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List of works by Kyle Bibby

A Model-Based Framework to Assess the Feasibility of Monitoring Zika Virus with Wastewater-Based Epidemiology

scientific article published in 2023

Arsenic induces structural and compositional colonic microbiome change and promotes host nitrogen and amino acid metabolism.

scientific article published on 31 October 2015

Biogeochemistry of the Antrim Shale Natural Gas Reservoir

scientific article published in 2021

COVID-19 surveillance in Southeastern Virginia using wastewater-based epidemiology

scientific article published on 13 August 2020

Centralized Drinking Water Treatment Operations Shape Bacterial and Fungal Community Structure

scientific article published on 31 May 2017

Challenges of studying viral aerosol metagenomics and communities in comparison with bacterial and fungal aerosols

scientific article published on 23 June 2014

Characterization and biological removal of organic compounds from hydraulic fracturing produced water

scientific article published on 01 February 2019

Clustering of fungal community internal transcribed spacer sequence data obscures taxonomic diversity.

scientific article

Communicating the promise, risks, and ethics of large-scale, open space microbiome and metagenome research

scientific article published on 4 October 2017

Comparison of virus concentration methods for the RT-qPCR-based recovery of murine hepatitis virus, a surrogate for SARS-CoV-2 from untreated wastewater

scientific article published on 05 June 2020

Convergent development of anodic bacterial communities in microbial fuel cells.

scientific article

Correlation of crAssphage qPCR Markers with Culturable and Molecular Indicators of Human Fecal Pollution in an Impacted Urban Watershed

scientific article published on 19 June 2018

Critical issues in application of molecular methods to environmental virology

scientific article published on 16 January 2019

Decay of SARS-CoV-2 and surrogate murine hepatitis virus RNA in untreated wastewater to inform application in wastewater-based epidemiology

scientific article published on 27 August 2020

Disinfection of Ebola Virus in Sterilized Municipal Wastewater

scientific article

Draft Genome Sequence of Methanohalophilus mahii Strain DAL1 Reconstructed from a Hydraulic Fracturing-Produced Water Metagenome.

scientific article published on September 2016

Draft Genome Sequence of Pseudomonas sp. BDAL1 Reconstructed from a Bakken Shale Hydraulic Fracturing-Produced Water Storage Tank Metagenome

scientific article published on 16 March 2017

Efficient Low-pH Iron Removal by a Microbial Iron Oxide Mound Ecosystem at Scalp Level Run.

scientific article published on 13 January 2017

Efflux as a glutaraldehyde resistance mechanism in Pseudomonas fluorescens and Pseudomonas aeruginosa biofilms

scientific article published on 30 March 2015

Environmental sources of community-acquired legionnaires' disease: A review.

scientific article published on 30 April 2018

Evaluation of Phi6 Persistence and Suitability as an Enveloped Virus Surrogate

scientific article published on 28 June 2017

First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: A proof of concept for the wastewater surveillance of COVID-19 in the community

scientific article published on 18 April 2020

Free chlorine and monochloramine inactivation kinetics of Aspergillus and Penicillium in drinking water.

scientific article published on 29 April 2017

From commensalism to mutualism: integrating the microbial ecology, building science, and indoor air communities to advance research on the indoor microbiome

scientific article published in February 2015

Fungal diversity and presence of potentially pathogenic fungi in a hospital hot water system treated with on-site monochloramine.

scientific article published on 8 January 2015

Fungal high-throughput taxonomic identification tool for use with next-generation sequencing (FHiTINGS).

scientific article published on 14 June 2013

Geochemical and Temporal Influences on the Enrichment of Acidophilic Iron-Oxidizing Bacterial Communities

scientific article published on 15 April 2016

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

scientific article published on 08 July 2019

Glutaraldehyde inhibits biological treatment of organic additives in hydraulic fracturing produced water

scientific article published on 14 February 2019

Human occupancy as a source of indoor airborne bacteria

scientific article

Identification accuracy and diversity reproducibility associated with internal transcribed spacer-based fungal taxonomic library preparation.

scientific article

Impact of Disaster Research on the Development of Early Career Researchers: Lessons Learned from the Wastewater Monitoring Pandemic Response Efforts

scientific article published on 07 April 2022

Impacts of Pristine and Transformed Ag and Cu Engineered Nanomaterials on Surficial Sediment Microbial Communities Appear Short-Lived

scientific article published on 3 February 2016

Improved bacteriophage genome data is necessary for integrating viral and bacterial ecology

scientific article

Insights into microbial community structure and function from a shallow, simulated CO2 -leakage aquifer demonstrate microbial selection and adaptation

scientific article published on 05 August 2018

Intestinal Interleukin-17 Receptor Signaling Mediates Reciprocal Control of the Gut Microbiota and Autoimmune Inflammation.

scientific article

Intestinal epithelial Toll-like receptor 4 prevents metabolic syndrome by regulating interactions between microbes and intestinal epithelial cells in mice

scientific article published on 24 January 2018

Lactobacillus rhamnosus HN001 decreases the severity of necrotizing enterocolitis in neonatal mice and preterm piglets: evidence in mice for a role of TLR9.

scientific article

Metatranscriptome analysis of active microbial communities in produced water samples from the Marcellus Shale.

scientific article published on 25 July 2016

Microbial communities in Bakken region produced water

scientific article published on 01 June 2018

Microbial community changes in hydraulic fracturing fluids and produced water from shale gas extraction.

scientific article

Microbial mats as a biological treatment approach for saline wastewaters: the case of produced water from hydraulic fracturing

scientific article

Nitrogen removal from wastewater using a hybrid membrane-biofilm process: pilot-scale studies.

scientific article published in March 2010

Particle size influences decay rates of environmental DNA in aquatic systems

scientific article published in 2023

Particle-size distributions and seasonal diversity of allergenic and pathogenic fungi in outdoor air.

scientific article

Persistence of Antibiotic Resistance Genes Varies with Particle Size and Substrate Conditions in Recirculating Streams

scientific article published in 2023

Persistence of Ebola Virus in Sterilized Wastewater

scientific article

Predominance and Metabolic Potential of Halanaerobium spp. in Produced Water from Hydraulically Fractured Marcellus Shale Wells

scientific article

Prevalence of respiratory adenovirus species B and C in sewage sludge

scientific article published on 28 November 2012

Produced water exposure alters bacterial response to biocides

scientific article published on 22 October 2014

Pulmonary Th17 Antifungal Immunity Is Regulated by the Gut Microbiome

scientific article published on 23 May 2016

Pyrosequencing of the 16S rRNA gene to reveal bacterial pathogen diversity in biosolids.

scientific article

Quantitative CrAssphage PCR Assays for Human Fecal Pollution Measurement

scientific article published on 12 July 2017

Research Needs for Wastewater Handling in Virus Outbreak Response

scientific article published on 14 February 2017

Risks from Ebolavirus Discharge from Hospitals to Sewer Workers.

scientific article published on April 2017

SARS-CoV-2 in wastewater: State of the knowledge and research needs

scientific article published on 30 April 2020

Seasonal Dynamics of the Airborne Bacterial Community and Selected Viruses in a Children's Daycare Center

scientific article

Shift in the microbial ecology of a hospital hot water system following the introduction of an on-site monochloramine disinfection system

scientific article

Suggested reporting parameters for investigations of wastewater from unconventional shale gas extraction.

scientific article

Suppression of methanogenesis in cellulose-fed microbial fuel cells in relation to performance, metabolite formation, and microbial population.

scientific article

Suspended Materials Affect Particle Size Distribution and Removal of Environmental DNA in Flowing Waters

scientific article published in 2023

Ten questions concerning the microbiomes of buildings

The functional potential of microbial communities in hydraulic fracturing source water and produced water from natural gas extraction characterized by metagenomic sequencing

scientific article

Thermodynamic controls on the kinetics of microbial low-pH Fe(II) oxidation.

scientific article

Transcriptome sequencing and annotation of the microalgae Dunaliella tertiolecta: pathway description and gene discovery for production of next-generation biofuels.

scientific article

Wastewater-Based Epidemiology: Global Collaborative to Maximize Contributions in the Fight Against COVID-19

scientific article published on 12 June 2020

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