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List of works by Claudia Angelini

A Bayesian approach to estimation and testing in time-course microarray experiments

scientific article

A Macroscopic Mathematical Model for Cell Migration Assays Using a Real-Time Cell Analysis ⬇️

scientific article

A phenotypic rescue approach identifies lineage regionalization defects in a mouse model of DiGeorge syndrome

scientific article published in 2022

Advancements in RNASeqGUI towards a Reproducible Analysis of RNA-Seq Experiments

scientific article

An atlas of gene expression and gene co-regulation in the human retina.

scientific article published on 27 May 2016

AnaLysis of Expression on human chromosome 21, ALE-HSA21: a pilot integrated web resource

scientific article published on 25 February 2014

BATS: a Bayesian user-friendly software for analyzing time series microarray experiments

scientific article

Bacterial IAA-Delivery into Medicago Root Nodules Triggers a Balanced Stimulation of C and N Metabolism Leading to a Biomass Increase

scientific article published on 29 September 2019

Bayesian Models for the Multi-sample Time-Course Microarray Experiments

Benchmark and Parameter Sensitivity Analysis of Single-Cell RNA Sequencing Clustering Methods

scientific article published on 11 December 2019

Cancer Markers Selection Using Network-Based Cox Regression: A Methodological and Computational Practice.

scientific article published on 17 June 2016

Clustering time-course microarray data using functional Bayesian infinite mixture model

Combining Pathway Identification and Breast Cancer Survival Prediction via Screening-Network Methods.

scientific article

Compression of AVHRR images by wavelet packets

Computational approaches for isoform detection and estimation: good and bad news.

scientific article

Cripto is essential to capture mouse epiblast stem cell and human embryonic stem cell pluripotency.

scientific article published on 02 September 2016

Distinct Antigen Delivery Systems Induce Dendritic Cells' Divergent Transcriptional Response: New Insights from a Comparative and Reproducible Computational Analysis.

scientific article published on 25 February 2017

Exploring the Interaction between the SWI/SNF Chromatin Remodeling Complex and the Zinc Finger Factor CTCF

scientific article published on 25 November 2020

HiCeekR: A Novel Shiny App for Hi-C Data Analysis

scientific article published on 04 November 2019

High Biodiversity Arises from the Analyses of Morphometric, Biochemical and Genetic Data in Ancient Olive Trees of South of Italy

scientific article published on 22 August 2019

ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing.

scientific article

Identification of previously unrecognized predisposing factors for ankylosing spondylitis from analysis of HLA–B27 extended haplotypes in sardinia

article

Impairment of circulating endothelial progenitors in Down syndrome

scientific article published on 13 September 2010

Interactome mapping defines BRG1, a component of the SWI/SNF chromatin remodeling complex, as a new partner of the transcriptional regulator CTCF

scientific article published on 20 November 2018

Is this the right normalization? A diagnostic tool for ChIP-seq normalization.

scientific article published on 9 May 2015

L-Proline induces a mesenchymal-like invasive program in embryonic stem cells by remodeling H3K9 and H3K36 methylation

scientific article published on 10 October 2013

Massive-scale RNA-Seq analysis of non ribosomal transcriptome in human trisomy 21.

scientific article

On the genome base composition of teleosts: the effect of environment and lifestyle

scientific article

Overproduction of Indole-3-Acetic Acid in Free-Living Rhizobia Induces Transcriptional Changes Resembling Those Occurring in Nodule Bacteroids

scientific article published on 22 March 2016

Preface to the BMC-CIBB 2015-16 special issue.

scientific article published on 9 July 2018

Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics

scientific article published on June 2015

RNASeqGUI: a GUI for analysing RNA-Seq data

scientific article

Rebalancing gene haploinsufficiency in vivo by targeting chromatin.

scientific article published on 03 June 2016

Resampling hierarchical processes in the wavelet domain: A case study using atmospheric turbulence

Short interspersed DNA elements and miRNAs: a novel hidden gene regulation layer in zebrafish?

scientific article published on 12 September 2015

Statistical approaches to use a model organism for regulatory sequences annotation of newly sequenced species

scientific article

StructuRly: A novel shiny app to produce comprehensive, detailed and interactive plots for population genetic analysis

scientific article published on 19 February 2020

The footprint of metabolism in the organization of mammalian genomes

scientific article (publication date: 8 May 2012)

The phenotypic variations of multi-locus imprinting disturbances associated with maternal-effect variants of NLRP5 range from overt imprinting disorder to apparently healthy phenotype

scientific article published on 11 December 2019

The rhizosphere-competent entomopathogen Metarhizium anisopliae expresses a specific subset of genes in plant root exudate

scientific article published on 14 October 2010

Transcription alterations of KCNQ1 associated with imprinted methylation defects in the Beckwith-Wiedemann locus

scientific article published on 12 January 2019

Uncovering the complexity of transcriptomes with RNA-Seq.

scientific article

Understanding gene regulatory mechanisms by integrating ChIP-seq and RNA-seq data: statistical solutions to biological problems

scientific article

Vitamin C and l-Proline Antagonistic Effects Capture Alternative States in the Pluripotency Continuum

scientific article published on 19 December 2016

ZFP57 maintains the parent-of-origin-specific expression of the imprinted genes and differentially affects non-imprinted targets in mouse embryonic stem cells

scientific article published on June 2016

ZFP57 recognizes multiple and closely spaced sequence motif variants to maintain repressive epigenetic marks in mouse embryonic stem cells

scientific article published on 19 October 2015

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