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List of works by Stefanie Wienkoop

A Protein-Linger Strategy Keeps the Plant On-Hold After Rehydration of Drought-Stressed

article

A Proteomic View on the Role of Legume Symbiotic Interactions

scientific article

A Proteomic Workflow Using High-Throughput De Novo Sequencing Towards Complementation of Genome Information for Improved Comparative Crop Science.

scientific article published on January 2016

A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis

scientific article

A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment.

scientific article published in October 2008

Absolute quantification of Medicago truncatula sucrose synthase isoforms and N-metabolism enzymes in symbiotic root nodules and the detection of novel nodule phosphoproteins by mass spectrometry

scientific article published on January 2008

Altered Plant and Nodule Development and Protein S-Nitrosylation in Lotus japonicus Mutants Deficient in S-Nitrosoglutathione Reductases

scientific article published on 01 January 2020

An automated GCxGC-TOF-MS protocol for batch-wise extraction and alignment of mass isotopomer matrixes from differential 13C-labelling experiments: a case study for photoautotrophic-mixotrophic grown Chlamydomonas reinhardtii cells

scientific article

An improved protocol to study the plant cell wall proteome

scientific article

Arabidopsis thaliana as a model organism for plant proteome research ⬇️

scientific article published on 06 August 2010

Automated protein turnover calculations from 15N partial metabolic labeling LC/MS shotgun proteomics data

scientific article

Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction

scientific article

Boosting the globalization of plant proteomics through INPPO: current developments and future prospects

scientific article published on February 2012

Carbon metabolism and bacteroid functioning are involved in the regulation of nitrogen fixation in Medicago truncatula under drought and recovery.

scientific article published on December 2009

Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification

Changes in plastid proteome and structure in arbuscular mycorrhizal roots display a nutrient starvation signature

scientific article published on 25 August 2016

Characterisation by proteomics of peribacteroid space and peribacteroid membrane preparations from pea (Pisum sativum) symbiosomes

scientific article published on 01 March 2002

Comparison between Proteome and Transcriptome Response in Potato (Solanum tuberosum L.) Leaves Following Potato Virus Y (PVY) Infection

scientific article

D-GLYCERATE 3-KINASE, the last unknown enzyme in the photorespiratory cycle in Arabidopsis, belongs to a novel kinase family

scientific article published on 24 June 2005

Different diurnal cycles of expression of two nitrate reductase transcripts in tobacco roots

scientific article published in January 2001

Differential CO2 effect on primary carbon metabolism of flag leaves in durum wheat (Triticum durum Desf.).

scientific article published on 17 June 2015

Drought and Recovery: Independently Regulated Processes Highlighting the Importance of Protein Turnover Dynamics and Translational Regulation in Medicago truncatula.

scientific article

Drought stress provokes the down-regulation of methionine and ethylene biosynthesis pathways in Medicago truncatula roots and nodules.

scientific article published on 6 March 2014

Enrichment of phosphorylated proteins and peptides from complex mixtures using metal oxide/hydroxide affinity chromatography (MOAC).

scientific article

Erratum to: Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction.

scientific article published on 13 March 2017

Evidence for a rhizobia-induced drought stress response strategy in Medicago truncatula

scientific article

Evidence for novel tomato seed allergens: IgE-reactive legumin and vicilin proteins identified by multidimensional protein fractionation-mass spectrometry and in silico epitope modeling

scientific article published in March 2009

From proteomics to systems biology: MAPA, MASS WESTERN, PROMEX, and COVAIN as a user-oriented platform

scientific article published in January 2014

Functional analysis of proteins and protein species using shotgun proteomics and linear mathematics

scientific article published on 03 July 2010

Heat-Treatment-Responsive Proteins in Different Developmental Stages of Tomato Pollen Detected by Targeted Mass Accuracy Precursor Alignment (tMAPA).

scientific article

If the antibody fails--a mass western approach

scientific article published on 14 May 2008

Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in Arabidopsis thaliana

scientific article

Integrative Profiling of Metabolites and Proteins

scientific article published on 01 January 2007

Isolation of cellular membranes from lignin-producing tissues of Norway spruce and analysis of redox enzymes

scientific article published on 31 May 2014

Key metabolic traits of Pisum sativum maintain cell vitality during Didymella pinodes infection: cultivar resistance and the microsymbionts' influence.

scientific article published on 4 March 2017

Label-free quantitative proteomic analysis of tolerance to drought in Pisum sativum.

scientific article published on 19 August 2016

Leghemoglobin is nitrated in functional legume nodules in a tyrosine residue within the heme cavity by a nitrite/peroxide-dependent mechanism.

scientific article

Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins

scientific article published in January 2004

Local inhibition of nitrogen fixation and nodule metabolism in drought-stressed soybean.

scientific article published on 11 April 2013

Long-term iron deficiency: Tracing changes in the proteome of different pea (Pisum sativum L.) cultivars

scientific article

MAPA distinguishes genotype-specific variability of highly similar regulatory protein isoforms in potato tuber.

scientific article published on 26 May 2011

MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data

scientific article (publication date: 2011)

Mass Western for Absolute Quantification of Target Proteins and Considerations About the Instrument of Choice

scientific article published on 01 January 2014

Medicago truncatula and Glycine max: Different Drought Tolerance and Similar Local Response of the Root Nodule Proteome

scientific article

Medicago truncatula proteomics for systems biology: novel rapid shotgun LC-MS approach for relative quantification based on full-scan selective peptide extraction (Selpex).

scientific article

Medicago truncatula root nodule proteome analysis reveals differential plant and bacteroid responses to drought stress.

scientific article published on June 2007

Metabolomics- and proteomics-assisted genome annotation and analysis of the draft metabolic network of Chlamydomonas reinhardtii

scientific article published on May 2008

Microbial symbionts affect Pisum sativum proteome and metabolome under Didymella pinodes infection

scientific article (publication date: June 2016)

Mitochondria are an early target of oxidative modifications in senescing legume nodules

scientific article published on 03 December 2012

Molecular Mechanisms of Tungsten Toxicity Differ for Depending on Nitrogen Regime

scientific article published on 02 April 2019

Neurotoxin localization to ectodermal gland cells uncovers an alternative mechanism of venom delivery in sea anemones

scientific article published on 2 November 2011

Oxidative stress is a consequence, not a cause, of aluminum toxicity in the forage legume Lotus corniculatus

article

Phellem Cell-Wall Components Are Discriminants of Cork Quality in Quercus suber

scientific article published on 30 July 2019

Phytochemical composition of Potentilla anserina L. analyzed by an integrative GC-MS and LC-MS metabolomics platform.

scientific article published on 17 November 2012

Possible Role of Nutritional Priming for Early Salt and Drought Stress Responses in Medicago truncatula.

scientific article

ProMEX – a mass spectral reference database for plant proteomics ⬇️

scientific article published on June 6, 2012

ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites

scientific article

Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms

scientific article published on 19 October 2007

Proteome analysis. Novel proteins identified at the peribacteroid membrane from Lotus japonicus root nodules

scientific article published in March 2003

Proteomic Profiling of the Microsomal Root Fraction: Discrimination of Pisum sativum L. Cultivars and Identification of Putative Root Growth Markers

scientific article published on 2 March 2017

Relative and absolute quantitative shotgun proteomics: targeting low-abundance proteins in Arabidopsis thaliana

scientific article published on 30 March 2006

Rhizobium Impacts on Seed Productivity, Quality, and Protection of Pisum sativum upon Disease Stress Caused by Didymella pinodes: Phenotypic, Proteomic, and Metabolomic Traits.

scientific article published on 15 November 2017

Spectral counting robust on high mass accuracy mass spectrometers

scientific article published on 01 December 2010

Stable isotope labeling of phosphopeptides for multiparallel kinase target analysis and identification of phosphorylation sites

scientific article published in January 2003

Stable isotope-free quantitative shotgun proteomics combined with sample pattern recognition for rapid diagnostics

scientific article published on 01 December 2006

Subcellular Phenotyping: Using Proteomics to Quantitatively Link Subcellular Leaf Protein and Organelle Distribution Analyses of Pisum sativum Cultivars

scientific article published on 17 May 2019

Sulfate is transported at significant rates through the symbiosome membrane and is crucial for nitrogenase biosynthesis

scientific article published on 28 January 2019

Sulfur Transport and Metabolism in Legume Root Nodules

scientific article published on 10 October 2018

System-level network analysis of nitrogen starvation and recovery in Chlamydomonas reinhardtii reveals potential new targets for increased lipid accumulation

scientific article

Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses

scientific article published on 31 March 2010

Targeted quantitative analysis of a diurnal RuBisCO subunit expression and translation profile in Chlamydomonas reinhardtii introducing a novel Mass Western approach

scientific article published on 07 October 2014

The different proteomes of Chlamydomonas reinhardtii

scientific article published on 7 August 2012

The plasma membrane proteome of maize roots grown under low and high iron conditions

scientific article published on 24 January 2013

The quest for tolerant varieties: the importance of integrating "omics" techniques to phenotyping

scientific article

Using ProtMAX to create high-mass-accuracy precursor alignments from label-free quantitative mass spectrometry data generated in shotgun proteomics experiments ⬇️

scientific article published on February 28, 2013

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