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List of works by Ji-Zheng He

Abundance and community structure of sulfate reducing prokaryotes in a paddy soil of southern China under different fertilization regimes

article

Adaptive responses of comammox Nitrospira and canonical ammonia oxidizers to long-term fertilizations: Implications for the relative contributions of different ammonia oxidizers to soil nitrogen cycling

scientific article published on 28 February 2019

Aerobic composting reduces antibiotic resistance genes in cattle manure and the resistome dissemination in agricultural soils.

scientific article published on 8 September 2017

Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest.

scientific article

Altitudinal distribution patterns of soil bacterial and archaeal communities along mt. Shegyla on the Tibetan Plateau.

scientific article published on 30 July 2014

Ammonia-Oxidizing Archaea Play a Predominant Role in Acid Soil Nitrification

Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils.

scientific article published in December 2011

Ammonia-oxidizing bacteria and archaea grow under contrasting soil nitrogen conditions

scientific article published on 08 March 2010

Analysis of the microbial community structure by monitoring an Hg methylation gene (hgcA) in paddy soils along an Hg gradient.

scientific article published on 28 February 2014

Antibiotic resistance in urban green spaces mirrors the pattern of industrial distribution

scientific article published on 29 August 2019

Arbuscular mycorrhizal fungi and plant diversity drive restoration of nitrogen‐cycling microbial communities

scientific article published on 19 June 2021

Arsenic and cadmium as predominant factors shaping the distribution patterns of antibiotic resistance genes in polluted paddy soils

scientific article published on 06 December 2019

Assembly processes lead to divergent soil fungal communities within and among 12 forest ecosystems along a latitudinal gradient

scientific article published in 2021

Autotrophic ammonia oxidation by soil thaumarchaea.

scientific article

Biogenic Mn oxides for effective adsorption of Cd from aquatic environment.

scientific article published on 3 April 2009

Biotic and abiotic factors distinctly drive contrasting biogeographic patterns between phyllosphere and soil resistomes in natural ecosystems

scientific article published in 2021

Calling for comprehensive explorations between soil invertebrates and arbuscular mycorrhizas

scientific article published on 26 March 2022

Characteristics of oxytetracycline sorption and potential bioavailability in soils with various physical–chemical properties

scientific article published on 14 January 2012

Characterization of the copper resistance mechanism and bioremediation potential of an Acinetobacter calcoaceticus strain isolated from copper mine sludge

scientific article published on 31 December 2019

Climatic factors have unexpectedly strong impacts on soil bacterial β-diversity in 12 forest ecosystems

scientific article published in 2020

Comammox—a newly discovered nitrification process in the terrestrial nitrogen cycle

Consistent responses of soil microbial taxonomic and functional attributes to mercury pollution across China

article

Copper Pollution Increases the Resistance of Soil Archaeal Community to Changes in Water Regime.

scientific article published on 10 May 2017

Copper pollution decreases the resistance of soil microbial community to subsequent dry-rewetting disturbance.

scientific article published on 19 December 2015

Coupling of soil prokaryotic diversity and plant diversity across latitudinal forest ecosystems

scientific article published on 19 January 2016

Different influences of field aging on nickel toxicity to Folsomia candida in two types of soil.

scientific article published on 19 December 2014

Differential response of archaeal groups to land use change in an acidic red soil.

scientific article

Differentiated Mechanisms of Biochar Mitigating Straw-Induced Greenhouse Gas Emissions in Two Contrasting Paddy Soils

scientific article published on 13 November 2018

Distinct factors drive the diversity and composition of protistan consumers and phototrophs in natural soil ecosystems

scientific article published in 2021

Distribution and Succession Feature of Antibiotic Resistance Genes Along a Soil Development Chronosequence in Urumqi No.1 Glacier of China

scientific article published on 09 July 2019

Distribution and diversity of archaeal communities in selected Chinese soils.

scientific article published on 9 January 2012

Diversity and Distribution Characteristics of Viruses in Soils of a Marine-Terrestrial Ecotone in East China

scientific article

Diversity of herbaceous plants and bacterial communities regulates soil resistome across forest biomes.

scientific article published on 24 April 2018

Do land utilization patterns affect methanotrophic communities in a Chinese upland red soil?

scientific article

Dynamics of sulfate reduction and sulfate-reducing prokaryotes in anaerobic paddy soil amended with rice straw

article

Ecological drivers of biogeographic patterns of soil archaeal community

scientific article

Ectomycorrhizal fungi inoculation alleviates simulated acid rain effects on soil ammonia oxidizers and denitrifiers in Masson pine forest

scientific article published on 28 November 2018

Effect of long-term fertilization on total soil arsenic in China.

scientific article published on May 2010

Effects of Cd and Pb on soil microbial community structure and activities.

scientific article

Effects of Cellular Sorption on Mercury Bioavailability and Methylmercury Production by Desulfovibrio desulfuricans ND132.

scientific article

Effects of dicyandiamide and acetylene on N2O emissions and ammonia oxidizers in a fluvo-aquic soil applied with urea.

scientific article published on 31 August 2016

Effects of different agricultural wastes on the dissipation of PAHs and the PAH-degrading genes in a PAH-contaminated soil

scientific article

Effects of different regeneration scenarios and fertilizer treatments on soil microbial ecology in reclaimed opencast mining areas on the Loess Plateau, China.

scientific article

Effects of long-term fertilization on the diversity of bacterial mercuric reductase gene in a Chinese upland soil.

scientific article

Effects of mercury on reproduction, avoidance, and heat shock protein gene expression of the soil springtail Folsomia candida ⬇️

scientific article published on March 1, 2010

Effects of mercury on the activity and community composition of soil ammonia oxidizers

scientific article

Effects of nitrogen application rate and a nitrification inhibitor dicyandiamide on ammonia oxidizers and N2O emissions in a grazed pasture soil.

scientific article

Effects of nitrogen application rate and a nitrification inhibitor dicyandiamide on methanotroph abundance and methane uptake in a grazed pasture soil

scientific article

Effects of super-absorbent polymers on a soil–wheat (Triticum aestivum L.) system in the field

article published in 2014

Effects of the Nitrification Inhibitor 3,4-Dimethylpyrazole Phosphate on Nitrification and Nitrifiers in Two Contrasting Agricultural Soils

scientific article published on 17 June 2016

Environmental Filtering Process Has More Important Roles than Dispersal Limitation in Shaping Large-Scale Prokaryotic Beta Diversity Patterns of Grassland Soils

scientific article

Environmental filtering controls soil biodiversity in wet tropical ecosystems

scientific article published in 2022

Field-based evidence for consistent responses of bacterial communities to copper contamination in two contrasting agricultural soils.

scientific article

Field-based evidence for copper contamination induced changes of antibiotic resistance in agricultural soils.

scientific article

Fungal networks serve as novel ecological routes for enrichment and dissemination of antibiotic resistance genes as exhibited by microcosm experiments.

scientific article published on 13 November 2017

Genetic and functional diversity of ubiquitous DNA viruses in selected Chinese agricultural soils.

scientific article published on 22 March 2017

Global homogenization of the structure and function in the soil microbiome of urban greenspaces

Harnessing microbiome-based biotechnologies for sustainable mitigation of nitrous oxide emissions.

scientific article published on 11 July 2017

Heterogeneity of archaeal and bacterial ammonia-oxidizing communities in Lake Taihu, China

article

Host Species and Geography Differentiate Honeybee Gut Bacterial Communities by Changing the Relative Contribution of Community Assembly Processes

scientific article published in 2021

Host identity determines plant associated resistomes

scientific article published on 04 December 2019

Impact of long-term fertilization practices on the abundance and composition of soil bacterial communities in Northeast China

article

Impacts of Projected Climate Warming and Wetting on Soil Microbial Communities in Alpine Grassland Ecosystems of the Tibetan Plateau

scientific article published on 9 November 2017

Impacts of reclaimed water irrigation on soil antibiotic resistome in urban parks of Victoria, Australia

scientific article published on 28 December 2015

Influence of rice straw amendment on mercury methylation and nitrification in paddy soils

scientific article published on 26 November 2015

Initial copper stress strengthens the resistance of soil microorganisms to a subsequent copper stress

scientific article

Insight into the Modulation of Dissolved Organic Matter on Microbial Remediation of PAH-Contaminated Soils.

scientific article published on 24 February 2015

Interactive effects of multiple climate change factors on ammonia oxidizers and denitrifiers in a temperate steppe.

scientific article

Intraspecies variation in a widely distributed tree species regulates the responses of soil microbiome to different temperature regimes

scientific article

Iron-Manganese Nodules Harbor Lower Bacterial Diversity and Greater Proportions ofProteobacteriaCompared to Bulk Soils in Four Locations Spanning from North to South China

article

Large-scale patterns of soil antibiotic resistome in Chinese croplands

scientific article published on 02 January 2020

Long-Term Nickel Contamination Increases the Occurrence of Antibiotic Resistance Genes in Agricultural Soils.

scientific article

Long-term nickel exposure altered the bacterial community composition but not diversity in two contrasting agricultural soils.

scientific article published on 3 March 2015

Long-term rice and green manure rotation alters the endophytic bacterial communities of the rice root

scientific article

Longitudinal occurrence of methylmercury in terrestrial ecosystems of the Tibetan Plateau

scientific article

Manure Application Did Not Enrich Antibiotic Resistance Genes in Root Endophytic Bacterial Microbiota of Cherry Radish Plants

scientific article published on 07 January 2020

Microbes influence the fractionation of arsenic in paddy soils with different fertilization regimes.

scientific article published on 19 January 2009

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers

scientific article

Microbial nitrous oxide emissions in dryland ecosystems: mechanisms, microbiome and mitigation.

scientific article

Microbial regulation of natural antibiotic resistance: Understanding the protist-bacteria interactions for evolution of soil resistome

scientific article published on 02 December 2019

Microbial regulation of terrestrial nitrous oxide formation: understanding the biological pathways for prediction of emission rates

scientific article

Multiple elements of soil biodiversity drive ecosystem functions across biomes

scientific article published on 03 February 2020

Multiple factors drive the abundance and diversity of the diazotrophic community in typical farmland soils of China

scientific article published on 01 August 2019

Nitrification Is a Primary Driver of Nitrous Oxide Production in Laboratory Microcosms from Different Land-Use Soils

scientific article published on 9 September 2016

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

article by Hong Di et al published 30 August 2009 in Nature Geoscience

Nitrifier-induced denitrification is an important source of soil nitrous oxide and can be inhibited by a nitrification inhibitor 3,4-dimethylpyrazole phosphate.

scientific article

Nitrogen Addition Decreases Dissimilatory Nitrate Reduction to Ammonium in Rice Paddies.

scientific article published on 17 August 2018

Oxytetracycline and Ciprofloxacin Exposure Altered the Composition of Protistan Consumers in an Agricultural Soil

scientific article published on 17 July 2020

Paenibacillus tibetensis sp. nov., a psychrophilic bacterium isolated from alpine swamp meadow soil.

scientific article

Palaeoclimate explains a unique proportion of the global variation in soil bacterial communities

scientific article published on 07 August 2017

Particle size, charge and colloidal stability of humic acids coprecipitated with Ferrihydrite.

scientific article published on 5 December 2013

Patterns of bacterial diversity along a long-term mercury-contaminated gradient in the paddy soils

scientific article

Phylogenetic clustering increases with elevation for microbes.

scientific article

Plant Diversity Enhances Soil Fungal Diversity and Microbial Resistance to Plant Invasion ⬇️

scientific article published on 11 May 2021

Plant evenness modulates the effect of plant richness on soil bacterial diversity

scientific article published on 18 January 2019

Primary Succession of Nitrogen Cycling Microbial Communities Along the Deglaciated Forelands of Tianshan Mountain, China.

scientific article published on 30 August 2016

Protist communities are more sensitive to nitrogen fertilization than other microorganisms in diverse agricultural soils

scientific article published on 27 February 2019

Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices

article

Response of ammonia-oxidizing archaea and bacteria to long-term industrial effluent-polluted soils, Gujarat, Western India

scientific article published on 20 February 2014

Response of bacterial pdo1, nah, and C12O genes to aged soil PAH pollution in a coke factory area.

scientific article

Responses of activities, abundances and community structures of soil denitrifiers to short-term mercury stress

article

Responses of soil microbial community to nitrogen fertilizer and precipitation regimes in a semi-arid steppe

article

Salinity as a predominant factor modulating the distribution patterns of antibiotic resistance genes in ocean and river beach soils

scientific article published on 01 March 2019

Shifts in the abundance and community structure of soil ammonia oxidizers in a wet sclerophyll forest under long-term prescribed burning.

scientific article

Short-term copper exposure as a selection pressure for antibiotic resistance and metal resistance in an agricultural soil

scientific article published on 18 August 2018

Showcasing microbial ecology research in China

scientific article published on 9 September 2009

Sorption mechanism and distribution of cadmium by different microbial species

scientific article published on 28 February 2019

Temporal changes of antibiotic-resistance genes and bacterial communities in two contrasting soils treated with cattle manure.

scientific article published on 27 December 2015

Temporal succession of soil antibiotic resistance genes following application of swine, cattle and poultry manures spiked with or without antibiotics.

scientific article published on 27 September 2017

Termite mounds reduce soil microbial diversity by filtering rare microbial taxa

scientific article published in 2021

The accumulation of microbial residues and plant lignin phenols are more influenced by fertilization in young than mature subtropical forests

scientific article published in 2022

The global contribution of soil mosses to ecosystem services

The large-scale distribution of ammonia oxidizers in paddy soils is driven by soil pH, geographic distance, and climatic factors.

scientific article

The spatial factor, rather than elevated CO₂, controls the soil bacterial community in a temperate Forest Ecosystem

scientific article

Toxicity of profenofos to the springtail, Folsomia candida, and ammonia-oxidizers in two agricultural soils

scientific article published on 24 February 2012

Transfer of antibiotic resistance from manure-amended soils to vegetable microbiomes

scientific article published on 17 June 2019

Unraveling Microbial Communities Associated with Methylmercury Production in Paddy Soils

scientific article published on 06 November 2018

Water addition regulates the metabolic activity of ammonia oxidizers responding to environmental perturbations in dry subhumid ecosystems.

scientific article published on 9 May 2014

[Effects of Stimulated Nitrogen Deposition on the Bacterial Community Structure of Semiarid Temperate Grassland]

scientific article published on 01 December 2018

[Global change field manipulative experiments and their applications in soil microbial ecology.]

scientific article published on 01 May 2016

[Research advance on molecular ecology of asymbiotic nitrogen fixation microbes.]

scientific article published on 01 October 2017

[Responses of Soil Ammonia Oxidizers to Simulated Warming and Increased Precipitation in a Temperate Steppe of Inner Mongolia]

scientific article published on 01 August 2017

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