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List of works by Francesco Rubino

A microfluidics-based in situ chemotaxis assay to study the behaviour of aquatic microbial communities.

scientific article

A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.)

scientific article published in 2018

An efficient algorithm for approximating geodesic distances in tree space

scientific article published on September 2011

Correction: A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.).

scientific article published on 01 March 2020

CowPI: A Rumen Microbiome Focussed Version of the PICRUSt Functional Inference Software. ⬇️

scientific article

Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome

scientific article

Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome

scientific article published on 01 June 2017

GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity Database

scientific article

HmtDB, a genomic resource for mitochondrion-based human variability studies

scientific article

Human mtDNA site-specific variability values can act as haplogroup markers

Integrating microbial abundance time series with fermentation dynamics of the rumen microbiome via mathematical modelling

scientific article published in 2024

Integrating microbial abundance time series with fermentation dynamics of the rumen microbiome via mathematical modelling

scientific article published on 6 October 2023

Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches

scientific article published on 21 June 2021

PPNEMA: A resource of plant-parasitic nematodes multialigned ribosomal cistrons

scientific article

RegExpBlasting (REB), a Regular Expression Blasting algorithm based on multiply aligned sequences

scientific article published on 16 June 2009

Review: Towards the next-generation models of the rumen microbiome for enhancing predictive power and guiding sustainable production strategies

scientific article published in December 2023

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