List of works by Ovidiu Paun

A nuclear Xdh phylogenetic analysis of yams (Dioscorea: Dioscoreaceae) congruent with plastid trees reveals a new Neotropical lineage

scientific article published in 2018

Adaptive sequence evolution is driven by biotic stress in a pair of orchid species (Dactylorhiza) with distinct ecological optima

scientific article

Altered gene expression and ecological divergence in sibling allopolyploids of Dactylorhiza (Orchidaceae)

scientific article

Amplified fragment length polymorphism: an invaluable fingerprinting technique for genomic, transcriptomic, and epigenetic studies

scientific article

Analyses of amplified fragment length polymorphisms (AFLP) indicate rapid radiation of Diospyros species (Ebenaceae) endemic to New Caledonia

scientific article

BsRADseq: screening DNA methylation in natural populations of non-model species.

scientific article published on 28 January 2016

Current research frontiers in plant epigenetics: an introduction to a Virtual Issue

scientific article published on 01 April 2020

Early diversification and permeable species boundaries in the Mediterranean firs

scientific article published on 01 March 2020

Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

scientific article published on 12 October 2017

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

article

Environmental heterogeneity and phenotypic divergence: can heritable epigenetic variation aid speciation?

scientific article

Epigenetic information – Unexplored source of natural variation ⬇️

scientific article published in December 2011

Evolution of hypervariable microsatellites in apomictic polyploid lineages of Ranunculus carpaticola: directional bias at dinucleotide loci

scientific article published on 18 June 2006

Genetic and Epigenetic Alterations after Hybridization and Genome Doubling

scientific article (publication date: August 2007)

Genetic differentiation and admixture between sibling allopolyploids in the Dactylorhiza majalis complex

scientific article published on 07 December 2016

Genetic differentiation and admixture between sibling allopolyploids in the Dactylorhiza majalis complex.

scientific article published on 25 November 2015

Genetic diversity and population structure in natural populations of Moroccan Atlas cedar (Cedrus atlantica; Pinaceae) determined with cpSSR markers

scientific article published on September 2006

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities

scientific article

Genomic analyses suggest parallel ecological divergence in Heliosperma pusillum (Caryophyllaceae).

scientific article published on 07 August 2017

Historical divergence vs. contemporary gene flow: evolutionary history of the calcicole Ranunculus alpestris group (Ranunculaceae) in the European Alps and the Carpathians

scientific article

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants

scientific article

Hybrid speciation in angiosperms: parental divergence drives ploidy

scientific article published on 11 February 2008

Hybridization and speciation in angiosperms: a role for pollinator shifts?

scientific article

ITS polymorphisms shed light on hybrid evolution in apomictic plants: a case study on the Ranunculus auricomus complex

scientific article

Integrating restriction site-associated DNA sequencing (RAD-seq) with morphological cladistic analysis clarifies evolutionary relationships among major species groups of bee orchids.

scientific article

Iterative allogamy-autogamy transitions drive actual and incipient speciation during the ongoing evolutionary radiation within the orchid genus Epipactis (Orchidaceae)

scientific article published on 01 October 2019

Long-term isolation of European steppe outposts boosts the biome's conservation value

scientific article published on 23 April 2020

Molecular phylogenomics of the tribe Shoreeae (Dipterocarpaceae) using whole plastid genomes.

scientific article published in May 2019

Opportunities and limitations of reduced representation bisulfite sequencing in plant ecological epigenomics

article

Orchid colonization: multiple parallel dispersal events and mosaic genetic structure in Dactylorhiza majalis ssp. lapponica on the Baltic island of Gotland

scientific article published on 01 November 2018

Parental divergence and hybrid speciation in angiosperms revisited.

scientific article published on October 2011

Patterns, sources and ecological implications of clonal diversity in apomictic Ranunculus carpaticola (Ranunculus auricomus complex, Ranunculaceae).

scientific article published in April 2006

Phylogenetic Relationships and Biogeography of Ranunculus and Allied Genera (Ranunculaceae) in the Mediterranean Region and in the European Alpine System

scientific article (publication date: November 2005)

Phylogenetic relationships and evolutionary traits in Ranunculus s.l. (Ranunculaceae) inferred from ITS sequence analysis

scientific article (publication date: August 2005)

Phylogenetic relationships within Orchidaceae based on a low-copy nuclear coding gene, Xdh: Congruence with organellar and nuclear ribosomal DNA results

scientific article

Phylogenomic Relationships of Diploids and the Origins of Allotetraploids in Dactylorhiza (Orchidaceae)

scientific article published on 01 January 2020

Phylogenomics resolves evolutionary relationships and provides insights into floral evolution in the tribe Shoreeae (Dipterocarpaceae)

scientific article published on 17 May 2018

Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data ⬇️

scientific article published on 23 January 2023

Pleistocene distribution range shifts were accompanied by breeding system divergence within Hornungia alpina (Brassicaceae) in the Alps

scientific article published on 18 August 2009

Population structure in Neotropical plants: Integrating pollination biology, topography and climatic niches

scientific article published on 17 February 2022

Processes Driving the Adaptive Radiation of a Tropical Tree (Diospyros, Ebenaceae) in New Caledonia, a Biodiversity Hotspot

scientific article

Recurrent allopolyploidizations diversify ecophysiological traits in marsh orchids (<i>Dactylorhiza majalis</i>s.l.)

scientific article published in 2023

Restriction-site associated DNA sequencing supports a sister group relationship of Nigritella and Gymnadenia (Orchidaceae)

scientific article published on 23 March 2019

Sequencing of whole plastid genomes and nuclear ribosomal DNA of Diospyros species (Ebenaceae) endemic to New Caledonia: many species, little divergence

scientific article

Spatial and Ecological Drivers of Genetic Structure in Greek Populations of <i>Alkanna tinctoria</i> (Boraginaceae), a Polyploid Medicinal Herb

scientific article published on 14 July 2021

Stable epigenetic effects impact adaptation in allopolyploid orchids (Dactylorhiza: Orchidaceae)

scientific article

Taxon‐specific or universal? Using target capture to study the evolutionary history of rapid radiations

scientific article published in 2021

The Evolutionary History of New Zealand Deschampsia Is Marked by Long-Distance Dispersal, Endemism, and Hybridization

scientific article published in 2021

The role of hybridization, polyploidization and glaciation in the origin and evolution of the apomictic Ranunculus cassubicus complex

scientific article

Uncovering the contribution of epigenetics to plant phenotypic variation in Mediterranean ecosystems.

scientific article

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