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List of works by Dmitri B. Papkovsky

A cell viability assay based on monitoring respiration by optical oxygen sensing

scientific article published on 01 February 2000

A low-volume platform for cell-respirometric screening based on quenched-luminescence oxygen sensing

scientific article published in June 2004

A novel effect of DMOG on cell metabolism: direct inhibition of mitochondrial function precedes HIF target gene expression.

scientific article published on 2 July 2015

An Assessment of the Influence of the Industry Distribution Chain on the Oxygen Levels in Commercial Modified Atmosphere Packaged Cheddar Cheese Using Non-Destructive Oxygen Sensor Technology

scientific article published on 20 June 2016

An immunosensor based on the glucose oxidase label and optical oxygen detection

scientific article published in April 1999

Analysis of activity and inhibition of oxygen-dependent enzymes by optical respirometry on the LightCycler system

scientific article published on 20 October 2009

Analysis of close proximity quenching of phosphorescent metalloporphyrin labels in oligonucleotide structures

scientific article published on 20 December 2006

Analysis of intracellular oxygen and metabolic responses of mammalian cells by time-resolved fluorometry

scientific article published on 15 November 2007

Analysis of mitochondrial function using phosphorescent oxygen-sensitive probes

scientific article published on 01 January 2006

Analysis of total aerobic viable counts in raw fish by high-throughput optical oxygen respirometry

scientific article published on 01 May 2011

Assessment of Cellular Oxygen Gradients with a Panel of Phosphorescent Oxygen-Sensitive Probes

scientific article published on February 29, 2012

Assessment of Performance of the Industrial Process of Bulk Vacuum Packaging of Raw Meat with Nondestructive Optical Oxygen Sensing Systems.

scientific article published on 2 May 2018

Availability of the key metabolic substrates dictates the respiratory response of cancer cells to the mitochondrial uncoupling

scientific article published on 23 July 2013

Bafilomycin A1 activates HIF-dependent signalling in human colon cancer cells via mitochondrial uncoupling

scientific article

Bafilomycin A1 activates respiration of neuronal cells via uncoupling associated with flickering depolarization of mitochondria

scientific article published on September 6, 2010

Biological detection by optical oxygen sensing

scientific article published on November 21, 2013

Cell energy budget platform for assessment of cell metabolism

scientific article

Cell-penetrating conjugates of coproporphyrins with oligoarginine peptides: rational design and application for sensing intracellular O2.

scientific article

Cellular ROS imaging with hydro-Cy3 dye is strongly influenced by mitochondrial membrane potential.

scientific article published on 3 November 2016

Chronic hypoxia leads to a glycolytic phenotype and suppressed HIF-2 signaling in PC12 cells.

scientific article published on 24 February 2013

Comparative bioenergetic assessment of transformed cells using a cell energy budget platform

scientific article published on 17 October 2011

Comparison of the three optical platforms for measurement of cellular respiration.

scientific article published on 16 September 2014

Complexes of Ir(III)-octaethylporphyrin with peptides as probes for sensing cellular O2.

scientific article published on 24 April 2012

Defensive Mutualism Rescues NADPH Oxidase Inactivation in Gut Infection

scientific article published on May 2016

Development and validation of a colorimetric sensor array for fish spoilage monitoring

article

Development of a respirometric biochip for embryo assessment

scientific article published on 6 September 2006

Differential contribution of key metabolic substrates and cellular oxygen in HIF signalling.

scientific article published on 15 October 2014

Dynamics of intracellular oxygen in PC12 Cells upon stimulation of neurotransmission.

scientific article

Dysregulation of hypoxia pathways in fumarate hydratase-deficient cells is independent of defective mitochondrial metabolism.

scientific article published on 21 July 2010

Evaluation of the derivates of phosphorescent Pt-coproporphyrin as intracellular oxygen-sensitive probes

scientific article published on 10 January 2010

Evaluation of the phosphorescent palladium(II)-coproporphyrin labels in separation-free hybridization assays

scientific article published on 01 September 2003

Extracellular calcium depletion transiently elevates oxygen consumption in neurosecretory PC12 cells through activation of mitochondrial Na+/Ca2+ exchange

scientific article published on 13 June 2010

Fluorescence based oxygen uptake analysis in the study of metabolic responses to apoptosis induction

scientific article

Fluorescence-based cell viability screening assays using water-soluble oxygen probes

scientific article

G2019S leucine-rich repeat kinase 2 causes uncoupling protein-mediated mitochondrial depolarization

scientific article

Genome-wide investigation of cellular targets and mode of action of the antifungal bacterial metabolite 2,4-diacetylphloroglucinol in Saccharomyces cerevisiae.

scientific article published on 5 March 2013

GreenLight Model 960.

scientific article published in March 2013

HRG-1 enhances cancer cell invasive potential and couples glucose metabolism to cytosolic/extracellular pH gradient regulation by the vacuolar-H(+) ATPase.

scientific article published on 21 October 2013

Homogeneous assays for cellular proteases employing the platinum(II)-coproporphyrin label and time-resolved phosphorescence

scientific article published in July 2005

Homogeneous time-resolved fluorescence assays for the detection of activity and inhibition of phosphatase enzymes employing phosphorescently labeled peptide substrates

scientific article published on 21 October 2006

Hypothermia protects brain mitochondrial function from hypoxemia in a murine model of sepsis

scientific article

Imaging of cellular oxygen and analysis of metabolic responses of mammalian cells.

scientific article

Imaging of neurosphere oxygenation with phosphorescent probes.

scientific article

Imaging of oxygen and hypoxia in cell and tissue samples

scientific article published on 14 May 2018

Imaging of oxygen gradients in giant umbrella cells: an ex vivo PLIM study.

scientific article published on 5 August 2015

Imaging oxygen in neural cell and tissue models by means of anionic cell-permeable phosphorescent nanoparticles.

scientific article

In Vivo Imaging of Flavoprotein Fluorescence During Hypoxia Reveals the Importance of Direct Arterial Oxygen Supply to Cerebral Cortex Tissue.

scientific article published in January 2016

In vitro analysis of cell metabolism using a long-decay pH-sensitive lanthanide probe and extracellular acidification assay

scientific article published on 18 April 2009

In vitro ischemia decreases histone H4K16 acetylation in neural cells.

scientific article published on 3 December 2014

In vivo imaging of brain metabolism activity using a phosphorescent oxygen-sensitive probe.

scientific article published on 25 April 2013

Intracellular O2 sensing probe based on cell-penetrating phosphorescent nanoparticles.

scientific article

Intracellular probes for imaging oxygen concentration: how good are they?

scientific article published on 21 April 2015

Investigation of drug-induced mitochondrial toxicity using fluorescence-based oxygen-sensitive probes

scientific article published on 25 April 2006

Kinetic analysis of local oxygenation and respiratory responses of mammalian cells using intracellular oxygen-sensitive probes and time-resolved fluorometry

scientific article published in January 2014

Live cell imaging of mouse intestinal organoids reveals heterogeneity in their oxygenation

scientific article published on 3 September 2017

Low energy costs of F1Fo ATP synthase reversal in colon carcinoma cells deficient in mitochondrial complex IV.

scientific article published on 9 February 2017

Measurement of cell respiration and oxygenation in standard multichannel biochips using phosphorescent O2-sensitive probes

scientific article published on 27 June 2013

Metabolic profiling of hypoxic cells revealed a catabolic signature required for cell survival

scientific article

Metallochelate Coupling of Phosphorescent Pt-Porphyrins to Peptides, Proteins, and Self-Assembling Protein Nanoparticles

scientific article published on 24 December 2015

Methods in optical oxygen sensing: protocols and critical analyses

scientific article published on 01 January 2004

Mitochondrial pyrimidine nucleotide carrier (PNC1) regulates mitochondrial biogenesis and the invasive phenotype of cancer cells

scientific article

Mitochondrial toxicity of microcystin-LR on cultured cells: application to the analysis of contaminated water samples

scientific article published in April 2010

Modeling the dynamics of hypoxia inducible factor-1α (HIF-1α) within single cells and 3D cell culture systems

scientific article

Modular microfluidic system as a model of cystic fibrosis airways.

scientific article published on 2 August 2012

Monitoring of cell oxygenation and responses to metabolic stimulation by intracellular oxygen sensing technique

scientific article published on 26 July 2010

Monofunctional derivatives of coproporphyrins for phosphorescent labeling of proteins and binding assays

scientific article published on 01 March 2001

Multi-parametric O₂ imaging in three-dimensional neural cell models with the phosphorescent probes.

scientific article published in January 2015

Multifocal animated imaging of changes in cellular oxygen and calcium concentrations and membrane potential within the intact adult mouse carotid body ex vivo

scientific article published on 27 April 2011

New luminescence lifetime macro-imager based on a Tpx3Cam optical camera

scientific article published on 05 December 2019

Nondestructive and continuous monitoring of oxygen levels in modified atmosphere packaged ready-to-eat mixed salad products using optical oxygen sensors, and its effects on sensory and microbiological counts during storage.

scientific article published on 14 June 2013

O(2)/pH multisensor based on one phosphorescent dye

scientific article published on 30 November 2010

Optical oxygen microrespirometry as a platform for environmental toxicology and animal model studies

scientific article published in July 2005

Optical probes and techniques for O2 measurement in live cells and tissue

scientific article published on January 17, 2012

Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutes

scientific article published on 6 May 2015

Oxygen-sensing scaffolds for 3-dimensional cell and tissue culture

scientific article published on 31 January 2015

Oxygen-sensitive phosphorescent nanomaterials produced from high-density polyethylene films by local solvent-crazing

scientific article published on 22 January 2014

PGC-1alpha is coupled to HIF-1alpha-dependent gene expression by increasing mitochondrial oxygen consumption in skeletal muscle cells

scholarly article

Phosphorescence based O2 sensors - Essential tools for monitoring cell and tissue oxygenation and its impact on metabolism.

scientific article

Phosphorescent Oxygen and Mechanosensitive Nanostructured Materials Based on Hard Elastic Polypropylene Films.

scientific article published on 3 April 2017

Phosphorescent metalloporphyrins as labels in time-resolved luminescence microscopy: effect of mounting on emission intensity

scientific article published on 01 July 2002

Phosphorescent oxygen sensors based on nanostructured polyolefin substrates

scientific article published on 01 January 2010

Planar implantable sensor for in vivo measurement of cellular oxygen metabolism in brain tissue.

scientific article published on 17 February 2017

Quantitative analysis of mucosal oxygenation using ex vivo imaging of healthy and inflamed mammalian colon tissue

scientific article published on 10 August 2016

Rapid detection and respirometric profiling of aerobic bacteria on panels of selective media

scientific article published on 21 November 2012

Respirometric Screening Technology for ADME-Tox studies.

scientific article published on April 2006

Sensing intracellular oxygen using near-infrared phosphorescent probes and live-cell fluorescence imaging

scientific article published on 14 December 2006

Single-cell time-lapse imaging of intracellular O2 in response to metabolic inhibition and mitochondrial cytochrome-c release

scientific article published on June 2017

Spectral-luminescent study of the porphyrin-diketones and their complexes

scientific article

Sulforhodamine Nanothermometer for Multiparametric Fluorescence Lifetime Imaging Microscopy

scientific article published on 10 October 2016

The Ca2+/Mn2+-transporting SPCA2 pump is regulated by oxygen and cell density in colon cancer cells.

scientific article published on 17 June 2016

The use of a fluorescence-based oxygen uptake assay in the analysis of cytotoxicity

scientific article published on 4 January 2006

Toxicological assessment of chemicals using Caenorhabditis elegans and optical oxygen respirometry

scientific article

Toxicological profiling of chemical and environmental samples using panels of test organisms and optical oxygen respirometry

scientific article published in April 2009

Type I cell ROS kinetics under hypoxia in the intact mouse carotid body ex vivo: a FRET-based study.

scientific article published on 15 October 2014

Unusually efficient CUG initiation of an overlapping reading frame in POLG mRNA yields novel protein POLGARF

scientific article published on 21 September 2020

Use of Fluorescence Lifetime Imaging Microscopy (FLIM) as a Timer of Cell Cycle S Phase

scientific article

Versatile Conjugated Polymer Nanoparticles for High-Resolution O2 Imaging in Cells and 3D Tissue Models.

scientific article