves PEP-FOLD Peptide Structure Prediction

scientific article published on 17 March 2022

A multiscale approach to characterize the early aggregation steps of the amyloid-forming peptide GNNQQNY from the yeast prion sup-35

scientific article

A novel intercalation cathode material for sodium-based batteries

ARTIST: an activated method in internal coordinate space for sampling protein energy landscapes

scientific article published in June 2006

Ab initio characterization of arsenic vacancy diffusion pathways in GaAs with SIEST-A-RT

article

Ab initio study of the diffusion mechanisms of gallium in a silicon matrix

scholarly article by K. Levasseur-Smith & Normand Mousseau published July 2008 in European Physical Journal B

Ab-initio simulations of self-diffusion mechanisms in semiconductors

Activated mechanisms in amorphous silicon: An activation-relaxation-technique study

scholarly article by Normand Mousseau & G. T. Barkema published 15 January 2000 in Physical Review B

Activated sampling in complex materials at finite temperature: The properly obeying probability activation-relaxation technique

Aggregating the amyloid Abeta(11-25) peptide into a four-stranded beta-sheet structure.

scientific article

Aggregation process of Aβ1-40with non-Aβamyloid component ofα-synuclein

Algorithmic developments of the kinetic activation-relaxation technique: Accessing long-time kinetics of larger and more complex systems

scientific article published in October 2017

All-Atom Stability and Oligomerization Simulations of Polyglutamine Nanotubes with and without the 17-Amino-Acid N-Terminal Fragment of the Huntingtin Protein

Amorphous silicon under mechanical shear deformations: Shear velocity and temperature effects

scholarly article in Physical Review B, vol. 83 no. 13, April 2011

Amyloid β Protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies

scientific article

Approximate ab initio calculations of electronic structure of amorphous silicon

article

Atomistic mechanisms of huntingtin N-terminal fragment insertion on a phospholipid bilayer revealed by molecular dynamics simulations

scientific article published on 18 February 2014

Binary continuous random networks

article

Carbon adsorption on and diffusion through the Fe(110) surface and in bulk: Developing a new strategy for the use of empirical potentials in complex material set-ups

Characterization of the stretched-exponential trap-time distributions in one-dimensional coupled map lattices

scientific article published on 12 December 2002

Charge-dependent migration pathways for the Ga vacancy inGaAs

article

Coarse-grained protein molecular dynamics simulations

article

Comment on “Boson peak in amorphous silicon: A numerical study”

scholarly article in Physical Review B, vol. 66 no. 8, August 2002

Comment on “Mechanism of Void Nucleation and Growth in bcc Fe: Atomistic Simulations at Experimental Time Scales”

scientific article published in Physical Review Letters

Comment on “Role of Lattice Vibrations in Adatom Diffusion”

scientific article published in Physical Review Letters

Comment on “Systematic approach to generate near-perfect periodic continuous random network models: Application to amorphousSi3N4”

scholarly article in Physical Review B, vol. 56 no. 21, December 1997

Complex folding pathways in a simple beta-hairpin

scientific article published in August 2004

Computational simulations of the early steps of protein aggregation

scientific article published on 05 January 2007

Computer models for amorphous silicon hydrides

scientific article published on 01 February 1990

Computer-simulated model structures for hydrogenated amorphous semiconductors

article

Contribution of vacancies to relaxation in amorphous materials: A kinetic activation-relaxation technique study

scholarly article in Physical Review B, vol. 87 no. 14, April 2013

Crystallization of amorphous silicon induced by mechanical shear deformations

scholarly article in Physical Review B, vol. 84 no. 1, July 2011

Crystallization study of model tetrahedral semiconductors

article

Dependence of the vibrational spectra of amorphous silicon on the defect concentration and ring distribution

article

Diffusion mechanisms of C in 100, 110 and 111 Fe surfaces studied using kinetic activation-relaxation technique

Diffusion of point defects in crystalline silicon using the kinetic activation-relaxation technique method

scholarly article in Physical Review B, vol. 91 no. 22, June 2015

Diffusion properties of Fe–C systems studied by using kinetic activation–relaxation technique

Distinct Dimerization for Various Alloforms of the Amyloid-Beta Protein: Aβ1–40, Aβ1–42, and Aβ1–40(D23N)

Distinct Morphologies for Amyloid Beta Protein Monomer: Aβ1–40, Aβ1–42, and Aβ1–40(D23N)

article

Distinct helix propensities and membrane interactions of human and rat IAPP(1-19) monomers in anionic lipid bilayers

scientific article published on 17 February 2015

Dynamical models of hydrogenated amorphous silicon

scientific article published on 01 April 1991

Dynamics of lennard-jones clusters: A characterization of the activation-relaxation technique

scientific article

Early oligomerization stages for the non-amyloid component of α-synuclein amyloid

Effect of the disulfide bond on the monomeric structure of human amylin studied by combined Hamiltonian and temperature replica exchange molecular dynamics simulations

scientific article published in May 2010

Efficient tight-binding Monte Carlo structural sampling of complex materials

article

Elementary mechanisms governing the dynamics of silica

article

Energy landscape of relaxed amorphous silicon

scholarly article in Physical Review B, vol. 68 no. 12, September 2003

Energy landscape of small clusters of self-interstitial dumbbells in iron

scholarly article in Physical Review B, vol. 83 no. 9, March 2011

Energy landscapes of the monomer and dimer of the Alzheimer's peptide Abeta(1-28).

scientific article

Enthalpy-entropy compensation of atomic diffusion originates from softening of low frequency phonons

scientific article published on 07 August 2020

Erratum “Tunable magnetic states in hexagonal boron nitride sheets” [Appl. Phys. Lett. 101, 132405 (2012)]

scholarly article published in Applied Physics Letters

Erratum: Computer models for amorphous silicon hydrides

scientific article published on 01 September 1990

Event-Based Relaxation of Continuous Disordered Systems

scientific article

Evolution of the Potential-Energy Surface of Amorphous Silicon

scientific article published in Physical Review Letters

Exploiting memory in event-based simulations

Exploring energy landscapes of protein folding and aggregation

scientific article published on May 2008

Exploring high-dimensional energy landscapes

article published in 1999

Exploring structural mechanisms in disordered materials using the activation-relaxation technique

article

Exploring the early steps of aggregation of amyloid-forming peptide KFFE

Exploring the early steps of amyloid peptide aggregation by computers

scientific article

Exploring the energy landscape of proteins: A characterization of the activation-relaxation technique

Fast bond-transposition algorithms for generating covalent amorphous structures

article

Finding reaction pathways and transition states: r-ARTn and d-ARTn as an efficient and versatile alternative to string approaches

scientific article published on 14 August 2020

First stages of silicon oxidation with the activation relaxation technique

scholarly article in Physical Review B, vol. 86 no. 7, August 2012

Fitting the Stillinger–Weber potential to amorphous silicon

Following atomistic kinetics on experimental timescales with the kinetic Activation–Relaxation Technique

Following the aggregation of amyloid-forming peptides by computer simulations

Free-Energy Landscape of the Amino-Terminal Fragment of Huntingtin in Aqueous Solution

scientific article

Frustration-Induced Phase Transition in High-Dimensional Deterministic Cellular Automata

article

Gallium self-interstitial relaxation in GaAs: Anab initiocharacterization

scholarly article by Marc-André Malouin et al published 16 July 2007 in Physical Review B

High-quality continuous random networks

scholarly article in Physical Review B, vol. 62 no. 8, August 2000

Holographic multiscale method used with non-biased atomistic forcefields for simulation of large transformations in protein

article

Identification of Relaxation and Diffusion Mechanisms in Amorphous Silicon

scientific article published in Physical Review Letters

In Silico Assembly of Alzheimer's Aβ16-22Peptide into β-Sheets

scientific article published in 2004

Influence of surface vacancy defects on the carburisation of Fe 110 surface by carbon monoxide.

scientific article

Insights on finite size effects in ab initio study of CO adsorption and dissociation on Fe 110 surface ⬇️

Investigating the kinetics of the formation of a C Cottrell atmosphere around a screw dislocation in bcc iron: a mixed-lattice atomistic kinetic Monte-Carlo analysis

scientific article published on 02 November 2020

Is Hydrogen Diffusion along Grain Boundaries Fast or Slow? Atomistic Origin and Mechanistic Modeling

scientific article published on 01 May 2019

Kinetic activation-relaxation technique

scientific article published on 17 October 2011

Kinetic activation-relaxation technique: An off-lattice self-learning kinetic Monte Carlo algorithm

article

Kinetics of amyloid aggregation: a study of the GNNQQNY prion sequence

scientific article

Large loop conformation sampling using the activation relaxation technique, ART-nouveau method

scientific article published on 15 May 2012

Length distributions in metallic alloys

scientific article published on 01 February 1992

Length mismatch in random semiconductor alloys. III. Crystalline and amorphous SiGe

scientific article published on 01 December 1992

Length mismatch in random semiconductor alloys. IV. General multinary compounds

scientific article published on 01 December 1995

Liquid–liquid phase transition in Stillinger–Weber silicon

Long-time relaxation of ion-bombarded silicon studied with the kinetic activation-relaxation technique: Microscopic description of slow aging in a disordered system

article

Mitigating Alzheimer's Disease with Natural Polyphenols: A Review

scientific article published on 01 January 2019

Molecular Dynamics Simulations of the Bacterial ABC Transporter SAV1866 in the Closed Form

article

Multiple phase changes induced by frustration in randomly connected cellular automata

Na 3 Fe 2 (SO 4 ) 2 (SO 3 N) as a potential high capacity cathode material

Navigation and analysis of the energy landscape of small proteins using the activation–relaxation technique

article

Nucleation and crystallization process of silicon using the Stillinger-Weber potential

scholarly article in Physical Review B, vol. 71 no. 9, March 2005

Numerical characterization of the Ga interstitial self-diffusion mechanisms in GaAs

Numerical studies of the vibrational isocoordinate rule in chalcogenide glasses

article

On the phase diagram of frustrated (quasi-)periodic cellular automata

Onset of avalanches in granular media

scientific article published on 01 May 1994

Optimal activation and diffusion paths of perfect events in amorphous silicon

article

Optimization of the Kinetic Activation-Relaxation Technique, an off-lattice and self-learning kinetic Monte-Carlo method

Optimized energy landscape exploration using the ab initio based activation-relaxation technique

scientific article published in July 2011

P1-168 Early steps of amyloid-petide oligomerisation explored by simulations

Pathway complexity of Alzheimer's beta-amyloid Abeta16-22 peptide assembly

scientific article published in July 2004

Photometric and polarimetric variability and mass-loss rate of the massive binary Wolf-Rayet star HDE 311884 (WN6 + 05: V) ⬇️

scientific article published in the Astrophysical Journal

Probing Potential Energy Surface Exploration Strategies for Complex Systems

scientific article published in April 2015

Probing amyloid fibril formation of the NFGAIL peptide by computer simulations

Probing the Huntingtin 1-17 membrane anchor on a phospholipid bilayer by using all-atom simulations

scientific article

Randomly connected cellular automata: a search for critical connectivities

Realistic models of paracrystalline silicon

scientific article

Recent developments in the study of continuous random networks

Relationship between dynamical heterogeneities and stretched exponential relaxation

Replenish and Relax: Explaining Logarithmic Annealing in Ion-Implantedc-Si

scientific article published in Physical Review Letters

Replica exchange molecular dynamics simulations of coarse-grained proteins in implicit solvent

scientific article published in January 2009

Role of detailed balance on the phase diagram of frustrated systems; the modified ANNNI model

article published in 1995

Role of the region 23-28 in Abeta fibril formation: insights from simulations of the monomers and dimers of Alzheimer's peptides Abeta40 and Abeta42.

scientific article published on June 2008

Sampling activated mechanisms in proteins with the activation-relaxation technique.

scientific article published in January 2001

Sampling small-scale and large-scale conformational changes in proteins and molecular complexes

Sampling the complex energy landscape of a simple β-hairpin

article

Sampling the diffusion paths of a neutral vacancy in silicon with quantum mechanical calculations

scholarly article in Physical Review B, vol. 70 no. 20, November 2004

Sampling the self-assembly pathways of KFFE hexamers

scientific article published on 17 September 2004

Searching for Science Criticism's Sources

Self-assembly of amyloid-forming peptides by molecular dynamics simulations

scientific article published on May 2008

Self-assembly of the beta2-microglobulin NHVTLSQ peptide using a coarse-grained protein model reveals a beta-barrel species

article

Self-organization with equilibration: A model for the intermediate phase in rigidity percolation

article

Self-organized criticality in the intermediate phase of rigidity percolation

Self-vacancies in gallium arsenide: An ab initio calculation

scholarly article by Fedwa El-Mellouhi & Normand Mousseau published 18 March 2005 in Physical Review B

Simulation of Single Particle Displacement Damage in Silicon–Part II: Generation and Long-Time Relaxation of Damage Structure

article published in 2017

Size-mismatch disorder at the surface of semiconductors

scientific article published in July 1995

Spontaneous formation of polyglutamine nanotubes with molecular dynamics simulations

article

Stimulating a Canadian narrative for climate

article

Strain broadening of the magnetization steps in diluted magnetic semiconductors

scholarly article in Physical Review B, vol. 56 no. 20, November 1997

Strain effects and intermixing at the Si surface: Importance of long-range elastic corrections in first-principles calculations ⬇️

scholarly article in Physical Review B, vol. 90 no. 15, October 2014

Strain-driven diffusion process during silicon oxidation investigated by coupling density functional theory and activation relaxation technique

scientific article published in August 2017

Stretched-exponential dynamics in a chain of coupled chaotic oscillators

article

Strong Long-Range Relaxations of Structural Defects in Graphene Simulated Using a New Semiempirical Potential ⬇️

Structural model for crystalline and amorphous Si-Ge alloys

article

Structural, electronic, and dynamical properties of amorphous gallium arsenide: A comparison between two topological models

scholarly article by Normand Mousseau & Laurent J. Lewis published 15 October 1997 in Physical Review B

Structure and Thermodynamics of Amylin Dimer Studied by Hamiltonian-Temperature Replica Exchange Molecular Dynamics Simulations

article

Structures and thermodynamics of Alzheimer's amyloid-beta Abeta(16-35) monomer and dimer by replica exchange molecular dynamics simulations: implication for full-length Abeta fibrillation

scientific article published in May 2009

Structures of Aβ17-42 trimers in isolation and with five small-molecule drugs using a hierarchical computational procedure

scientific article

Structures of soluble amyloid oligomers from computer simulations

scientific article

Surface diffusion coefficients by thermodynamic integration: Cu on Cu(100)

scholarly article in Physical Review B, vol. 58 no. 19, November 1998

Synchronization by Disorder in Coupled Systems

scientific article published in Physical Review Letters

The Activation-Relaxation Technique: ART Nouveau and Kinetic ART

The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems

scientific article published on 23 April 2014

The activation–relaxation technique: an efficient algorithm for sampling energy landscapes

article published in 2001

The beta-strand-loop-beta-strand conformation is marginally populated in beta2-microglobulin (20-41) peptide in solution as revealed by replica exchange molecular dynamics simulations

scientific article published on 11 April 2008

The complex folding pathways of protein A suggest a multiple-funnelled energy landscape

article published in 2008

The conformations of the amyloid-beta (21-30) fragment can be described by three families in solution

scientific article published on August 2006

The role of emerging grain boundary at iron surface, temperature and hydrogen on metal dusting initiation

Thermally activated charge reversibility of gallium vacancies in GaAs

article

Thermodynamics and dynamics of amyloid peptide oligomerization are sequence dependent

article

Tight-binding molecular-dynamics studies of defects and disorder in covalently bonded materials

article

Topology of Amorphous Tetrahedral Semiconductors on Intermediate Length Scales

scientific article published in Physical Review Letters

Traveling through potential energy landscapes of disordered materials: The activation-relaxation technique

article by Normand Mousseau & G. T. Barkema published 1 February 1998 in Physical Review E

Tunable magnetic states in hexagonal boron nitride sheets

Understanding long-time vacancy aggregation in iron: A kinetic activation-relaxation technique study ⬇️

scholarly article in Physical Review B, vol. 90 no. 13, October 2014

Understanding the EF-hand closing pathway using non-biased interatomic potentials

scientific article published in January 2012

Use of Umbrella Sampling to Calculate the Entrance/Exit Pathway for Z-Pro-Prolinal Inhibitor in Prolyl Oligopeptidase

scientific article

sAvalanche distribution in the Feder and Feder model: Effects of quenched disorder

article

List of works by Normand Mousseau

A Generalized Attraction–Repulsion Potential and Revisited Fragment Library Improves PEP-FOLD Peptide Structure Prediction

A multiscale approach to characterize the early aggregation steps of the amyloid-forming peptide GNNQQNY from the yeast prion sup-35

A novel intercalation cathode material for sodium-based batteries

ARTIST: an activated method in internal coordinate space for sampling protein energy landscapes

Ab initio characterization of arsenic vacancy diffusion pathways in GaAs with SIEST-A-RT

Ab initio study of the diffusion mechanisms of gallium in a silicon matrix

Ab-initio simulations of self-diffusion mechanisms in semiconductors

Activated mechanisms in amorphous silicon: An activation-relaxation-technique study

Activated sampling in complex materials at finite temperature: The properly obeying probability activation-relaxation technique

Aggregating the amyloid Abeta(11-25) peptide into a four-stranded beta-sheet structure.

Aggregation process of Aβ1-40with non-Aβamyloid component ofα-synuclein

Algorithmic developments of the kinetic activation-relaxation technique: Accessing long-time kinetics of larger and more complex systems

All-Atom Stability and Oligomerization Simulations of Polyglutamine Nanotubes with and without the 17-Amino-Acid N-Terminal Fragment of the Huntingtin Protein

Amorphous silicon under mechanical shear deformations: Shear velocity and temperature effects

Amyloid β Protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies

Approximate ab initio calculations of electronic structure of amorphous silicon

Atomistic mechanisms of huntingtin N-terminal fragment insertion on a phospholipid bilayer revealed by molecular dynamics simulations

Binary continuous random networks

Carbon adsorption on and diffusion through the Fe(110) surface and in bulk: Developing a new strategy for the use of empirical potentials in complex material set-ups

Characterization of the stretched-exponential trap-time distributions in one-dimensional coupled map lattices

Charge-dependent migration pathways for the Ga vacancy inGaAs

Coarse-grained protein molecular dynamics simulations

Comment on “Boson peak in amorphous silicon: A numerical study”

Comment on “Mechanism of Void Nucleation and Growth in bcc Fe: Atomistic Simulations at Experimental Time Scales”

Comment on “Role of Lattice Vibrations in Adatom Diffusion”

Comment on “Systematic approach to generate near-perfect periodic continuous random network models: Application to amorphousSi3N4”

Complex folding pathways in a simple beta-hairpin

Computational simulations of the early steps of protein aggregation

Computer models for amorphous silicon hydrides

Computer-simulated model structures for hydrogenated amorphous semiconductors

Contribution of vacancies to relaxation in amorphous materials: A kinetic activation-relaxation technique study

Crystallization of amorphous silicon induced by mechanical shear deformations

Crystallization study of model tetrahedral semiconductors

Dependence of the vibrational spectra of amorphous silicon on the defect concentration and ring distribution

Diffusion mechanisms of C in 100, 110 and 111 Fe surfaces studied using kinetic activation-relaxation technique

Diffusion of point defects in crystalline silicon using the kinetic activation-relaxation technique method

Diffusion properties of Fe–C systems studied by using kinetic activation–relaxation technique

Distinct Dimerization for Various Alloforms of the Amyloid-Beta Protein: Aβ1–40, Aβ1–42, and Aβ1–40(D23N)

Distinct Morphologies for Amyloid Beta Protein Monomer: Aβ1–40, Aβ1–42, and Aβ1–40(D23N)

Distinct helix propensities and membrane interactions of human and rat IAPP(1-19) monomers in anionic lipid bilayers

Dynamical models of hydrogenated amorphous silicon

Dynamics of lennard-jones clusters: A characterization of the activation-relaxation technique

Early oligomerization stages for the non-amyloid component of α-synuclein amyloid

Effect of the disulfide bond on the monomeric structure of human amylin studied by combined Hamiltonian and temperature replica exchange molecular dynamics simulations

Efficient tight-binding Monte Carlo structural sampling of complex materials

Elementary mechanisms governing the dynamics of silica

Energy landscape of relaxed amorphous silicon

Energy landscape of small clusters of self-interstitial dumbbells in iron

Energy landscapes of the monomer and dimer of the Alzheimer's peptide Abeta(1-28).

Enthalpy-entropy compensation of atomic diffusion originates from softening of low frequency phonons

Erratum “Tunable magnetic states in hexagonal boron nitride sheets” [Appl. Phys. Lett. 101, 132405 (2012)]

Erratum: Computer models for amorphous silicon hydrides

Event-Based Relaxation of Continuous Disordered Systems

Evolution of the Potential-Energy Surface of Amorphous Silicon

Exploiting memory in event-based simulations

Exploring energy landscapes of protein folding and aggregation

Exploring high-dimensional energy landscapes

Exploring structural mechanisms in disordered materials using the activation-relaxation technique

Exploring the early steps of aggregation of amyloid-forming peptide KFFE

Exploring the early steps of amyloid peptide aggregation by computers

Exploring the energy landscape of proteins: A characterization of the activation-relaxation technique

Fast bond-transposition algorithms for generating covalent amorphous structures

Finding reaction pathways and transition states: r-ARTn and d-ARTn as an efficient and versatile alternative to string approaches

First stages of silicon oxidation with the activation relaxation technique

Fitting the Stillinger–Weber potential to amorphous silicon

Following atomistic kinetics on experimental timescales with the kinetic Activation–Relaxation Technique

Following the aggregation of amyloid-forming peptides by computer simulations

Free-Energy Landscape of the Amino-Terminal Fragment of Huntingtin in Aqueous Solution

Frustration-Induced Phase Transition in High-Dimensional Deterministic Cellular Automata

Frustration-Induced Phase Transition in High-Dimensional Deterministic Cellular Automata

Gallium self-interstitial relaxation in GaAs: Anab initiocharacterization

High-quality continuous random networks

Holographic multiscale method used with non-biased atomistic forcefields for simulation of large transformations in protein

Identification of Relaxation and Diffusion Mechanisms in Amorphous Silicon

In Silico Assembly of Alzheimer's Aβ16-22Peptide into β-Sheets

Influence of surface vacancy defects on the carburisation of Fe 110 surface by carbon monoxide.

Insights on finite size effects in ab initio study of CO adsorption and dissociation on Fe 110 surface ⬇️

Investigating the kinetics of the formation of a C Cottrell atmosphere around a screw dislocation in bcc iron: a mixed-lattice atomistic kinetic Monte-Carlo analysis

Is Hydrogen Diffusion along Grain Boundaries Fast or Slow? Atomistic Origin and Mechanistic Modeling