List of works - Andrew J. Alverson

A single loss of photosynthesis in the diatom order Bacillariales (Bacillariophyta)

scientific article published on 08 April 2019

Bridging the Rubicon: phylogenetic analysis reveals repeated colonizations of marine and fresh waters by thalassiosiroid diatoms

scientific article published on 22 April 2007

Cytoplasmic male sterility-associated chimeric open reading frames identified by mitochondrial genome sequencing of four Cajanus genotypes

scientific article published on 20 June 2013

Extensive loss of RNA editing sites in rapidly evolving Silene mitochondrial genomes: selection vs. retroprocessing as the driving force

scientific article

Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia.

scientific article

Frequent, phylogenetically local horizontal transfer of the cox1 group I Intron in flowering plant mitochondria.

scientific article published on 03 June 2008

Hoarding and horizontal transfer led to an expanded gene and intron repertoire in the plastid genome of the diatom, Toxarium undulatum (Bacillariophyta).

scientific article

Horizontal transfer of entire genomes via mitochondrial fusion in the angiosperm Amborella.

scientific article

Insights into global planktonic diatom diversity: The importance of comparisons between phylogenetically equivalent units that account for time

article published in 2018

Methods for obtaining and analyzing whole chloroplast genome sequences.

scientific article

Models with unequal transition rates favor marine origins of Cyanobacteria and photosynthetic eukaryotes

scientific article

Next-generation phenomics for the Tree of Life

scientific article (publication date: 26 June 2013)

Origins and Recombination of the Bacterial-Sized Multichromosomal Mitochondrial Genome of Cucumber ⬇️

scientific article published on July 8, 2011

Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids

scientific article

Phylotranscriptomics reveals the reticulate evolutionary history of a widespread diatom species complex

Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates

scientific article

Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene.

scientific article

Resolving Marine–Freshwater Transitions by Diatoms Through a Fog of Gene Tree Discordance

scientific article published in 2023

Serial gene losses and foreign DNA underlie size and sequence variation in the plastid genomes of diatoms

scientific article published on March 2014

Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline

scientific article published in 2022

The "fossilized" mitochondrial genome of Liriodendron tulipifera: ancestral gene content and order, ancestral editing sites, and extraordinarily low mutation rate

scientific article (publication date: 15 April 2013)

The genome of a nonphotosynthetic diatom provides insights into the metabolic shift to heterotrophy and constraints on the loss of photosynthesis

scientific article published on 11 August 2021

The limits of nuclear encoded SSU rDNA for resolving the diatom phylogeny

scientific article (publication date: August 2009)

The mitochondrial genome of the legume Vigna radiata and the analysis of recombination across short mitochondrial repeats

scientific article

Transcriptomic Insights into the Life History of Bolidophytes, the Sister Lineage to Diatoms.

scientific article

Unique role for translation initiation factor 3 in the light color regulation of photosynthetic gene expression

scientific article published on 18 September 2013

List of works by Andrew J. Alverson

A single loss of photosynthesis in the diatom order Bacillariales (Bacillariophyta)

Bridging the Rubicon: phylogenetic analysis reveals repeated colonizations of marine and fresh waters by thalassiosiroid diatoms

Cytoplasmic male sterility-associated chimeric open reading frames identified by mitochondrial genome sequencing of four Cajanus genotypes

Extensive loss of RNA editing sites in rapidly evolving Silene mitochondrial genomes: selection vs. retroprocessing as the driving force

Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia.

Frequent, phylogenetically local horizontal transfer of the cox1 group I Intron in flowering plant mitochondria.

Hoarding and horizontal transfer led to an expanded gene and intron repertoire in the plastid genome of the diatom, Toxarium undulatum (Bacillariophyta).

Horizontal transfer of entire genomes via mitochondrial fusion in the angiosperm Amborella.

Insights into global planktonic diatom diversity: The importance of comparisons between phylogenetically equivalent units that account for time

Methods for obtaining and analyzing whole chloroplast genome sequences.

Models with unequal transition rates favor marine origins of Cyanobacteria and photosynthetic eukaryotes

Next-generation phenomics for the Tree of Life

Origins and Recombination of the Bacterial-Sized Multichromosomal Mitochondrial Genome of Cucumber ⬇️

Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids

Phylotranscriptomics reveals the reticulate evolutionary history of a widespread diatom species complex

Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates

Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene.

Resolving Marine–Freshwater Transitions by Diatoms Through a Fog of Gene Tree Discordance

Serial gene losses and foreign DNA underlie size and sequence variation in the plastid genomes of diatoms

Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline

The "fossilized" mitochondrial genome of Liriodendron tulipifera: ancestral gene content and order, ancestral editing sites, and extraordinarily low mutation rate

The genome of a nonphotosynthetic diatom provides insights into the metabolic shift to heterotrophy and constraints on the loss of photosynthesis

The limits of nuclear encoded SSU rDNA for resolving the diatom phylogeny

The mitochondrial genome of the legume Vigna radiata and the analysis of recombination across short mitochondrial repeats

Transcriptomic Insights into the Life History of Bolidophytes, the Sister Lineage to Diatoms.

Unique role for translation initiation factor 3 in the light color regulation of photosynthetic gene expression