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List of works by Nikolay Zenkin

A link between transcription fidelity and pausing in vivo.

scientific article published on 10 January 2017

A new Bacillus cereus DNA-binding protein, HlyIIR, negatively regulates expression of B. cereus haemolysin II.

scientific article

A new basal promoter element recognized by RNA polymerase core enzyme ⬇️

scientific article published on July 26, 2011

Ancient RNA stems that terminate transcription.

scientific article published on 05 March 2014

Antibiotic streptolydigin requires noncatalytic Mg2+ for binding to RNA polymerase.

scientific article

Bacterial global regulators DksA/ppGpp increase fidelity of transcription

scientific article published on 20 January 2015

Bacteriophage Xp10 anti-termination factor p7 induces forward translocation by host RNA polymerase.

scientific article

Central role of the RNA polymerase trigger loop in intrinsic RNA hydrolysis.

scientific article

Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae

scientific article published on 4 September 2014

Controlled interplay between trigger loop and Gre factor in the RNA polymerase active centre

scientific article published on 25 January 2011

Deep sequencing approaches for the analysis of prokaryotic transcriptional boundaries and dynamics.

scientific article published on 20 April 2017

Factor-independent transcription pausing caused by recognition of the RNA-DNA hybrid sequence

scientific article published on 29 November 2011

Hypothesis: emergence of translation as a result of RNA helicase evolution.

scientific article

In vitro experimental system for analysis of transcription-translation coupling.

scientific article published on 30 December 2011

Kanglemycin A Can Overcome Rifamycin Resistance Caused by ADP-Ribosylation by Arr Protein

scientific article published on 04 October 2021

Mapping of RNA polymerase residues that interact with bacteriophage Xp10 transcription antitermination factor p7.

scientific article published on 25 October 2007

Mechanism of eukaryotic RNA polymerase III transcription termination

scientific article published in June 2013

Methodology for the analysis of transcription and translation in transcription-coupled-to-translation systems in vitro

scientific article

Methods for the assembly and analysis of in vitro transcription-coupled-to-translation systems

scientific article published on January 2015

Misincorporation by RNA polymerase is a major source of transcription pausing in vivo

scientific article

Mitochondrial translation initiation machinery: conservation and diversification

scientific article

Mode of Action of Kanglemycin A, an Ansamycin Natural Product that Is Active against Rifampicin-Resistant Mycobacterium tuberculosis

article

Molecular mechanism of bacterial persistence by HipA.

scientific article

Molecular mechanism of transcription inhibition by peptide antibiotic Microcin J25.

scientific article published in June 2004

Multiple active centers of multi-subunit RNA polymerases ⬇️

scientific article published on May 1, 2012

Multiple personalities of the RNA polymerase active centre

scientific article published on 24 April 2014

New Insights into the Functions of Transcription Factors that Bind the RNA Polymerase Secondary Channel

scientific article

Optimized delivery of fluorescently labeled proteins in live bacteria using electroporation

scientific article

Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors. ⬇️

scientific article published on 14 March 2018

Protein biosynthesis in mitochondria

scientific article published on August 2013

RNA polymerase -the third class of primases.

scientific article published on August 2008

RNA secondary structure-dependent termination of transcription

scientific article

Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element

scientific article published on February 2007

Regulated communication between the upstream face of RNA polymerase and the beta' subunit jaw domain

scientific article published on 7 October 2004

Remodeling of the sigma70 subunit non-template DNA strand contacts during the final step of transcription initiation.

scientific article

Ribonucleoprotein particles of bacterial small non-coding RNA IsrA (IS61 or McaS) and its interaction with RNA polymerase core may link transcription to mRNA fate

scientific article

Single-peptide DNA-dependent RNA polymerase homologous to multi-subunit RNA polymerase

scientific article published on 6 June 2017

Stepwise mechanism for transcription fidelity

scientific article

Structural Reassignment and Absolute Stereochemistry of Madurastatin C1 (MBJ-0034) and the Related Aziridine Siderophores: Madurastatins A1, B1, and MBJ-0035. ⬇️

scientific article

Structural basis of transcription inhibition by antibiotic streptolydigin.

scientific article

Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase.

scientific article

Tagetitoxin inhibits transcription by stabilizing pre-translocated state of the elongation complex.

scientific article published on 9 August 2013

The Fic protein Doc uses an inverted substrate to phosphorylate and inactivate EF-Tu

scientific article published on 20 October 2013

The many faces of Fic: structural and functional aspects of Fic enzymes

scientific article published on 05 February 2014

The mechanism of DNA replication primer synthesis by RNA polymerase

scientific article published on 01 February 2006

The role of RNA polymerase sigma subunit in promoter-independent initiation of transcription.

scholarly article

The sigma 70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription

scientific article

Transcript assisted phosphodiester bond hydrolysis by eukaryotic RNA polymerase II

scientific article published on September 2013

Transcript-assisted transcriptional proofreading

scientific article

Transcription fidelity and its roles in the cell.

scientific article

Transcription. Response to Comment on "Mechanism of eukaryotic RNA polymerase III transcription termination".

scientific article

Two distinct pathways of RNA polymerase backtracking determine the requirement for the Trigger Loop during RNA hydrolysis

scientific article published on 01 September 2021

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