List of works by Peter B Becker

A CAF-1-PCNA-mediated chromatin assembly pathway triggered by sensing DNA damage

scientific article

A Defined In Vitro System to Study ATP-Dependent Remodeling of Short Chromatin Fibers

scientific article published on 01 January 2012

A Drosophila cell-free system that senses DNA breaks and triggers phosphorylation signalling

scientific article published on 01 August 2019

A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI.

scientific article published on February 2002

A nucleosome sliding assay for chromatin remodeling factors

scientific article published in January 2004

A role for tuned levels of nucleosome remodeler subunit ACF1 during Drosophila oogenesis

scientific article published on 02 February 2016

A solid-phase approach for the analysis of reconstituted chromatin

scientific article

ACF catalyses chromatosome movements in chromatin fibres

scientific article published on 25 October 2007

ACF1 improves the effectiveness of nucleosome mobilization by ISWI through PHD-histone contacts.

scientific article published on 30 September 2004

ATP-dependent chromatosome remodeling.

scientific article published on April 2008

ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.

scientific article

ATP-dependent nucleosome remodeling

scientific article (publication date: 2002)

ATP-dependent nucleosome remodelling: factors and functions

scientific article published in August 2004

ATP-dependent roX RNA remodeling by the helicase maleless enables specific association of MSL proteins

scientific article published in July 2013

Acetylation increases access of remodelling complexes to their nucleosome targets to enhance initiation of V(D)J recombination.

scientific article

Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling

scientific article published on July 2001

Activation of transcription through histone H4 acetylation by MOF, an acetyltransferase essential for dosage compensation in Drosophila.

scientific article published in February 2000

Active promoters and insulators are marked by the centrosomal protein 190.

scientific article

Active promoters give rise to false positive 'Phantom Peaks' in ChIP-seq experiments.

scientific article

An improved protocol for genomic sequencing and footprinting by ligation-mediated PCR.

scientific article published on June 1993

Analysis of CpG methylation and genomic footprinting at the tyrosine aminotransferase gene: DNA methylation alone is not sufficient to prevent protein binding in vivo

scientific article published on September 1991

Analysis of activator-dependent transcription reinitiation in vitro.

scientific article published in January 2003

Analysis of modulators of chromatin structure in Drosophila

scientific article published on 01 January 1999

Analysis of reconstituted chromatin using a solid-phase approach

scientific article published in January 2009

Assembly of MMTV promoter minichromosomes with positioned nucleosomes precludes NF1 access but not restriction enzyme cleavage.

scientific article

Association and spreading of the Drosophila dosage compensation complex from a discrete roX1 chromatin entry site.

scientific article

Beads on a string-nucleosome array arrangements and folding of the chromatin fiber

scientific article published on 10 February 2020

Beads-on-a-string on a bead: reconstitution and analysis of chromatin on a solid support

scientific article published in January 2015

Biochemical analysis of chromatin structure and function using Drosophila embryo extracts.

scientific article published in May 1997

CHRAC/ACF contribute to the repressive ground state of chromatin

scientific article published on 01 January 2018

CMV promoter mutants with a reduced propensity to productivity loss in CHO cells

scientific article published on 19 November 2015

Cell-free genomics reveal intrinsic, cooperative and competitive determinants of chromatin interactions

scientific article published on 01 July 2021

Cell-free system for assembly of transcriptionally repressed chromatin from Drosophila embryos.

scientific article published on May 1992

Chromatin assembly extracts from Drosophila embryos

scientific article

Chromatin remodeling by GAGA factor and heat shock factor at the hypersensitive Drosophila hsp26 promoter in vitro.

scientific article published on April 1995

Chromatin-remodeling factors: machines that regulate?

scientific article published in June 1998

Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II.

scientific article published in August 1997

Chromodomains are protein-RNA interaction modules

scientific article

Chromosome topology guides the Drosophila Dosage Compensation Complex for target gene activation.

scientific article

Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex

scientific article

Combinatorial Histone Acetylation Patterns Are Generated by Motif-Specific Reactions

scientific article

Combined use of RNAi and quantitative proteomics to study gene function in Drosophila

scientific article published in September 2008

Comment on "Drosophila dosage compensation involves enhanced Pol II recruitment to male X-linked promoters".

scientific article

Computational study of remodeling in a nucleosomal array

scientific article published on 10 August 2015

Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI.

scientific article published on February 2001

Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI

scientific article

Cumulative contributions of weak DNA determinants to targeting the Drosophila dosage compensation complex.

scientific article published on 5 May 2007

DNA sequence and the organization of chromosomal domains.

scientific article published on 04 March 2008

Determination of unknown genomic sequences without cloning

scientific article published on 01 January 1996

Determination of unknown genomic sequences without cloning.

scientific article published in January 2003

Developmental role for ACF1-containing nucleosome remodellers in chromatin organisation

scientific article published on 15 September 2010

Different chromatin interfaces of the Drosophila dosage compensation complex revealed by high-shear ChIP-seq

scientific article

Direct dideoxy sequencing of genomic DNA by ligation-mediated PCR.

scientific article published in February 1994

Dosage compensation and the global re-balancing of aneuploid genomes.

scientific article

Dosage compensation in flies: mechanism, models, mystery.

scientific article

Dosage compensation: the beginning and end of generalization.

scientific article published on January 2007

Drosophila ISWI regulates the association of histone H1 with interphase chromosomes in vivo.

scientific article published on 20 April 2009

Drosophila SWR1 and NuA4 complexes are defined by DOMINO isoforms

scientific article published on 20 May 2020

Drosophila chromatin and transcription

scientific article published on August 1995

Dual regulation of the Drosophila hsp26 promoter in vitro.

scientific article published on July 1995

Electrostatic mechanism of nucleosome spacing.

scientific article published in September 1995

Energy-dependent chromatin accessibility and nucleosome mobility in a cell-free system

scientific article published on May 1995

Factor cooperation for chromosome discrimination in Drosophila

Fluorescence anisotropy assays for analysis of ISWI-DNA and ISWI-nucleosome interactions.

scientific article published on January 2004

Footprinting of DNA-binding proteins in intact cells.

scientific article

Form and function of dosage-compensated chromosomes--a chicken-and-egg relationship.

scientific article published on August 2010

Functional Delineation of Three Groups of the ATP-dependent Family of Chromatin Remodeling Enzymes

scientific article published in Journal of Biological Chemistry

Functional integration of the histone acetyltransferase MOF into the dosage compensation complex

scientific article

Gene regulation by histone H1: new links to DNA methylation.

scientific article

Gene regulation: a finger on the mark.

scientific article

Genome-wide measurement of local nucleosome array regularity and spacing by nanopore sequencing

scholarly article by Sandro Baldi published in August 2018

Genomic footprinting of Drosophila embryo nuclei by linker tag selection LM-PCR.

scientific article published on February 1997

Genomic footprinting reveals cell type-specific DNA binding of ubiquitous factors

scientific article published on 01 November 1987

Global analysis of the relationship between JIL-1 kinase and transcription.

scientific article

Global and specific responses of the histone acetylome to systematic perturbation

scientific article

HMG-D and Histone H1 Interplay during Chromatin Assembly and Early Embryogenesis

scientific article published in Journal of Biological Chemistry

Heat shock factor increases the reinitiation rate from potentiated chromatin templates.

scientific article published on January 1998

Heat shock-regulated transcription in vitro from a reconstituted chromatin template

scientific article published on May 1991

High levels of histone H3 acetylation at the CMV promoter are predictive of stable expression in Chinese hamster ovary cells

scientific article published on 12 April 2016

Histone acetylation facilitates RNA polymerase II transcription of the Drosophila hsp26 gene in chromatin.

scientific article

Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics.

scientific article

HuCHRAC, a human ISWI chromatin remodelling complex contains hACF1 and two novel histone-fold proteins

scientific article

ISWI Is an ATP-Dependent Nucleosome Remodeling Factor

article

ISWI induces nucleosome sliding on nicked DNA.

scientific article published in November 2001

ISWI remodelling of physiological chromatin fibres acetylated at lysine 16 of histone H4.

scientific article

In vitro chromatin remodelling by chromatin accessibility complex (CHRAC) at the SV40 origin of DNA replication

scientific article

In vivo protein-DNA interactions in a glucocorticoid response element require the presence of the hormone

scientific article published on December 1986

Initiation and bidirectional propagation of chromatin assembly from a target site for nucleotide excision repair

scientific article

JASPer controls interphase histone H3S10 phosphorylation by chromosomal kinase JIL-1 in Drosophila

scientific article published on 25 November 2019

Life span extension by targeting a link between metabolism and histone acetylation in Drosophila

scientific article published on 18 January 2016

Lifting a chromosome: dosage compensation in Drosophila melanogaster

scientific article published on June 2004

Loss of nucleosome remodelers CHRAC/ACF does not sensitize early Drosophila embryos to X-rays

scientific article published on 30 July 2020

MSL2 combines sensor and effector functions in homeostatic control of the Drosophila dosage compensation machinery.

scientific article published on 18 October 2012

Modifications of the histone N-terminal domains. Evidence for an "epigenetic code"?

scientific article

Modulation of ISWI function by site-specific histone acetylation

scientific article

Molecular cloning and expression of a hexameric Drosophila heat shock factor subject to negative regulation

scientific article

Nonradioactive, solid-phase DNase I footprints analyzed on an A.L.F. DNA Sequencer

scientific article published on 01 September 1994

Nucleosome binding by the bromodomain and PHD finger of the transcriptional cofactor p300.

scientific article published in April 2004

Nucleosome dynamics and epigenetic stability.

scientific article published on September 2010

Nucleosome mobilization and positioning by ISWI-containing chromatin-remodeling factors

scientific article

Nucleosome movement by CHRAC and ISWI without disruption or trans-displacement of the histone octamer.

scientific article

Nucleosome remodeler SNF2L suppresses cell proliferation and migration and attenuates Wnt signaling

scientific article

Nucleosome remodelers on track

scientific article

Nucleosome remodeling and epigenetics.

scientific article published on September 2013

Nucleosome remodeling: one mechanism, many phenomena?

scientific article published on March 2004

Nucleosome sliding mechanisms: new twists in a looped history.

scientific article published on September 2013

Nucleosome sliding: facts and fiction

scientific article

Phosphorylation of SU(VAR)3-9 by the chromosomal kinase JIL-1.

scientific article

Physical and functional association of SU(VAR)3-9 and HDAC1 in Drosophila

scientific article

PionX sites mark the X chromosome for dosage compensation.

scientific article

Preparation of Chromatin Assembly Extracts from Preblastoderm Drosophila Embryos

scientific article published on 01 January 2009

Preparation of chromatin assembly extracts from preblastoderm Drosophila embryos.

scientific article

Probing the conformation of the ISWI ATPase domain with genetically encoded photoreactive crosslinkers and mass spectrometry

scientific article published on 13 December 2011

Progressive dosage compensation during Drosophila embryogenesis is reflected by gene arrangement

scientific article published on 09 July 2019

Prothymosin alpha modulates the interaction of histone H1 with chromatin

scientific article

RNA polymerase I transcription on nucleosomal templates: the transcription termination factor TTF-I induces chromatin remodeling and relieves transcriptional repression

scientific article

Ran binds to chromatin by two distinct mechanisms.

scientific article

Rapid purification of recombinant histones

scientific article

Reconstitution and analysis of hyperacetylated chromatin.

scientific article

Reconstitution of human beta-globin locus control region hypersensitive sites in the absence of chromatin assembly.

scientific article published on April 2001

Reconstitution of hyperacetylated, DNase I-sensitive chromatin characterized by high conformational flexibility of nucleosomal DNA.

scientific article published in February 1998

Recruitment of the nucleolar remodeling complex NoRC establishes ribosomal DNA silencing in chromatin

scientific article published on February 2004

Regulation of higher-order chromatin structures by nucleosome-remodelling factors.

scientific article

Role for hACF1 in the G2/M damage checkpoint

scientific article

Roles of long, non-coding RNA in chromosome-wide transcription regulation: lessons from two dosage compensation systems.

scientific article published on 08 January 2012

Sequence-specific targeting of Drosophila roX genes by the MSL dosage compensation complex

scientific article published on April 2003

Site-specific acetylation of ISWI by GCN5.

scientific article

Soft skills turned into hard facts: nucleosome remodelling at developmental switches.

scientific article published on 07 April 2010

Solid phase DNase I footprinting: quick and versatile

scientific article published on April 1994

Solid phase technology improves coupled gel shift/footprinting analysis

scientific article published on January 1997

Splice variants of the SWR1-type nucleosome remodeling factor Domino have distinct functions during Drosophila melanogaster oogenesis

scientific article published in September 2016

Stable chromosomal association of MSL2 defines a dosage-compensated nuclear compartment

scientific article published on 12 November 2005

Structural and functional analysis of chromatin assembled from defined histones.

scientific article published in August 1998

Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation.

scientific article

Structure of the RNA Helicase MLE Reveals the Molecular Mechanisms for Uridine Specificity and RNA-ATP Coupling

scientific article

Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1,2 of Drosophila helicase Maleless

scientific article published on 01 May 2019

Structure-function analysis of the RNA helicase maleless.

scientific article

TTF-I determines the chromatin architecture of the active rDNA promoter

scientific article

Targeting determinants of dosage compensation in Drosophila

scientific article

The ATPase domain of ISWI is an autonomous nucleosome remodeling machine

scientific article published on 2 December 2012

The DNA binding CXC domain of MSL2 is required for faithful targeting the Dosage Compensation Complex to the X chromosome

scientific article

The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding

scientific article published on December 2002

The Drosophila MSL complex activates the transcription of target genes.

scientific article

The Drosophila polycomb protein interacts with nucleosomal core particles In vitro via its repression domain

scientific article

The MOF-containing NSL complex associates globally with housekeeping genes, but activates only a defined subset

scientific article published on 27 October 2011

The MRG domain mediates the functional integration of MSL3 into the dosage compensation complex.

scientific article

The activation potential of MOF is constrained for dosage compensation

scientific article published in June 2010

The architecture of the heat-inducible Drosophila hsp27 promoter in nuclei.

scientific article published in February 1996

The bifunctional protein DCoH modulates interactions of the homeodomain transcription factor HNF1 with nucleic acids 1 1Edited by M. Yaniv

The chromatin accessibility complex: chromatin dynamics through nucleosome sliding.

scientific article

The chromosomal high-affinity binding sites for the Drosophila dosage compensation complex.

scientific article

The dMi-2 chromodomains are DNA binding modules important for ATP-dependent nucleosome mobilization

scientific article published on May 2002

The dosage compensation complex shapes the conformation of the X chromosome in Drosophila

scientific article

The effect of nucleosome phasing sequences and DNA topology on nucleosome spacing.

scientific article

The establishment of active promoters in chromatin

scientific article published on August 1994

The glutamine-rich domain of the Drosophila GAGA factor is necessary for amyloid fibre formation in vitro, but not for chromatin remodelling

scientific article published in January 1999

The histone H4 acetyltransferase MOF uses a C2HC zinc finger for substrate recognition

scientific article

The histone fold subunits of Drosophila CHRAC facilitate nucleosome sliding through dynamic DNA interactions.

scientific article published on November 2005

The histone-fold protein CHRAC14 influences chromatin composition in response to DNA damage

scientific article published on 3 April 2014

The many colours of chromodomains.

scientific article published on February 2004

The novel transcription factor e(y)2 interacts with TAF(II)40 and potentiates transcription activation on chromatin templates

scientific article

The variant histone H2A.V of Drosophila--three roles, two guises.

scientific article published on 04 April 2013

Tissue-specific DNaseI hypersensitive sites in the 5'-flanking sequences of the tryptophan oxygenase and the tyrosine aminotransferase genes.

scientific article published on September 1984

Tramtrack69 interacts with the dMi-2 subunit of the Drosophila NuRD chromatin remodelling complex

scientific article published on 21 November 2001

Transcription factor-mediated chromatin remodelling: mechanisms and models.

scientific article published on August 1995

Transcription modulation chromosome-wide: universal features and principles of dosage compensation in worms and flies.

scientific article published on April 2011

Transcriptional repression by nucleosomes but not H1 in reconstituted preblastoderm Drosophila chromatin

scientific article

Translational control of dosage compensation in Drosophila by Sex-lethal: cooperative silencing via the 5' and 3' UTRs of msl-2 mRNA is independent of the poly(A) tail

scientific article published on November 1999

Two histone fold proteins, CHRAC-14 and CHRAC-16, are developmentally regulated subunits of chromatin accessibility complex (CHRAC)

scientific article

Two-step synergism between the progesterone receptor and the DNA-binding domain of nuclear factor 1 on MMTV minichromosomes.

scientific article published in July 1999

UNR facilitates the interaction of MLE with the lncRNA roX2 during Drosophila dosage compensation

scientific article published on 27 August 2014

Ubiquitylation of the acetyltransferase MOF in Drosophila melanogaster

scientific article

Wolfram Hörz 1944-2005.

scientific article published in January 2006

dMi-2 and ISWI chromatin remodelling factors have distinct nucleosome binding and mobilization properties

scientific article

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