List of works by Tadashi Imanishi

A New HLA-A9 subtype lacking the Bw4 epitope

scientific article published on 01 March 1995

A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing

scientific article

A prioritization analysis of disease association by data-mining of functional annotation of human genes

scientific article

A web tool for comparative genomics: G-compass

article

Alternative splicing in human transcriptome: functional and structural influence on proteins.

scientific article

Association between insulin resistance and plasma amino acid profile in non-diabetic Japanese subjects

scientific article published on 21 April 2015

CIPRO 2.5: Ciona intestinalis Protein Database - a unique integrated repository of large-scale omics data, bioinformatic analyses, and curated annotation, with ability for user rating and comments.

scientific article published on 11 October 2010

CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality

scientific article

Cancer-related mutations in BRCA1-BRCT cause long-range structural changes in protein-protein binding sites: a molecular dynamics study.

scientific article published in January 2007

Cbfβ2 deficiency preserves Langerhans cell precursors by lack of selective TGFβ receptor signaling.

scientific article published on 16 August 2017

Characteristic [Beta]-Globin Gene Cluster Haplotypes of Evenkis and Oroqens in North China

article

Characteristics of the β-Globin Gene Cluster Haplotypes of Three Han Chinese Populations at Beijing, Xi’an, and Kunming as Compared with Those of Other Asian Populations

article

Comparative genome analysis of three eukaryotic parasites with differing abilities to transform leukocytes reveals key mediators of Theileria-induced leukocyte transformation

scientific article

Comparative genomics of bidirectional gene pairs and its implications for the evolution of a transcriptional regulation system

scientific article

Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence

scientific article (publication date: 24 June 2003)

Comprehensive Serum Glycopeptide Spectra Analysis (CSGSA): A Potential New Tool for Early Detection of Ovarian Cancer

scientific article published on 27 April 2019

Computational analysis and functional expression of ancestral copepod luciferase

scientific article published on 23 July 2013

Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana

scientific article

Detection of pathogenic bacteria in the blood from sepsis patients using 16S rRNA gene amplicon sequencing analysis

scientific article published in PLoS ONE

Determination of HLA class II alleles by genotyping in a Manchu population in the northern part of China and its relationship with Han and Japanese populations

article

Distribution and effects of nonsense polymorphisms in human genes

scientific article

Distribution of HLA antigens and haplotypes in the Buryat population of Siberia

scientific article published on February 1995

Empyema associated with Campylobacter curvus infection.

scientific article published on 13 April 2017

Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees

scientific article

Evolutionary growth process of highly conserved sequences in vertebrate genomes.

scientific article published on 9 May 2012

Evolutionary motif and its biological and structural significance

scientific article published on 01 January 1997

Evolutionary significance of intra-genome duplications on human chromosomes

scientific article published on 01 December 1997

Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes

article

Full-length transcriptome-based H-InvDB throws a new light on chromosome-centric proteomics.

scientific article

G-compass: a web-based comparative genome browser between human and other vertebrate genomes

scientific article published on 21 October 2009

Gene frequencies and haplotypic associations within the HLA region in 916 unrelated Japanese individuals

scientific article published in September 1994

Genetic isolates in East Asia: a study of linkage disequilibrium in the X chromosome.

scientific article published on 21 June 2002

Genetic relationships among Japanese, northern Han, Hui, Uygur, Kazakh, Greek, Saudi Arabian, and Italian populations based on allelic frequencies at four VNTR (D1S80, D4S43, COL2A1, D17S5) and one STR (ACTBP2) loci

scientific article

H-DBAS: alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational

scientific article

H-DBAS: human-transcriptome database for alternative splicing: update 2010

scientific article

H-InvDB in 2009: extended database and data mining resources for human genes and transcripts

scientific article

H-InvDB in 2013: an omics study platform for human functional gene and transcript discovery

scientific article

Human Contamination in Public Genome Assemblies

scientific article

Human short tandem repeat identification using a nanopore-based DNA sequencer: a pilot study

scientific article published on 24 October 2019

Hyperlink Management System and ID Converter System: enabling maintenance-free hyperlinks among major biological databases.

scientific article published on 19 May 2009

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

scientific article

Investigation of protein functions through data-mining on integrated human transcriptome database, H-Invitational database (H-InvDB).

scientific article

Isolation and characterization of a pig major histocompatibility complex (SLA) class II DNA cDNA clone

scientific article published in September 1999

Isolation and characterization of cDNA clones for Japanese quail (Coturnix japonica) major histocompatibility complex (MhcCoja) class I molecules

scientific article published in January 1995

Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs

scientific article

Length variation of CAG/CAA triplet repeats in 50 genes among 16 inbred mouse strains

scientific article

Low conservation and species-specific evolution of alternative splicing in humans and mice: comparative genomics analysis using well-annotated full-length cDNAs

scientific article published on 05 October 2008

Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome.

scientific article published on 20 April 2007

Mutation patterns for two flaviviruses: hepatitis C virus and GB virus C/hepatitis G virus

scientific article published in May 1999

Nanopore-based single molecule sequencing of the D4Z4 array responsible for facioscapulohumeral muscular dystrophy.

scientific article published in November 2017

Notes on the maximum likelihood estimation of haplotype frequencies.

scientific article published in May 2004

Novel algorithm for automated genotyping of microsatellites

scientific article

Nucleotide Archival Format (NAF) enables efficient lossless reference-free compression of DNA sequences

scientific article published on 01 October 2019

Patterns of nucleotide substitutions inferred from the phylogenies of the class I major histocompatibility complex genes

scientific article

Prediction of protein-destabilizing polymorphisms by manual curation with protein structure

scientific article

RAvariome: a genetic risk variants database for rheumatoid arthritis based on assessment of reproducibility between or within human populations

scientific article

Rapid bacterial identification by direct PCR amplification of 16S rRNA genes using the MinION™ nanopore sequencer

article

Reconstructing the demographic history of the human lineage using whole-genome sequences from human and three great apes

scientific article (publication date: 2012)

Selection pressure on human STR loci and its relevance in repeat expansion disease.

scientific article published on 11 June 2016

Sequence Compression Benchmark (SCB) database-A comprehensive evaluation of reference-free compressors for FASTA-formatted sequences

scientific article published on 01 July 2020

Sequences of four splits of HLA-A10 group. Implications for serologic cross-reactivities and their evolution

scientific article published in March 1994

Systematic survey of non-retroviral virus-like elements in eukaryotic genomes

scientific article published on 6 February 2018

TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB.

scientific article

The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts

scientific article

The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms

scientific article

The Rice Annotation Project Database (RAP-DB): 2008 update

scientific article

The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information

scientific article

The efficacy and further functional advantages of random-base molecular barcodes for absolute and digital quantification of nucleic acid molecules

scientific article published on 19 October 2017

The evolutionary relationship between gene duplication and alternative splicing

scientific article published on 12 September 2008

The evolutionary study of small RNA-directed gene silencing pathways by investigating RNase III enzymes

scientific article published on 31 January 2009

Towards BioDBcore: a community-defined information specification for biological databases

scientific article

Towards BioDBcore: a community-defined information specification for biological databases

scientific article (publication date: 2011)

Two different classes of co-occurring motif pairs found by a novel visualization method in human promoter regions

scientific article

Utility of Comprehensive Serum Glycopeptide Spectra Analysis (CSGSA) for the Detection of Early Stage Epithelial Ovarian Cancer

scientific article published on 21 August 2020

VaDE: a manually curated database of reproducible associations between various traits and human genomic polymorphisms

scientific article

VarySysDB: a human genetic polymorphism database based on all H-InvDB transcripts

scientific article published on 25 October 2008

Whole genome association study of rheumatoid arthritis using 27 039 microsatellites

scientific article

Paulina is supported by:

About Paulina

Help