List of works - Katherine A Dunn

A Robust ANOVA Approach to Estimating a Phylogeny from Multiple Genes

scientific article published on 3 April 2015

A new time-scale for ray-finned fish evolution

scientific article (publication date: 22 February 2007)

BioMiCo: a supervised Bayesian model for inference of microbial community structure.

scientific article

BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities

scientific article

Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment.

scholarly article

Early Changes in Microbial Community Structure Are Associated with Sustained Remission After Nutritional Treatment of Pediatric Crohn's Disease.

scientific article

Functional Divergence of the Nuclear Receptor NR2C1 as a Modulator of Pluripotentiality During Hominid Evolution

scientific article

Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices

scientific article (publication date: 2013)

Investigating the gut microbial community and genes in children with differing levels of change in serum asparaginase activity during pegaspargase treatment for acute lymphoblastic leukemia

scientific article published on 01 December 2020

Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution

scientific article published on 26 June 2008

Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data.

scientific article

Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.

scientific article

Multilocus genotyping assays for single nucleotide polymorphism-based subtyping of Listeria monocytogenes isolates.

scientific article published on 17 October 2008

Novel Strategies for Applied Metagenomics.

scientific article published on 4 February 2016

Phylogenomic analysis of natural selection pressure in Streptococcus genomes

scientific article

Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept".

scientific article

Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton.

scientific article published on 22 September 2014

The Gut Microbiome of Pediatric Crohn's Disease Patients Differs from Healthy Controls in Genes That Can Influence the Balance Between a Healthy and Dysregulated Immune Response

scientific article

List of works by Katherine A Dunn

A Robust ANOVA Approach to Estimating a Phylogeny from Multiple Genes

A new time-scale for ray-finned fish evolution

BioMiCo: a supervised Bayesian model for inference of microbial community structure.

BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities

Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment.

Early Changes in Microbial Community Structure Are Associated with Sustained Remission After Nutritional Treatment of Pediatric Crohn's Disease.

Functional Divergence of the Nuclear Receptor NR2C1 as a Modulator of Pluripotentiality During Hominid Evolution

Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices

Investigating the gut microbial community and genes in children with differing levels of change in serum asparaginase activity during pegaspargase treatment for acute lymphoblastic leukemia

Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution

Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data.

Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.

Multilocus genotyping assays for single nucleotide polymorphism-based subtyping of Listeria monocytogenes isolates.

Novel Strategies for Applied Metagenomics.

Phylogenomic analysis of natural selection pressure in Streptococcus genomes

Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept".

Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton.

The Gut Microbiome of Pediatric Crohn's Disease Patients Differs from Healthy Controls in Genes That Can Influence the Balance Between a Healthy and Dysregulated Immune Response