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List of works by In-Geol Choi

3,6-Anhydro-L-galactonate cycloisomerase from Vibrio sp. strain EJY3: crystallization and X-ray crystallographic analysis.

scientific article

A novel agarolytic β-galactosidase acts on agarooligosaccharides for complete hydrolysis of agarose into monomers

scientific article

Acetate-assisted increase of butyrate production by Eubacterium limosum KIST612 during carbon monoxide fermentation.

scientific article

Altererythrobacter lutimaris sp. nov., a marine bacterium isolated from a tidal flat and reclassification of Altererythrobacter deserti, Altererythrobacter estronivorus and Altererythrobacter muriae as Tsuneonella deserti comb. nov., Croceicoccus…

scholarly article published in 2021

An expansin from the marine bacterium Hahella chejuensis acts synergistically with xylanase and enhances xylan hydrolysis

scientific article published on 29 September 2013

An expansin-like protein from Hahella chejuensis binds cellulose and enhances cellulase activity

scientific article published on 4 March 2010

Analysis of survival rates and cellular fatty acid profiles of Listeria monocytogenes treated with supercritical carbon dioxide under the influence of cosolvents

scientific article published on 16 May 2008

Aqueous ammonia pretreatment of oil palm empty fruit bunches for ethanol production

scientific article published on 22 July 2011

Aqueous ammonia pretreatment, saccharification, and fermentation evaluation of oil palm fronds for ethanol production

scientific article published on 30 May 2012

Binding characteristics of a bacterial expansin (BsEXLX1) for various types of pretreated lignocellulose

scientific article published on 29 September 2012

Biological pretreatment of rice straw by fermenting with Dichomitus squalens

scientific article published on 3 March 2010

Calcium Carbonate Precipitation by Bacillus and Sporosarcina Strains Isolated from Concrete and Analysis of the Bacterial Community of Concrete

scientific article published on 23 December 2015

Cellotriose-hydrolyzing activity conferred by truncating the carbohydrate-binding modules of Cel5 from Hahella chejuensis

scientific article published on 19 October 2016

Characteristics of the binding of a bacterial expansin (BsEXLX1) to microcrystalline cellulose

scientific article published on 18 September 2012

Characterization of a recombinant endo-type alginate lyase (Alg7D) from Saccharophagus degradans

scientific article published on 04 March 2012

Characterization of the biochemical properties of recombinant Xyn10C from a marine bacterium, Saccharophagus degradans 2-40

scientific article published on 25 January 2016

Chemicals that modulate stem cell differentiation

scholarly article

Chryseobacterium cucumeris sp. nov., an endophyte isolated from cucumber (Cucumis sativus L.) root and emended description of Chryseobacterium arthrosphaerae

scientific article

Cloning and expression of superoxide dismutase from Aquifex pyrophilus, a hyperthermophilic bacterium

scientific article published in April 1997

Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613

scientific article published on 03 September 2019

Construction of Uniform Monolayer- and Orientation-Tunable Enzyme Electrode by a Synthetic Glucose Dehydrogenase without Electron-Transfer Subunit via Optimized Site-Specific Gold-Binding Peptide Capable of Direct Electron Transfer

scientific article published on 15 August 2018

Correction to: Soil environment reshapes microbiota of laboratory-maintained Collembola during host development

scientific article published in 2022

Crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase suggests emergence of novel substrate specificity in the enolase superfamily

scientific article

Crystal structure analysis of a bacterial aryl acylamidase belonging to the amidase signature enzyme family

scientific article

Crystal structure of a key enzyme in the agarolytic pathway, α-neoagarobiose hydrolase from Saccharophagus degradans 2–40 ⬇️

scientific article published on July 23, 2011

Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution

scientific article

Crystallization and preliminary X-ray analysis of neoagarobiose hydrolase from Saccharophagus degradans 2-40.

scientific article

Depolymerization of alginate into a monomeric sugar acid using Alg17C, an exo-oligoalginate lyase cloned from Saccharophagus degradans 2-40.

scientific article

Draft Genome Sequence of Chryseobacterium sp. Strain GSE06, a Biocontrol Endophytic Bacterium Isolated from Cucumber (Cucumis sativus).

scientific article published on 16 June 2016

Draft Genome Sequence of Phosphate-Solubilizing Chryseobacterium sp. Strain ISE14, a Biocontrol and Plant Growth-Promoting Rhizobacterium Isolated from Cucumber.

scientific article

Draft Genome Sequence of a Biocontrol Rhizobacterium, Chryseobacterium kwangjuense Strain KJ1R5, Isolated from Pepper (Capsicum annuum).

scientific article published on 21 April 2016

Draft Genome Sequence of an Acid-Tolerant Yeast, Candida zemplinina NP2, a Potential Producer of Organic Acids.

scientific article published on 28 September 2017

Draft Genome Sequences of Bacillus megaterium KU143, Microbacterium testaceum KU313, and Pseudomonas protegens AS15, Isolated from Stored Rice Grains.

scientific article

Draft Genome Sequences of Chryseobacterium artocarpi UTM-3T and Chryseobacterium contaminans C26T, Isolated from Rhizospheres, and Chryseobacterium arthrosphaerae CC-VM-7T, Isolated from the Feces of a Pill Millipede.

scientific article published on 20 October 2016

Draft Genome Sequences of Chryseobacterium lactis NCTC11390T Isolated from Milk, Chryseobacterium oncorhynchi 701B-08T from Rainbow Trout, and Chryseobacterium viscerum 687B-08T from Diseased Fish.

scientific article

Draft Genome Sequences of Two Ureolytic Bacteria Isolated from Concrete Block Waste

scientific article published on 4 August 2016

Effect of propofol on calcium homeostasis in hypoxia-reoxygenated neonatal rat cardiomyocytes

scientific article published on 17 July 2008

Energy Conservation Model Based on Genomic and Experimental Analyses of a Carbon Monoxide-Utilizing, Butyrate-Forming Acetogen, Eubacterium limosum KIST612

scientific article

Enhanced tolerance of Saccharomyces cerevisiae to multiple lignocellulose-derived inhibitors through modulation of spermidine contents

scientific article published on 25 February 2015

Enzymatic liquefaction of agarose above the sol-gel transition temperature using a thermostable endo-type β-agarase, Aga16B.

scientific article published on 24 September 2016

Enzymatic production of 3,6-anhydro-L-galactose from agarose and its purification and in vitro skin whitening and anti-inflammatory activities.

scientific article

Ethanol production from oil palm trunks treated with aqueous ammonia and cellulase

scientific article published on 01 May 2011

Ethanol production from rice straw using optimized aqueous-ammonia soaking pretreatment and simultaneous saccharification and fermentation processes.

scientific article published on 8 May 2009

Evolution of protein structural classes and protein sequence families.

scientific article

Exploring the human diseasome: the human disease network

scientific article

Extremely thermostable serine-type protease from Aquifex pyrophilus. Molecular cloning, expression, and characterization

scientific article published in January 1999

Feasibility test of utilizing Saccharophagus degradans 2-40(T) as the source of crude enzyme for the saccharification of lignocellulose

scientific article

FunGAP: Fungal Genome Annotation Pipeline Using Evidence-based Gene Model Evaluation

scientific article

Functional cell surface display and controlled secretion of diverse Agarolytic enzymes by Escherichia coli with a novel ligation-independent cloning vector based on the autotransporter YfaL.

scientific article published on 17 February 2012

Functional characterization of a bacterial expansin from Bacillus subtilis for enhanced enzymatic hydrolysis of cellulose

scientific article published in April 2009

Fungal pretreatment of lignocellulose by Phanerochaete chrysosporium to produce ethanol from rice straw

scientific article

Genome Analysis of a Zygomycete Fungus Choanephora cucurbitarum Elucidates Necrotrophic Features Including Bacterial Genes Related to Plant Colonization

scientific article published on 16 January 2017

Genome sequence of Janthinobacterium sp. strain PAMC 25724, isolated from alpine glacier cryoconite

scientific article published on April 2012

Genome sequence of Vibrio sp. strain EJY3, an agarolytic marine bacterium metabolizing 3,6-anhydro-L-galactose as a sole carbon source.

scientific article

Genome sequence of a novel member of the genus Psychrobacter isolated from Antarctic soil

scientific article

Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation.

scientific article published on 15 July 2015

Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032.

scientific article

Genomic and transcriptomic perspectives on mycoremediation of polycyclic aromatic hydrocarbons

scientific article published on 22 June 2020

Genomic discovery of the hypsin gene and biosynthetic pathways for terpenoids in Hypsizygus marmoreus

article

Genomics of wood-degrading fungi

scientific article published on 20 May 2014

Global extent of horizontal gene transfer

scholarly article

Global metabolic profiling of plant cell wall polysaccharide degradation by Saccharophagus degradans

scientific article published in February 2010

Global metabolite profiling of agarose degradation by Saccharophagus degradans 2-40.

scientific article published on 6 March 2010

High temperature and low acid pretreatment and agarase treatment of agarose for the production of sugar and ethanol from red seaweed biomass

scientific article published on 16 March 2013

Improved enzymatic hydrolysis yield of rice straw using electron beam irradiation pretreatment

scientific article

Interaction and assembly of HBV structural proteins: novel target sites of anti-HBV agents.

scientific article published on September 2007

Local feature frequency profile: a method to measure structural similarity in proteins

scientific article

Loss of Dfg5 glycosylphosphatidylinositol-anchored membrane protein confers enhanced heat tolerance in Saccharomyces cerevisiae

scientific article published on 8 October 2014

Maribacter litoralis sp. nov. a marine bacterium isolated from seashore

scientific article published on 17 September 2018

Model-Based Complete Enzymatic Production of 3,6-Anhydro-l-galactose from Red Algal Biomass

scientific article published on 26 June 2018

Modification of mesenchymal stem cells for cardiac regeneration.

scientific article published on March 2010

Molecular characterization of a novel bacterial aryl acylamidase belonging to the amidase signature enzyme family

scientific article

Muricauda ochracea sp. nov., isolated from a tidal flat in the Republic of Korea

scientific article published on 28 July 2020

Oceanimonas marisflavi sp. nov., a polycyclic aromatic hydrocarbon-degrading marine bacterium

scientific article published on 24 July 2018

Olfactory receptor 544 reduces adiposity by steering fuel preference toward fats

scientific article

Optimal production of a novel endo-acting beta-1,4-xylanase cloned from Saccharophagus degradans 2-40 into Escherichia coli BL21(DE3).

scientific article published on 29 July 2009

Optimization of synergism of a recombinant auxiliary activity 9 from Chaetomium globosum with cellulase in cellulose hydrolysis

scientific article published on 5 May 2015

Overexpression and molecular characterization of Aga50D from Saccharophagus degradans 2-40: an exo-type beta-agarase producing neoagarobiose

scientific article published on 03 October 2009

Preparation of a ribosomally synthesized fungal peptide toxin precursor and its in-vitro cyclization

scientific article published on 16 December 2019

Pretreatment and saccharification of red macroalgae to produce fermentable sugars

scientific article published on 05 August 2015

Previously undescribed plasmids recovered from activated sludge confer tetracycline resistance and phenotypic changes to Acinetobacter oleivorans DR1.

scientific article published on 13 December 2013

Production of p-acetaminophenol by whole-cell catalysis using Escherichia coli overexpressing bacterial aryl acylamidase.

scientific article published in December 2011

Prokaryotic Contig Annotation Pipeline Server: Web Application for a Prokaryotic Genome Annotation Pipeline Based on the Shiny App Package.

scientific article

Protein conformational space in higher order phi-Psi maps

scientific article

Rapid and robust enzymatic sensing and quantitation of 3,6-Anhydro-L-galactose in a heterogeneous sugar mixture

scientific article published on 28 April 2017

Red macroalgae as a sustainable resource for bio-based products

scientific article

SNP-Based Genetic Linkage Map and Quantitative Trait Locus Mapping Associated with the Agronomically Important Traits of <i>Hypsizygus marmoreus</i>

scientific article published in 2021

Significant enhancement of direct electric communication across enzyme-electrode interface via nano-patterning of synthetic glucose dehydrogenase on spatially tunable gold nanoparticle (AuNP)-modified electrode

scientific article published on 13 October 2018

Soil environment reshapes microbiota of laboratory-maintained Collembola during host development

scientific article published on 05 April 2022

Structural genomics of minimal organisms and protein fold space

scientific article published in January 2005

Structure of OsmC from Escherichia coli: a salt-shock-induced protein

scientific article published on 21 April 2004

Structure-based functional inference in structural genomics.

scientific article

Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center.

scientific article

Synergistic proteins for the enhanced enzymatic hydrolysis of cellulose by cellulase.

scientific article

The complete enzymatic saccharification of agarose and its application to simultaneous saccharification and fermentation of agarose for ethanol production

scientific article published on 06 December 2011

The novel catabolic pathway of 3,6-anhydro-L-galactose, the main component of red macroalgae, in a marine bacterium

scientific article published on 29 September 2014

Transcriptome analysis and anaerobic C4 -dicarboxylate transport in Actinobacillus succinogenes.

scientific article published on 12 December 2017

Unusual genome expansion and transcription suppression in ectomycorrhizal Tricholoma matsutake by insertions of transposable elements

scientific article published on 24 January 2020

Zobellella maritima sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium, isolated from beach sediment

scientific article published on 21 May 2018

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