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List of works by Daniel Jost

A unified Poland-Scheraga model of oligo- and polynucleotide DNA melting: salt effects and predictive power

scientific article published on February 2009

Assigning function to natural allelic variation via dynamic modeling of gene network induction

scientific article published on 15 January 2018

Bifurcation in epigenetics: implications in development, proliferation, and diseases ⬇️

scientific article published on 23 January 2014

Bubble statistics and positioning in superhelically stressed DNA ⬇️

scientific article published on September 12, 2011

Coupling 1D modifications and 3D nuclear organization: data, models and function

scientific article

Differential spatial and structural organization of the X chromosome underlies dosage compensation in C. elegans

scientific article

Dynamical modeling of the H3K27 epigenetic landscape in mouse embryonic stem cells

scientific article published in 2022

Effect of replication on epigenetic memory and consequences on gene transcription

scientific article published on 17 April 2015

Epigenomics in 3D: importance of long-range spreading and specific interactions in epigenomic maintenance

scientific article published on 22 January 2018

Exploiting Single-Cell Quantitative Data to Map Genetic Variants Having Probabilistic Effects

scientific article (publication date: August 2016)

Genome wide application of DNA melting analysis

scientific article published on 17 December 2008

IC-Finder: inferring robustly the hierarchical organization of chromatin folding

scientific article

Live imaging and biophysical modeling support a button-based mechanism of somatic homolog pairing in <i>Drosophila</i>

scientific article published on 08 June 2021

Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains.

scientific article

PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

scientific article published on 11 May 2020

Perspectives: using polymer modeling to understand the formation and function of nuclear compartments.

scientific article

Prediction of RNA multiloop and pseudoknot conformations from a lattice-based, coarse-grain tertiary structure model

scientific article

Quantitative effect of target translation on small RNA efficacy reveals a novel mode of interaction

scientific article

Regulating the many to benefit the few: role of weak small RNA targets.

scientific article published on April 2013

Small RNA biology is systems biology ⬇️

scientific article published on January 1, 2011

TADs are 3D structural units of higher-order chromosome organization in Drosophila.

scientific article published on 28 February 2018

Temperature dependence of the DNA double helix at the nanoscale: structure, elasticity, and fluctuations.

scientific article published on October 2013

The folding landscape of the epigenome

scientific article published on 4 April 2016

Twist-DNA: computing base-pair and bubble opening probabilities in genomic superhelical DNA.

scientific article published on 17 July 2013

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