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List of works by Erdmann Rapp

A hierarchical structure in the N-glycosylation process governs the N-glycosylation output: prolonged cultivation induces glycoenzymes expression variations that are reflected in the cellular N-glycome but not in the protein and site-specific glycop

scientific article published in 2024

Alterations of the Human Skin N- and O-Glycome in Basal Cell Carcinoma and Squamous Cell Carcinoma

scientific article published on 21 March 2018

Atmospheric pressure free liquid infrared MALDI mass spectrometry: toward a combined ESI/ MALDI-liquid chromatography interface

scientific article

CAP, a new human suspension cell line for influenza virus production.

scientific article

Capillary electrophoresis/mass spectrometry of APTS-labeled glycans for the identification of unknown glycan species in capillary electrophoresis/laser-induced fluorescence systems

scientific article

Colonic metaproteomic signatures of active bacteria and the host in obesity.

scientific article published on 10 August 2015

Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome.

scientific article published on 22 May 2015

Comparative performance of four methods for high-throughput glycosylation analysis of immunoglobulin G in genetic and epidemiological research

scientific article

Comparison of Influenza Virus Particle Purification Using Magnetic Sulfated Cellulose Particles with an Established Centrifugation Method for Analytics

scientific article published on 8 October 2015

Correction to: Enzymatic Synthesis of Glycans and Glycoconjugates

scientific article published on 06 January 2021

DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra.

scientific article published on 7 January 2014

Electrokinetics in Fixed Beds: Experimental Demonstration of Electroosmotic Perfusion We acknowledge support of this work by a Marie Curie Fellowship (for U.T.) under the Training and Mobility of Researchers Program of the EU (ERBFMBI-CT98-3437) and

Enzymatic Synthesis of Glycans and Glycoconjugates

scientific article published on 15 October 2020

Establishment of a five-enzyme cell-free cascade for the synthesis of uridine diphosphate N-acetylglucosamine

scientific article published on 22 July 2018

Exclusive Decoration of Simian Immunodeficiency Virus Env with High-Mannose Type N-Glycans Is Not Compatible with Mucosal Transmission in Rhesus Macaques

scientific article published on 9 September 2015

Ezrin and HNRNP expression correlate with increased virus release rate and early onset of virus-induced apoptosis of MDCK suspension cells

scientific article published on September 2016

Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities.

scientific article published on 07 July 2015

Fritless capillary electrochromatography

scientific article published on 01 January 1999

Functional metagenomics identifies an exosialidase with an inverting catalytic mechanism that defines a new glycoside hydrolase family (GH156)

scientific article published in Journal of Biological Chemistry

Glycan analysis in cell culture-based influenza vaccine production: influence of host cell line and virus strain on the glycosylation pattern of viral hemagglutinin.

scientific article published on 14 May 2009

Glycoproteomic analysis of human fibrinogen reveals novel regions of O-glycosylation

scientific article

Guidelines for reporting the use of capillary electrophoresis in proteomics

scientific article published on 01 July 2010

High-density microcarrier cell cultures for influenza virus production.

scientific article published on 7 January 2011

High-throughput Serum N-Glycomics: Method Comparison and Application to Study Rheumatoid Arthritis and Pregnancy-associated Changes

scientific article published on 21 September 2018

Impact of cultivation conditions on N-glycosylation of influenza virus a hemagglutinin produced in MDCK cell culture.

scientific article

Impact of different influenza cultivation conditions on HA N-Glycosylation

scientific article

Impact of host cell line adaptation on quasispecies composition and glycosylation of influenza A virus hemagglutinin

scientific article

Improved column preparation and performance in capillary electrochromatography

scientific article published on 01 July 2000

Improvement of electrospray stability in negative ion mode for nano-PGC-LC-MS glycoanalysis via post-column make-up flow

scientific article published on 23 November 2018

Improvement of the glycoproteomic toolbox with the discovery of a unique C-terminal cleavage specificity of flavastacin for N-glycosylated asparagine

scientific article published on 12 September 2017

Influence of pressure upon coupling pressurized capillary electrochromatography with nuclear magnetic resonance spectroscopy

scientific article published on 01 July 2001

Inverting family GH156 sialidases define an unusual catalytic motif for glycosidase action

scientific article published on 23 October 2019

MALDI-TOF-MS analysis of sialylated glycans and glycopeptides using 4-chloro-α-cyanocinnamic acid matrix.

scientific article

MDCK and Vero cells for influenza virus vaccine production: a one-to-one comparison up to lab-scale bioreactor cultivation.

scientific article published on 9 July 2010

MIRAGE: the minimum information required for a glycomics experiment

scientific article

MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go.

scientific article published on 7 December 2017

Metaproteome analysis of sewage sludge from membrane bioreactors.

scientific article published on 23 May 2011

Metaproteome analysis of the microbial communities in agricultural biogas plants.

scientific article published on 29 January 2013

Metaproteome analysis to determine the metabolically active part of a thermophilic microbial community producing biogas from agricultural biomass.

scientific article published on 12 June 2012

Metaproteomics of activated sludge from a wastewater treatment plant - a pilot study.

scientific article published on 23 July 2015

Monitoring changes in proteome during stepwise adaptation of a MDCK cell line from adherence to growth in suspension.

scientific article

N-Glycosylation Fingerprinting of Viral Glycoproteins by xCGE-LIF.

scientific article published on January 2015

N-glycan analysis by CGE-LIF: profiling influenza A virus hemagglutinin N-glycosylation during vaccine production

scientific article

Navigating through metaproteomics data: a logbook of database searching

scientific article published on 16 March 2015

One pot synthesis of GDP-mannose by a multi-enzyme cascade for enzymatic assembly of lipid-linked oligosaccharides

scientific article

Optimized workflow for preparation of APTS-labeled N-glycans allowing high-throughput analysis of human plasma glycomes using 48-channel multiplexed CGE-LIF.

scientific article

Plasma N-Glycan Signatures Are Associated With Features of Inflammatory Bowel Diseases

scientific article published on 21 May 2018

ProteoCloud: a full-featured open source proteomics cloud computing pipeline.

scientific article published on 8 January 2013

Proteome analysis of virus-host cell interaction: rabies virus replication in Vero cells in two different media

scientific article published on 15 May 2013

Proteomic tracking and analysis of a bacterial mixed culture

scientific article

Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type

scientific article published on 26 July 2016

Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition.

scientific article published on 8 February 2017

Purification and characterization of hydroquinone dioxygenase from Sphingomonas sp. strain TTNP3

scientific article published on 27 May 2011

Quantitative Assessment of Sialo-Glycoproteins and N-Glycans during Cardiomyogenic Differentiation of Human Induced Pluripotent Stem Cells.

scientific article published on 16 May 2017

Quantitative analysis of cellular proteome alterations in human influenza A virus-infected mammalian cell lines.

scientific article

Quantitative mapping of glycoprotein micro-heterogeneity and macro-heterogeneity: an evaluation of mass spectrometry signal strengths using synthetic peptides and glycopeptides

scientific article published on 01 June 2013

Red-emitting rhodamines with hydroxylated, sulfonated, and phosphorylated dye residues and their use in fluorescence nanoscopy

scientific article published on 11 September 2012

Response of Pseudomonas putida KT2440 to phenol at the level of membrane proteome.

scientific article published on 12 February 2010

Sample prefractionation with liquid isoelectric focusing enables in depth microbial metaproteome analysis of mesophilic and thermophilic biogas plants

scientific article

Searching for a needle in a stack of needles: challenges in metaproteomics data analysis

scientific article

Sialic acid-specific affinity chromatography for the separation of erythropoietin glycoforms using serotonin as a ligand.

scientific article published on 11 January 2016

Sialylation Is Dispensable for Early Murine Embryonic Development in Vitro.

scientific article

Site-specific O-Glycosylation Analysis of Human Blood Plasma Proteins

scientific article published on 23 November 2015

Splitless on-line coupling of capillary high-performance liquid chromatography, capillary electrochromatography and pressurized capillary electrochromatography with nuclear magnetic resonance spectroscopy

scientific article published on 08 July 2003

Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics

scientific article published on January 2016

The Fine Art of Destruction: A Guide to In-Depth Glycoproteomic Analyses-Exploiting the Diagnostic Potential of Fragment Ions

scientific article published on 01 December 2018

The MetaProteomeAnalyzer: a powerful open-source software suite for metaproteomics data analysis and interpretation.

scientific article

The impact of sequence database choice on metaproteomic results in gut microbiota studies

scientific article published on 27 September 2016

The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data.

scientific article published on 22 November 2016

The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting mass-spectrometry-based glycoanalytic data

scientific article

The minimum information required for a glycomics experiment (MIRAGE) project: sample preparation guidelines for reliable reporting of glycomics datasets

scientific article

Toward animal cell culture-based influenza vaccine design: viral hemagglutinin N-glycosylation markedly impacts immunogenicity.

scientific article published on 5 December 2012

Towards personalized diagnostics via longitudinal study of the human plasma N-glycome.

scientific article

Vaccine production: upstream processing with adherent or suspension cell lines.

scientific article published on January 2014

Viewing the proteome: how to visualize proteomics data?

scientific article

Virus-host cell interactions in vaccine production cell lines infected with different human influenza A virus variants: a proteomic approach.

scientific article

glyXalign: high-throughput migration time alignment preprocessing of electrophoretic data retrieved via multiplexed capillary gel electrophoresis with laser-induced fluorescence detection-based glycoprofiling.

scientific article

glyXtoolMS: An Open-Source Pipeline for Semiautomated Analysis of Glycopeptide Mass Spectrometry Data

scientific article published on 25 September 2018

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